RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 CCNB3Q8WWL7 1395 aa18.32■□□□□ 0.52
TUBA1C-203ENST00000548470 MAGI2Q86UL8 1455 aa18.32■□□□□ 0.52
TUBA1C-203ENST00000548470 MYO5CQ9NQX4 1742 aa18.32■□□□□ 0.52
TUBA1C-203ENST00000548470 CFDP1Q9UEE9 299 aaPredicted RBP18.31■□□□□ 0.52
TUBA1C-203ENST00000548470 EHBP1L1Q8N3D4 1523 aa18.31■□□□□ 0.52
TUBA1C-203ENST00000548470 GPATCH8Q9UKJ3 1502 aaKnown RBP18.3■□□□□ 0.52
TUBA1C-203ENST00000548470 PPARGC1BQ86YN6 1023 aaKnown RBP18.28■□□□□ 0.52
TUBA1C-203ENST00000548470 POGZQ7Z3K3 1410 aa18.28■□□□□ 0.52
TUBA1C-203ENST00000548470 TIAM1Q13009 1591 aa18.27■□□□□ 0.52
TUBA1C-203ENST00000548470 KDM4FA0A1W2PPD8 638 aa18.27■□□□□ 0.52
TUBA1C-203ENST00000548470 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
TUBA1C-203ENST00000548470 PLEKHH2Q8IVE3 1493 aa18.26■□□□□ 0.51
TUBA1C-203ENST00000548470 ZMYM4Q5VZL5 1548 aa18.25■□□□□ 0.51
TUBA1C-203ENST00000548470 PREX2Q70Z35 1606 aa18.25■□□□□ 0.51
TUBA1C-203ENST00000548470 ZNF777Q9ULD5 760 aaPredicted RBP18.25■□□□□ 0.51
TUBA1C-203ENST00000548470 LRRC9Q6ZRR7 1453 aa18.25■□□□□ 0.51
TUBA1C-203ENST00000548470 FRMPD1Q5SYB0 1578 aa18.25■□□□□ 0.51
TUBA1C-203ENST00000548470 KIAA1107Q9UPP5 1409 aa18.24■□□□□ 0.51
TUBA1C-203ENST00000548470 AFAP1Q8N556 730 aa18.24■□□□□ 0.51
TUBA1C-203ENST00000548470 RICTORQ6R327 1708 aa18.23■□□□□ 0.51
TUBA1C-203ENST00000548470 RSPH4AQ5TD94 716 aa18.22■□□□□ 0.51
TUBA1C-203ENST00000548470 CDC42BPBQ9Y5S2 1711 aa18.22■□□□□ 0.51
TUBA1C-203ENST00000548470 NCOA2Q15596 1464 aa18.21■□□□□ 0.51
TUBA1C-203ENST00000548470 KANK4Q5T7N3 995 aaPredicted RBP18.2■□□□□ 0.5
TUBA1C-203ENST00000548470 CDC42BPAQ5VT25 1732 aa18.19■□□□□ 0.5
TUBA1C-203ENST00000548470 MYT1LQ9UL68 1186 aa18.19■□□□□ 0.5
TUBA1C-203ENST00000548470 MLH3Q9UHC1 1453 aa18.19■□□□□ 0.5
TUBA1C-203ENST00000548470 ARID4BQ4LE39 1312 aaPredicted RBP18.19■□□□□ 0.5
TUBA1C-203ENST00000548470 ABCC1P33527 1531 aa18.18■□□□□ 0.5
TUBA1C-203ENST00000548470 ZFYVE16Q7Z3T8 1539 aa18.18■□□□□ 0.5
TUBA1C-203ENST00000548470 SUPT6HQ7KZ85 1726 aaKnown RBP18.18■□□□□ 0.5
TUBA1C-203ENST00000548470 HNRNPMP52272 730 aaKnown RBP eCLIP18.18■□□□□ 0.5
TUBA1C-203ENST00000548470 TRAPPC8Q9Y2L5 1435 aa18.17■□□□□ 0.5
TUBA1C-203ENST00000548470 ATP10AO60312 1499 aa18.17■□□□□ 0.5
TUBA1C-203ENST00000548470 ARHGEF40Q8TER5 1519 aa18.17■□□□□ 0.5
TUBA1C-203ENST00000548470 ARHGEF12Q9NZN5 1544 aa18.17■□□□□ 0.5
TUBA1C-203ENST00000548470 KDM5CP41229 1560 aa18.17■□□□□ 0.5
TUBA1C-203ENST00000548470 YEATS2Q9ULM3 1422 aa18.15■□□□□ 0.5
TUBA1C-203ENST00000548470 SPAG9O60271 1321 aaKnown RBP18.15■□□□□ 0.5
TUBA1C-203ENST00000548470 ITSN2Q9NZM3 1697 aa18.14■□□□□ 0.49
TUBA1C-203ENST00000548470 SAMD9LQ8IVG5 1584 aa18.13■□□□□ 0.49
TUBA1C-203ENST00000548470 C9orf84Q5VXU9 1444 aa18.13■□□□□ 0.49
TUBA1C-203ENST00000548470 MIA2Q96PC5 1412 aa18.13■□□□□ 0.49
TUBA1C-203ENST00000548470 ZNF644Q9H582 1327 aaPredicted RBP18.12■□□□□ 0.49
TUBA1C-203ENST00000548470 HECW2Q9P2P5 1572 aa18.09■□□□□ 0.49
TUBA1C-203ENST00000548470 SYCP2Q9BX26 1530 aa18.09■□□□□ 0.49
TUBA1C-203ENST00000548470 MBD5Q9P267 1494 aa18.09■□□□□ 0.49
TUBA1C-203ENST00000548470 RTEL1-TNFRSF6BF6WH68 1400 aa18.08■□□□□ 0.49
TUBA1C-203ENST00000548470 MYOM3Q5VTT5 1437 aa18.08■□□□□ 0.49
TUBA1C-203ENST00000548470 TSPY4P0CV99 314 aa18.08■□□□□ 0.48
TUBA1C-203ENST00000548470 TSPY10P0CW01 314 aa18.08■□□□□ 0.48
TUBA1C-203ENST00000548470 REREQ9P2R6 1566 aa18.07■□□□□ 0.48
TUBA1C-203ENST00000548470 CAMSAP2Q08AD1 1489 aa18.04■□□□□ 0.48
TUBA1C-203ENST00000548470 CCDC141Q6ZP82 1450 aa18.03■□□□□ 0.48
TUBA1C-203ENST00000548470 AGLP35573 1532 aa18.03■□□□□ 0.48
TUBA1C-203ENST00000548470 BCORL1Q5H9F3 1711 aa18.02■□□□□ 0.48
TUBA1C-203ENST00000548470 DIP2CQ9Y2E4 1556 aa18.02■□□□□ 0.48
TUBA1C-203ENST00000548470 ADAMTSL3P82987 1691 aa18.02■□□□□ 0.47
TUBA1C-203ENST00000548470 ATP7AQ04656 1500 aa18■□□□□ 0.47
TUBA1C-203ENST00000548470 MLECQ14165 292 aa18■□□□□ 0.47
TUBA1C-203ENST00000548470 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
TUBA1C-203ENST00000548470 ARHGEF5Q12774 1597 aa18■□□□□ 0.47
TUBA1C-203ENST00000548470 KIDINS220Q9ULH0 1771 aa17.99■□□□□ 0.47
TUBA1C-203ENST00000548470 ESF1Q9H501 851 aaKnown RBP17.99■□□□□ 0.47
TUBA1C-203ENST00000548470 PTPRMP28827 1452 aa17.98■□□□□ 0.47
TUBA1C-203ENST00000548470 ABCA6Q8N139 1617 aa17.98■□□□□ 0.47
TUBA1C-203ENST00000548470 A2MP01023 1474 aa17.97■□□□□ 0.47
TUBA1C-203ENST00000548470 DHX29Q7Z478 1369 aaKnown RBP17.97■□□□□ 0.47
TUBA1C-203ENST00000548470 FGD6Q6ZV73 1430 aa17.97■□□□□ 0.47
TUBA1C-203ENST00000548470 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.47
TUBA1C-203ENST00000548470 TCOF1Q13428 1488 aaKnown RBP17.93■□□□□ 0.46
TUBA1C-203ENST00000548470 CNTLNQ9NXG0 1405 aa17.92■□□□□ 0.46
TUBA1C-203ENST00000548470 MADDQ8WXG6 1647 aa17.91■□□□□ 0.46
TUBA1C-203ENST00000548470 SIGLEC1Q9BZZ2 1709 aa17.91■□□□□ 0.46
TUBA1C-203ENST00000548470 MAST1Q9Y2H9 1570 aa17.9■□□□□ 0.46
TUBA1C-203ENST00000548470 PTPN23Q9H3S7 1636 aa17.9■□□□□ 0.46
TUBA1C-203ENST00000548470 PLXNC1O60486 1568 aa17.89■□□□□ 0.45
TUBA1C-203ENST00000548470 ADGBQ8N7X0 1667 aa17.89■□□□□ 0.45
TUBA1C-203ENST00000548470 ABCC5O15440 1437 aa17.89■□□□□ 0.45
TUBA1C-203ENST00000548470 GGT6Q6P531 493 aa17.88■□□□□ 0.45
TUBA1C-203ENST00000548470 SHANK2Q9UPX8 1470 aa17.88■□□□□ 0.45
TUBA1C-203ENST00000548470 KIF3BO15066 747 aa17.87■□□□□ 0.45
TUBA1C-203ENST00000548470 FAM50AQ14320 339 aaKnown RBP17.87■□□□□ 0.45
TUBA1C-203ENST00000548470 DAPK1P53355 1430 aa17.86■□□□□ 0.45
TUBA1C-203ENST00000548470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.85■□□□□ 0.451e-9■■■□□ 15.1
TUBA1C-203ENST00000548470 RIMS1Q86UR5 1692 aaKnown RBP17.84■□□□□ 0.45
TUBA1C-203ENST00000548470 ANKRD30AQ9BXX3 1397 aa17.84■□□□□ 0.45
TUBA1C-203ENST00000548470 RRBP1Q9P2E9 1410 aaKnown RBP17.83■□□□□ 0.45
TUBA1C-203ENST00000548470 ZMYM3Q14202 1370 aa17.82■□□□□ 0.44
TUBA1C-203ENST00000548470 FER1L4A9Z1Z3 1794 aa17.81■□□□□ 0.44
TUBA1C-203ENST00000548470 CEBPAP49715 358 aaPredicted RBP17.81■□□□□ 0.44
TUBA1C-203ENST00000548470 RRP7BPQ9NSQ0 103 aa17.81■□□□□ 0.44
TUBA1C-203ENST00000548470 DUOX2Q9NRD8 1548 aa17.81■□□□□ 0.44
TUBA1C-203ENST00000548470 KIF15Q9NS87 1388 aa17.8■□□□□ 0.44
TUBA1C-203ENST00000548470 DNMT1P26358 1616 aaKnown RBP17.8■□□□□ 0.44
TUBA1C-203ENST00000548470 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
TUBA1C-203ENST00000548470 FAM135AQ9P2D6 1515 aa17.8■□□□□ 0.44
TUBA1C-203ENST00000548470 WASHC2CQ9Y4E1 1318 aa17.79■□□□□ 0.44
TUBA1C-203ENST00000548470 TRIM26Q12899 539 aaPredicted RBP17.79■□□□□ 0.44
TUBA1C-203ENST00000548470 NCOA1Q15788 1441 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms