RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 MAGI2Q86UL8 1455 aa16.46■□□□□ 0.23
SLC48A1-206ENST00000548498 RANGAP1P46060 587 aaPredicted RBP16.43■□□□□ 0.22
SLC48A1-206ENST00000548498 CERKQ8TCT0 537 aa16.43■□□□□ 0.22
SLC48A1-206ENST00000548498 EEA1Q15075 1411 aa16.43■□□□□ 0.22
SLC48A1-206ENST00000548498 LRRIQ1Q96JM4 1722 aa16.42■□□□□ 0.22
SLC48A1-206ENST00000548498 KIF14Q15058 1648 aa16.41■□□□□ 0.22
SLC48A1-206ENST00000548498 PLEKHD1A6NEE1 506 aa16.41■□□□□ 0.22
SLC48A1-206ENST00000548498 MLECQ14165 292 aa16.41■□□□□ 0.22
SLC48A1-206ENST00000548498 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
SLC48A1-206ENST00000548498 C3P01024 1663 aa16.4■□□□□ 0.22
SLC48A1-206ENST00000548498 SCAPERQ9BY12 1400 aa16.39■□□□□ 0.21
SLC48A1-206ENST00000548498 C9orf84Q5VXU9 1444 aa16.38■□□□□ 0.21
SLC48A1-206ENST00000548498 SETD1BQ9UPS6 1966 aaKnown RBP16.38■□□□□ 0.21
SLC48A1-206ENST00000548498 ATP10AO60312 1499 aa16.37■□□□□ 0.21
SLC48A1-206ENST00000548498 KDM5CP41229 1560 aa16.37■□□□□ 0.21
SLC48A1-206ENST00000548498 DIP2CQ9Y2E4 1556 aa16.37■□□□□ 0.21
SLC48A1-206ENST00000548498 ABCA6Q8N139 1617 aa16.37■□□□□ 0.21
SLC48A1-206ENST00000548498 PLCH2O75038 1416 aa16.36■□□□□ 0.21
SLC48A1-206ENST00000548498 SPATA31D1Q6ZQQ2 1576 aa16.36■□□□□ 0.21
SLC48A1-206ENST00000548498 CDC42BPBQ9Y5S2 1711 aa16.36■□□□□ 0.21
SLC48A1-206ENST00000548498 ILDR2Q71H61 639 aa16.33■□□□□ 0.2
SLC48A1-206ENST00000548498 CEBPAP49715 358 aaPredicted RBP16.32■□□□□ 0.2
SLC48A1-206ENST00000548498 REREQ9P2R6 1566 aa16.32■□□□□ 0.2
SLC48A1-206ENST00000548498 ITSN2Q9NZM3 1697 aa16.31■□□□□ 0.2
SLC48A1-206ENST00000548498 DISP3Q9P2K9 1392 aa16.31■□□□□ 0.2
SLC48A1-206ENST00000548498 ZNF518AQ6AHZ1 1483 aa16.3■□□□□ 0.2
SLC48A1-206ENST00000548498 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
SLC48A1-206ENST00000548498 UHRF1BP1Q6BDS2 1440 aa16.29■□□□□ 0.2
SLC48A1-206ENST00000548498 PREX2Q70Z35 1606 aa16.29■□□□□ 0.2
SLC48A1-206ENST00000548498 LTBP4Q8N2S1 1624 aa16.27■□□□□ 0.2
SLC48A1-206ENST00000548498 KIDINS220Q9ULH0 1771 aa16.26■□□□□ 0.19
SLC48A1-206ENST00000548498 CDC42BPAQ5VT25 1732 aa16.25■□□□□ 0.19
SLC48A1-206ENST00000548498 ABCC1P33527 1531 aa16.24■□□□□ 0.19
SLC48A1-206ENST00000548498 SUPT6HQ7KZ85 1726 aaKnown RBP16.24■□□□□ 0.19
SLC48A1-206ENST00000548498 ARHGAP35Q9NRY4 1499 aa16.23■□□□□ 0.19
SLC48A1-206ENST00000548498 SOCS7O14512 581 aa16.23■□□□□ 0.19
SLC48A1-206ENST00000548498 MROH2AA6NES4 1674 aa16.23■□□□□ 0.19
SLC48A1-206ENST00000548498 PTPRTO14522 1441 aa16.22■□□□□ 0.19
SLC48A1-206ENST00000548498 TROQ12816 1431 aaPredicted RBP16.22■□□□□ 0.19
SLC48A1-206ENST00000548498 EFCAB2Q5VUJ9 269 aa16.22■□□□□ 0.19
SLC48A1-206ENST00000548498 AGLP35573 1532 aa16.22■□□□□ 0.19
SLC48A1-206ENST00000548498 FMN1Q68DA7 1419 aa16.21■□□□□ 0.19
SLC48A1-206ENST00000548498 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
SLC48A1-206ENST00000548498 MLH3Q9UHC1 1453 aa16.21■□□□□ 0.19
SLC48A1-206ENST00000548498 AFAP1Q8N556 730 aa16.2■□□□□ 0.18
SLC48A1-206ENST00000548498 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
SLC48A1-206ENST00000548498 ZNF142P52746 1687 aaPredicted RBP16.18■□□□□ 0.18
SLC48A1-206ENST00000548498 ATP1B4Q9UN42 357 aaPredicted RBP16.18■□□□□ 0.18
SLC48A1-206ENST00000548498 NCOA1Q15788 1441 aa16.18■□□□□ 0.18
SLC48A1-206ENST00000548498 IQSEC2Q5JU85 1478 aa16.17■□□□□ 0.18
SLC48A1-206ENST00000548498 CAMSAP1Q5T5Y3 1602 aa16.17■□□□□ 0.18
SLC48A1-206ENST00000548498 MYO3AQ8NEV4 1616 aa16.17■□□□□ 0.18
SLC48A1-206ENST00000548498 CLIP1P30622 1438 aa16.17■□□□□ 0.18
SLC48A1-206ENST00000548498 TRAPPC8Q9Y2L5 1435 aa16.17■□□□□ 0.18
SLC48A1-206ENST00000548498 CLTCQ00610 1675 aaKnown RBP16.17■□□□□ 0.18
SLC48A1-206ENST00000548498 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
SLC48A1-206ENST00000548498 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
SLC48A1-206ENST00000548498 MYT1LQ9UL68 1186 aa16.13■□□□□ 0.17
SLC48A1-206ENST00000548498 CDK11AQ9UQ88 783 aaPredicted RBP16.12■□□□□ 0.17
SLC48A1-206ENST00000548498 CNTLNQ9NXG0 1405 aa16.11■□□□□ 0.17
SLC48A1-206ENST00000548498 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
SLC48A1-206ENST00000548498 PLXNC1O60486 1568 aa16.09■□□□□ 0.17
SLC48A1-206ENST00000548498 INO80Q9ULG1 1556 aaPredicted RBP16.09■□□□□ 0.17
SLC48A1-206ENST00000548498 CEP170BQ9Y4F5 1589 aaPredicted RBP16.09■□□□□ 0.17
SLC48A1-206ENST00000548498 POLR1AO95602 1720 aaPredicted RBP16.08■□□□□ 0.16
SLC48A1-206ENST00000548498 NPATQ14207 1427 aa16.07■□□□□ 0.16
SLC48A1-206ENST00000548498 CCDC18Q5T9S5 1454 aa16.07■□□□□ 0.16
SLC48A1-206ENST00000548498 ATP7AQ04656 1500 aa16.06■□□□□ 0.16
SLC48A1-206ENST00000548498 UBTFP17480 764 aaKnown RBP16.06■□□□□ 0.16
SLC48A1-206ENST00000548498 ESF1Q9H501 851 aaKnown RBP16.05■□□□□ 0.16
SLC48A1-206ENST00000548498 ADGBQ8N7X0 1667 aa16.04■□□□□ 0.16
SLC48A1-206ENST00000548498 CASKIN1Q8WXD9 1431 aa16.03■□□□□ 0.16
SLC48A1-206ENST00000548498 ZNF335Q9H4Z2 1342 aaPredicted RBP16.03■□□□□ 0.16
SLC48A1-206ENST00000548498 PLA2R1Q13018 1463 aa16.03■□□□□ 0.16
SLC48A1-206ENST00000548498 TCOF1Q13428 1488 aaKnown RBP16.02■□□□□ 0.15
SLC48A1-206ENST00000548498 NCKAP5LQ9HCH0 1330 aa16.01■□□□□ 0.15
SLC48A1-206ENST00000548498 ZMYM3Q14202 1370 aa16■□□□□ 0.15
SLC48A1-206ENST00000548498 MED1Q15648 1581 aaPredicted RBP16■□□□□ 0.15
SLC48A1-206ENST00000548498 DNMT1P26358 1616 aaKnown RBP15.99■□□□□ 0.15
SLC48A1-206ENST00000548498 PTPRKQ15262 1439 aa15.99■□□□□ 0.15
SLC48A1-206ENST00000548498 GPATCH8Q9UKJ3 1502 aaKnown RBP15.99■□□□□ 0.15
SLC48A1-206ENST00000548498 FYCO1Q9BQS8 1478 aa15.98■□□□□ 0.15
SLC48A1-206ENST00000548498 NEURL4Q96JN8 1562 aa15.98■□□□□ 0.15
SLC48A1-206ENST00000548498 A2MP01023 1474 aa15.97■□□□□ 0.15
SLC48A1-206ENST00000548498 UBAP1LF5GYI3 381 aa15.96■□□□□ 0.15
SLC48A1-206ENST00000548498 ZNF777Q9ULD5 760 aaPredicted RBP15.95■□□□□ 0.14
SLC48A1-206ENST00000548498 SPAG9O60271 1321 aaKnown RBP15.94■□□□□ 0.14
SLC48A1-206ENST00000548498 HNRNPMP52272 730 aaKnown RBP eCLIP15.92■□□□□ 0.14
SLC48A1-206ENST00000548498 TIAM1Q13009 1591 aa15.92■□□□□ 0.14
SLC48A1-206ENST00000548498 A2ML1A8K2U0 1454 aa15.91■□□□□ 0.14
SLC48A1-206ENST00000548498 KIAA1107Q9UPP5 1409 aa15.91■□□□□ 0.14
SLC48A1-206ENST00000548498 PLEKHH2Q8IVE3 1493 aa15.91■□□□□ 0.14
SLC48A1-206ENST00000548498 PKD2Q13563 968 aa15.9■□□□□ 0.14
SLC48A1-206ENST00000548498 ALKQ9UM73 1620 aa15.9■□□□□ 0.14
SLC48A1-206ENST00000548498 STRCP1A6NGW2 1772 aa15.9■□□□□ 0.14
SLC48A1-206ENST00000548498 CPS1P31327 1500 aa15.89■□□□□ 0.13
SLC48A1-206ENST00000548498 VWDEQ8N2E2 1590 aa15.88■□□□□ 0.13
SLC48A1-206ENST00000548498 PPP6R1Q9UPN7 881 aa15.88■□□□□ 0.13
SLC48A1-206ENST00000548498 GGT6Q6P531 493 aa15.87■□□□□ 0.13
SLC48A1-206ENST00000548498 HSPA1LP34931 641 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms