RNA–Protein interactions for RNA: ENST00000548232.1

NR4A1-209, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best) BASIC

Gene NR4A1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-209ENST00000548232 MYT1LQ9UL68 1186 aa21.45■■□□□ 1.02
NR4A1-209ENST00000548232 ZFYVE16Q7Z3T8 1539 aa21.45■■□□□ 1.02
NR4A1-209ENST00000548232 FBXO41Q8TF61 875 aa21.44■■□□□ 1.02
NR4A1-209ENST00000548232 MAGI2Q86UL8 1455 aa21.42■■□□□ 1.02
NR4A1-209ENST00000548232 RIMS1Q86UR5 1692 aaKnown RBP21.42■■□□□ 1.02
NR4A1-209ENST00000548232 HECW1Q76N89 1606 aa21.4■■□□□ 1.02
NR4A1-209ENST00000548232 PCF11O94913 1555 aaKnown RBP21.4■■□□□ 1.02
NR4A1-209ENST00000548232 ZMYM4Q5VZL5 1548 aa21.4■■□□□ 1.02
NR4A1-209ENST00000548232 LMTK3Q96Q04 1460 aa21.39■■□□□ 1.02
NR4A1-209ENST00000548232 AFAP1Q8N556 730 aa21.39■■□□□ 1.01
NR4A1-209ENST00000548232 ATP10AO60312 1499 aa21.36■■□□□ 1.01
NR4A1-209ENST00000548232 CLIP1P30622 1438 aa21.36■■□□□ 1.01
NR4A1-209ENST00000548232 TROQ12816 1431 aaPredicted RBP21.36■■□□□ 1.01
NR4A1-209ENST00000548232 CEBPAP49715 358 aaPredicted RBP21.34■■□□□ 1.01
NR4A1-209ENST00000548232 SIGLEC1Q9BZZ2 1709 aa21.33■■□□□ 1.01
NR4A1-209ENST00000548232 ARHGAP5Q13017 1502 aa21.33■■□□□ 1
NR4A1-209ENST00000548232 KIF14Q15058 1648 aa21.33■■□□□ 1
NR4A1-209ENST00000548232 MYO5CQ9NQX4 1742 aa21.31■■□□□ 1
NR4A1-209ENST00000548232 C9orf84Q5VXU9 1444 aa21.3■■□□□ 1
NR4A1-209ENST00000548232 ZNF518AQ6AHZ1 1483 aa21.27■■□□□ 1
NR4A1-209ENST00000548232 ZNF777Q9ULD5 760 aaPredicted RBP21.25■□□□□ 0.99
NR4A1-209ENST00000548232 FER1L4A9Z1Z3 1794 aa21.24■□□□□ 0.99
NR4A1-209ENST00000548232 ESF1Q9H501 851 aaKnown RBP21.24■□□□□ 0.99
NR4A1-209ENST00000548232 CASKIN1Q8WXD9 1431 aa21.23■□□□□ 0.99
NR4A1-209ENST00000548232 ARHGEF12Q9NZN5 1544 aa21.23■□□□□ 0.99
NR4A1-209ENST00000548232 CERKQ8TCT0 537 aa21.2■□□□□ 0.98
NR4A1-209ENST00000548232 LRRIQ1Q96JM4 1722 aa21.2■□□□□ 0.98
NR4A1-209ENST00000548232 TRAPPC8Q9Y2L5 1435 aa21.2■□□□□ 0.98
NR4A1-209ENST00000548232 CCDC18Q5T9S5 1454 aa21.2■□□□□ 0.98
NR4A1-209ENST00000548232 KDM5CP41229 1560 aa21.17■□□□□ 0.98
NR4A1-209ENST00000548232 MLH3Q9UHC1 1453 aa21.16■□□□□ 0.98
NR4A1-209ENST00000548232 CDC42BPBQ9Y5S2 1711 aa21.15■□□□□ 0.98
NR4A1-209ENST00000548232 HNRNPMP52272 730 aaKnown RBP eCLIP21.14■□□□□ 0.97
NR4A1-209ENST00000548232 DMRT2Q9Y5R5 561 aa21.14■□□□□ 0.97
NR4A1-209ENST00000548232 DIP2CQ9Y2E4 1556 aa21.14■□□□□ 0.97
NR4A1-209ENST00000548232 UHRF1BP1Q6BDS2 1440 aa21.12■□□□□ 0.97
NR4A1-209ENST00000548232 PREX2Q70Z35 1606 aa21.11■□□□□ 0.97
NR4A1-209ENST00000548232 SPAG9O60271 1321 aaKnown RBP21.1■□□□□ 0.97
NR4A1-209ENST00000548232 ABCC1P33527 1531 aa21.1■□□□□ 0.97
NR4A1-209ENST00000548232 FYCO1Q9BQS8 1478 aa21.1■□□□□ 0.97
NR4A1-209ENST00000548232 ABCA6Q8N139 1617 aa21.1■□□□□ 0.97
NR4A1-209ENST00000548232 CFDP1Q9UEE9 299 aaPredicted RBP21.09■□□□□ 0.97
NR4A1-209ENST00000548232 PREX1Q8TCU6 1659 aa21.09■□□□□ 0.97
NR4A1-209ENST00000548232 REREQ9P2R6 1566 aa21.06■□□□□ 0.96
NR4A1-209ENST00000548232 GPATCH8Q9UKJ3 1502 aaKnown RBP21.06■□□□□ 0.96
NR4A1-209ENST00000548232 ITSN2Q9NZM3 1697 aa21.05■□□□□ 0.96
NR4A1-209ENST00000548232 AGLP35573 1532 aa21.05■□□□□ 0.96
NR4A1-209ENST00000548232 CCNB3Q8WWL7 1395 aa21.05■□□□□ 0.96
NR4A1-209ENST00000548232 CDC42BPAQ5VT25 1732 aa21.04■□□□□ 0.96
NR4A1-209ENST00000548232 MTUS2Q5JR59 1369 aa21.03■□□□□ 0.96
NR4A1-209ENST00000548232 KIDINS220Q9ULH0 1771 aa21.02■□□□□ 0.96
NR4A1-209ENST00000548232 SAMD9LQ8IVG5 1584 aa21.01■□□□□ 0.95
NR4A1-209ENST00000548232 SYCP2Q9BX26 1530 aa21■□□□□ 0.95
NR4A1-209ENST00000548232 GGT6Q6P531 493 aa21■□□□□ 0.95
NR4A1-209ENST00000548232 CNTLNQ9NXG0 1405 aa21■□□□□ 0.95
NR4A1-209ENST00000548232 C3P01024 1663 aa20.99■□□□□ 0.95
NR4A1-209ENST00000548232 SETD1BQ9UPS6 1966 aaKnown RBP20.99■□□□□ 0.95
NR4A1-209ENST00000548232 ZMYM3Q14202 1370 aa20.98■□□□□ 0.95
NR4A1-209ENST00000548232 ZNF644Q9H582 1327 aaPredicted RBP20.98■□□□□ 0.95
NR4A1-209ENST00000548232 STRCQ7RTU9 1775 aa20.97■□□□□ 0.95
NR4A1-209ENST00000548232 KIAA1107Q9UPP5 1409 aa20.96■□□□□ 0.95
NR4A1-209ENST00000548232 PLEKHH2Q8IVE3 1493 aa20.95■□□□□ 0.94
NR4A1-209ENST00000548232 PTPRTO14522 1441 aa20.94■□□□□ 0.94
NR4A1-209ENST00000548232 NCKAP5LQ9HCH0 1330 aa20.92■□□□□ 0.94
NR4A1-209ENST00000548232 A2MP01023 1474 aa20.92■□□□□ 0.94
NR4A1-209ENST00000548232 ATP7AQ04656 1500 aa20.92■□□□□ 0.94
NR4A1-209ENST00000548232 SUPT6HQ7KZ85 1726 aaKnown RBP20.92■□□□□ 0.94
NR4A1-209ENST00000548232 NPATQ14207 1427 aa20.89■□□□□ 0.94
NR4A1-209ENST00000548232 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
NR4A1-209ENST00000548232 PPP6R1Q9UPN7 881 aa20.85■□□□□ 0.93
NR4A1-209ENST00000548232 CAMSAP1Q5T5Y3 1602 aa20.85■□□□□ 0.93
NR4A1-209ENST00000548232 CEP162Q5TB80 1403 aa20.84■□□□□ 0.93
NR4A1-209ENST00000548232 INO80Q9ULG1 1556 aaPredicted RBP20.84■□□□□ 0.93
NR4A1-209ENST00000548232 CLTCQ00610 1675 aaKnown RBP20.83■□□□□ 0.93
NR4A1-209ENST00000548232 PTPRKQ15262 1439 aa20.82■□□□□ 0.92
NR4A1-209ENST00000548232 KIF3BO15066 747 aa20.82■□□□□ 0.92
NR4A1-209ENST00000548232 MROH2AA6NES4 1674 aa20.82■□□□□ 0.92
NR4A1-209ENST00000548232 DISP3Q9P2K9 1392 aa20.82■□□□□ 0.92
NR4A1-209ENST00000548232 MBD5Q9P267 1494 aa20.81■□□□□ 0.92
NR4A1-209ENST00000548232 TIAM1Q13009 1591 aa20.81■□□□□ 0.92
NR4A1-209ENST00000548232 EHBP1L1Q8N3D4 1523 aa20.81■□□□□ 0.92
NR4A1-209ENST00000548232 PLXNC1O60486 1568 aa20.8■□□□□ 0.92
NR4A1-209ENST00000548232 PKD2Q13563 968 aa20.8■□□□□ 0.92
NR4A1-209ENST00000548232 DHX29Q7Z478 1369 aaKnown RBP20.8■□□□□ 0.92
NR4A1-209ENST00000548232 ZNF335Q9H4Z2 1342 aaPredicted RBP20.79■□□□□ 0.92
NR4A1-209ENST00000548232 LTBP4Q8N2S1 1624 aa20.78■□□□□ 0.92
NR4A1-209ENST00000548232 FBXO31Q5XUX0 539 aaPredicted RBP20.78■□□□□ 0.92
NR4A1-209ENST00000548232 RTEL1-TNFRSF6BF6WH68 1400 aa20.78■□□□□ 0.92
NR4A1-209ENST00000548232 RSPH4AQ5TD94 716 aa20.77■□□□□ 0.92
NR4A1-209ENST00000548232 LOC105371045A0A1W2PR82 267 aa20.76■□□□□ 0.91
NR4A1-209ENST00000548232 TSPY4P0CV99 314 aa20.76■□□□□ 0.91
NR4A1-209ENST00000548232 TSPY10P0CW01 314 aa20.76■□□□□ 0.91
NR4A1-209ENST00000548232 ADGBQ8N7X0 1667 aa20.76■□□□□ 0.91
NR4A1-209ENST00000548232 WASHC2CQ9Y4E1 1318 aa20.76■□□□□ 0.91
NR4A1-209ENST00000548232 NCOA2Q15596 1464 aa20.75■□□□□ 0.91
NR4A1-209ENST00000548232 UBAP1LF5GYI3 381 aa20.75■□□□□ 0.91
NR4A1-209ENST00000548232 ILDR2Q71H61 639 aa20.72■□□□□ 0.91
NR4A1-209ENST00000548232 CEP170BQ9Y4F5 1589 aaPredicted RBP20.72■□□□□ 0.91
NR4A1-209ENST00000548232 MYO3AQ8NEV4 1616 aa20.71■□□□□ 0.91
NR4A1-209ENST00000548232 CAMSAP2Q08AD1 1489 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms