RNA–Protein interactions for RNA: ENST00000548348.1

PCED1B-203, Transcript of PC-esterase domain containing 1B, humanhuman

TSL 5

Gene PCED1B, Length 723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-203ENST00000548348 LMTK3Q96Q04 1460 aa25.27■■□□□ 1.64
PCED1B-203ENST00000548348 FBXO41Q8TF61 875 aa25.22■■□□□ 1.63
PCED1B-203ENST00000548348 ATP1B4Q9UN42 357 aaPredicted RBP25.22■■□□□ 1.63
PCED1B-203ENST00000548348 TROQ12816 1431 aaPredicted RBP25.21■■□□□ 1.63
PCED1B-203ENST00000548348 RIMS1Q86UR5 1692 aaKnown RBP25.2■■□□□ 1.62
PCED1B-203ENST00000548348 ATP10AO60312 1499 aa25.19■■□□□ 1.62
PCED1B-203ENST00000548348 EHMT2Q96KQ7 1210 aa25.17■■□□□ 1.62
PCED1B-203ENST00000548348 CLIP1P30622 1438 aa25.17■■□□□ 1.62
PCED1B-203ENST00000548348 C9orf84Q5VXU9 1444 aa25.17■■□□□ 1.62
PCED1B-203ENST00000548348 KIF14Q15058 1648 aa25.16■■□□□ 1.62
PCED1B-203ENST00000548348 ZNF518AQ6AHZ1 1483 aa25.15■■□□□ 1.62
PCED1B-203ENST00000548348 SIGLEC1Q9BZZ2 1709 aa25.15■■□□□ 1.62
PCED1B-203ENST00000548348 MYO5CQ9NQX4 1742 aa25.15■■□□□ 1.62
PCED1B-203ENST00000548348 ARHGEF12Q9NZN5 1544 aa25.12■■□□□ 1.61
PCED1B-203ENST00000548348 MLECQ14165 292 aa25.1■■□□□ 1.61
PCED1B-203ENST00000548348 ARHGAP5Q13017 1502 aa25.1■■□□□ 1.61
PCED1B-203ENST00000548348 KDM5CP41229 1560 aa25.1■■□□□ 1.61
PCED1B-203ENST00000548348 CASKIN1Q8WXD9 1431 aa25.09■■□□□ 1.61
PCED1B-203ENST00000548348 CCDC18Q5T9S5 1454 aa25.08■■□□□ 1.6
PCED1B-203ENST00000548348 AFAP1Q8N556 730 aa25.07■■□□□ 1.6
PCED1B-203ENST00000548348 HSPA2P54652 639 aa25.06■■□□□ 1.6
PCED1B-203ENST00000548348 MLH3Q9UHC1 1453 aa25.04■■□□□ 1.6
PCED1B-203ENST00000548348 FER1L4A9Z1Z3 1794 aa25.04■■□□□ 1.6
PCED1B-203ENST00000548348 REREQ9P2R6 1566 aa25.02■■□□□ 1.6
PCED1B-203ENST00000548348 PLPPR3Q6T4P5 718 aa25.02■■□□□ 1.6
PCED1B-203ENST00000548348 LRRIQ1Q96JM4 1722 aa25■■□□□ 1.59
PCED1B-203ENST00000548348 DIP2CQ9Y2E4 1556 aa24.97■■□□□ 1.59
PCED1B-203ENST00000548348 FYCO1Q9BQS8 1478 aa24.96■■□□□ 1.59
PCED1B-203ENST00000548348 CDC42BPBQ9Y5S2 1711 aa24.96■■□□□ 1.59
PCED1B-203ENST00000548348 PREX2Q70Z35 1606 aa24.96■■□□□ 1.59
PCED1B-203ENST00000548348 ABCC1P33527 1531 aa24.96■■□□□ 1.59
PCED1B-203ENST00000548348 MYT1LQ9UL68 1186 aa24.95■■□□□ 1.58
PCED1B-203ENST00000548348 AGLP35573 1532 aa24.95■■□□□ 1.58
PCED1B-203ENST00000548348 TRAPPC8Q9Y2L5 1435 aa24.95■■□□□ 1.58
PCED1B-203ENST00000548348 CEBPAP49715 358 aaPredicted RBP24.93■■□□□ 1.58
PCED1B-203ENST00000548348 PREX1Q8TCU6 1659 aa24.91■■□□□ 1.58
PCED1B-203ENST00000548348 ABCA6Q8N139 1617 aa24.9■■□□□ 1.58
PCED1B-203ENST00000548348 CERKQ8TCT0 537 aa24.89■■□□□ 1.58
PCED1B-203ENST00000548348 DMRT2Q9Y5R5 561 aa24.89■■□□□ 1.58
PCED1B-203ENST00000548348 UHRF1BP1Q6BDS2 1440 aa24.88■■□□□ 1.57
PCED1B-203ENST00000548348 ITSN2Q9NZM3 1697 aa24.87■■□□□ 1.57
PCED1B-203ENST00000548348 CNTLNQ9NXG0 1405 aa24.85■■□□□ 1.57
PCED1B-203ENST00000548348 SETD1BQ9UPS6 1966 aaKnown RBP24.84■■□□□ 1.57
PCED1B-203ENST00000548348 ESF1Q9H501 851 aaKnown RBP24.84■■□□□ 1.57
PCED1B-203ENST00000548348 GPATCH8Q9UKJ3 1502 aaKnown RBP24.84■■□□□ 1.57
PCED1B-203ENST00000548348 CDC42BPAQ5VT25 1732 aa24.83■■□□□ 1.57
PCED1B-203ENST00000548348 KIAA1107Q9UPP5 1409 aa24.82■■□□□ 1.56
PCED1B-203ENST00000548348 KIDINS220Q9ULH0 1771 aa24.81■■□□□ 1.56
PCED1B-203ENST00000548348 SAMD9LQ8IVG5 1584 aa24.8■■□□□ 1.56
PCED1B-203ENST00000548348 PLEKHH2Q8IVE3 1493 aa24.79■■□□□ 1.56
PCED1B-203ENST00000548348 SPAG9O60271 1321 aaKnown RBP24.78■■□□□ 1.56
PCED1B-203ENST00000548348 ZNF777Q9ULD5 760 aaPredicted RBP24.77■■□□□ 1.56
PCED1B-203ENST00000548348 CFDP1Q9UEE9 299 aaPredicted RBP24.76■■□□□ 1.55
PCED1B-203ENST00000548348 PTPRTO14522 1441 aa24.76■■□□□ 1.55
PCED1B-203ENST00000548348 C3P01024 1663 aa24.75■■□□□ 1.55
PCED1B-203ENST00000548348 SYCP2Q9BX26 1530 aa24.75■■□□□ 1.55
PCED1B-203ENST00000548348 HNRNPMP52272 730 aaKnown RBP eCLIP24.74■■□□□ 1.55
PCED1B-203ENST00000548348 CCNB3Q8WWL7 1395 aa24.74■■□□□ 1.55
PCED1B-203ENST00000548348 STRCQ7RTU9 1775 aa24.74■■□□□ 1.55
PCED1B-203ENST00000548348 NPATQ14207 1427 aa24.73■■□□□ 1.55
PCED1B-203ENST00000548348 MTUS2Q5JR59 1369 aa24.7■■□□□ 1.55
PCED1B-203ENST00000548348 ATP7AQ04656 1500 aa24.69■■□□□ 1.54
PCED1B-203ENST00000548348 ZMYM3Q14202 1370 aa24.68■■□□□ 1.54
PCED1B-203ENST00000548348 PPP6R1Q9UPN7 881 aa24.67■■□□□ 1.54
PCED1B-203ENST00000548348 PLXNC1O60486 1568 aa24.67■■□□□ 1.54
PCED1B-203ENST00000548348 INO80Q9ULG1 1556 aaPredicted RBP24.67■■□□□ 1.54
PCED1B-203ENST00000548348 MROH2AA6NES4 1674 aa24.66■■□□□ 1.54
PCED1B-203ENST00000548348 A2MP01023 1474 aa24.66■■□□□ 1.54
PCED1B-203ENST00000548348 NCOA1Q15788 1441 aa24.66■■□□□ 1.54
PCED1B-203ENST00000548348 CEP162Q5TB80 1403 aa24.61■■□□□ 1.53
PCED1B-203ENST00000548348 MBD5Q9P267 1494 aa24.61■■□□□ 1.53
PCED1B-203ENST00000548348 EHBP1L1Q8N3D4 1523 aa24.61■■□□□ 1.53
PCED1B-203ENST00000548348 RTEL1-TNFRSF6BF6WH68 1400 aa24.6■■□□□ 1.53
PCED1B-203ENST00000548348 TIAM1Q13009 1591 aa24.58■■□□□ 1.52
PCED1B-203ENST00000548348 IQSEC2Q5JU85 1478 aa24.58■■□□□ 1.52
PCED1B-203ENST00000548348 SUPT6HQ7KZ85 1726 aaKnown RBP24.57■■□□□ 1.52
PCED1B-203ENST00000548348 ZNF644Q9H582 1327 aaPredicted RBP24.57■■□□□ 1.52
PCED1B-203ENST00000548348 PTPRKQ15262 1439 aa24.56■■□□□ 1.52
PCED1B-203ENST00000548348 LTBP4Q8N2S1 1624 aa24.56■■□□□ 1.52
PCED1B-203ENST00000548348 GGT6Q6P531 493 aa24.55■■□□□ 1.52
PCED1B-203ENST00000548348 CAMSAP1Q5T5Y3 1602 aa24.54■■□□□ 1.52
PCED1B-203ENST00000548348 DHX29Q7Z478 1369 aaKnown RBP24.54■■□□□ 1.52
PCED1B-203ENST00000548348 PLA2R1Q13018 1463 aa24.53■■□□□ 1.52
PCED1B-203ENST00000548348 PKD2Q13563 968 aa24.53■■□□□ 1.52
PCED1B-203ENST00000548348 RSPH4AQ5TD94 716 aa24.53■■□□□ 1.52
PCED1B-203ENST00000548348 ADGBQ8N7X0 1667 aa24.53■■□□□ 1.52
PCED1B-203ENST00000548348 CLTCQ00610 1675 aaKnown RBP24.5■■□□□ 1.51
PCED1B-203ENST00000548348 ZNF142P52746 1687 aaPredicted RBP24.48■■□□□ 1.51
PCED1B-203ENST00000548348 TCOF1Q13428 1488 aaKnown RBP24.48■■□□□ 1.51
PCED1B-203ENST00000548348 MYO3AQ8NEV4 1616 aa24.46■■□□□ 1.51
PCED1B-203ENST00000548348 CEP170BQ9Y4F5 1589 aaPredicted RBP24.46■■□□□ 1.51
PCED1B-203ENST00000548348 CCDC141Q6ZP82 1450 aa24.46■■□□□ 1.51
PCED1B-203ENST00000548348 NCKAP5LQ9HCH0 1330 aa24.46■■□□□ 1.51
PCED1B-203ENST00000548348 FAM135AQ9P2D6 1515 aa24.45■■□□□ 1.51
PCED1B-203ENST00000548348 NCOA2Q15596 1464 aa24.45■■□□□ 1.51
PCED1B-203ENST00000548348 A2ML1A8K2U0 1454 aa24.42■■□□□ 1.5
PCED1B-203ENST00000548348 CAMSAP2Q08AD1 1489 aa24.41■■□□□ 1.5
PCED1B-203ENST00000548348 KIF3BO15066 747 aa24.39■■□□□ 1.49
PCED1B-203ENST00000548348 ZNF335Q9H4Z2 1342 aaPredicted RBP24.38■■□□□ 1.49
PCED1B-203ENST00000548348 PZPP20742 1482 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms