RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 FER1L4A9Z1Z3 1794 aa33.29■■■□□ 2.92
GATC-202ENST00000548171 UBTFP17480 764 aaKnown RBP33.26■■■□□ 2.91
GATC-202ENST00000548171 CDK11AQ9UQ88 783 aaPredicted RBP33.26■■■□□ 2.91
GATC-202ENST00000548171 ARHGAP35Q9NRY4 1499 aa33.23■■■□□ 2.91
GATC-202ENST00000548171 EFCAB2Q5VUJ9 269 aa33.22■■■□□ 2.91
GATC-202ENST00000548171 KIF14Q15058 1648 aa33.21■■■□□ 2.91
GATC-202ENST00000548171 ATP10AO60312 1499 aa33.21■■■□□ 2.91
GATC-202ENST00000548171 ATP1B4Q9UN42 357 aaPredicted RBP33.21■■■□□ 2.91
GATC-202ENST00000548171 C9orf84Q5VXU9 1444 aa33.18■■■□□ 2.9
GATC-202ENST00000548171 MLECQ14165 292 aa33.16■■■□□ 2.9
GATC-202ENST00000548171 PLPPR3Q6T4P5 718 aa33.16■■■□□ 2.9
GATC-202ENST00000548171 ARHGEF12Q9NZN5 1544 aa33.16■■■□□ 2.9
GATC-202ENST00000548171 HSPA2P54652 639 aa33.15■■■□□ 2.9
GATC-202ENST00000548171 ZNF518AQ6AHZ1 1483 aa33.14■■■□□ 2.9
GATC-202ENST00000548171 TROQ12816 1431 aaPredicted RBP33.14■■■□□ 2.9
GATC-202ENST00000548171 EHMT2Q96KQ7 1210 aa33.12■■■□□ 2.89
GATC-202ENST00000548171 CLIP1P30622 1438 aa33.11■■■□□ 2.89
GATC-202ENST00000548171 ARHGAP5Q13017 1502 aa33.11■■■□□ 2.89
GATC-202ENST00000548171 LRRIQ1Q96JM4 1722 aa33.11■■■□□ 2.89
GATC-202ENST00000548171 KDM5CP41229 1560 aa33.09■■■□□ 2.89
GATC-202ENST00000548171 PREX1Q8TCU6 1659 aa33.09■■■□□ 2.89
GATC-202ENST00000548171 CDC42BPBQ9Y5S2 1711 aa33.04■■■□□ 2.88
GATC-202ENST00000548171 REREQ9P2R6 1566 aa33■■■□□ 2.87
GATC-202ENST00000548171 SETD1BQ9UPS6 1966 aaKnown RBP33■■■□□ 2.87
GATC-202ENST00000548171 AFAP1Q8N556 730 aa32.99■■■□□ 2.87
GATC-202ENST00000548171 DIP2CQ9Y2E4 1556 aa32.99■■■□□ 2.87
GATC-202ENST00000548171 PREX2Q70Z35 1606 aa32.98■■■□□ 2.87
GATC-202ENST00000548171 CHIC1Q5VXU3 224 aa32.97■■■□□ 2.87
GATC-202ENST00000548171 CCDC18Q5T9S5 1454 aa32.96■■■□□ 2.87
GATC-202ENST00000548171 MLH3Q9UHC1 1453 aa32.95■■■□□ 2.87
GATC-202ENST00000548171 ABCA6Q8N139 1617 aa32.93■■■□□ 2.86
GATC-202ENST00000548171 CERKQ8TCT0 537 aa32.93■■■□□ 2.86
GATC-202ENST00000548171 MYT1LQ9UL68 1186 aa32.93■■■□□ 2.86
GATC-202ENST00000548171 CASKIN1Q8WXD9 1431 aa32.93■■■□□ 2.86
GATC-202ENST00000548171 ABCC1P33527 1531 aa32.92■■■□□ 2.86
GATC-202ENST00000548171 CEBPAP49715 358 aaPredicted RBP32.91■■■□□ 2.86
GATC-202ENST00000548171 ITSN2Q9NZM3 1697 aa32.91■■■□□ 2.86
GATC-202ENST00000548171 AGLP35573 1532 aa32.87■■■□□ 2.85
GATC-202ENST00000548171 UHRF1BP1Q6BDS2 1440 aa32.87■■■□□ 2.85
GATC-202ENST00000548171 STRCQ7RTU9 1775 aa32.87■■■□□ 2.85
GATC-202ENST00000548171 CDC42BPAQ5VT25 1732 aa32.86■■■□□ 2.85
GATC-202ENST00000548171 DMRT2Q9Y5R5 561 aa32.85■■■□□ 2.85
GATC-202ENST00000548171 C3P01024 1663 aa32.85■■■□□ 2.85
GATC-202ENST00000548171 TRAPPC8Q9Y2L5 1435 aa32.83■■■□□ 2.85
GATC-202ENST00000548171 KIDINS220Q9ULH0 1771 aa32.81■■■□□ 2.84
GATC-202ENST00000548171 FYCO1Q9BQS8 1478 aa32.8■■■□□ 2.84
GATC-202ENST00000548171 ESF1Q9H501 851 aaKnown RBP32.78■■■□□ 2.84
GATC-202ENST00000548171 CNTLNQ9NXG0 1405 aa32.73■■■□□ 2.83
GATC-202ENST00000548171 SAMD9LQ8IVG5 1584 aa32.7■■■□□ 2.82
GATC-202ENST00000548171 PTPRTO14522 1441 aa32.68■■■□□ 2.82
GATC-202ENST00000548171 MROH2AA6NES4 1674 aa32.67■■■□□ 2.82
GATC-202ENST00000548171 SYCP2Q9BX26 1530 aa32.64■■■□□ 2.82
GATC-202ENST00000548171 GPATCH8Q9UKJ3 1502 aaKnown RBP32.64■■■□□ 2.82
GATC-202ENST00000548171 ZNF777Q9ULD5 760 aaPredicted RBP32.62■■■□□ 2.81
GATC-202ENST00000548171 PLEKHH2Q8IVE3 1493 aa32.6■■■□□ 2.81
GATC-202ENST00000548171 SUPT6HQ7KZ85 1726 aaKnown RBP32.6■■■□□ 2.81
GATC-202ENST00000548171 NPATQ14207 1427 aa32.6■■■□□ 2.81
GATC-202ENST00000548171 SPAG9O60271 1321 aaKnown RBP32.59■■■□□ 2.81
GATC-202ENST00000548171 KIAA1107Q9UPP5 1409 aa32.59■■■□□ 2.81
GATC-202ENST00000548171 ATP7AQ04656 1500 aa32.57■■■□□ 2.8
GATC-202ENST00000548171 INO80Q9ULG1 1556 aaPredicted RBP32.56■■■□□ 2.8
GATC-202ENST00000548171 NCOA1Q15788 1441 aa32.55■■■□□ 2.8
GATC-202ENST00000548171 HNRNPMP52272 730 aaKnown RBP eCLIP32.53■■■□□ 2.8
GATC-202ENST00000548171 PLXNC1O60486 1568 aa32.53■■■□□ 2.8
GATC-202ENST00000548171 CFDP1Q9UEE9 299 aaPredicted RBP32.52■■■□□ 2.8
GATC-202ENST00000548171 ZMYM3Q14202 1370 aa32.51■■■□□ 2.79
GATC-202ENST00000548171 CCNB3Q8WWL7 1395 aa32.51■■■□□ 2.79
GATC-202ENST00000548171 LTBP4Q8N2S1 1624 aa32.5■■■□□ 2.79
GATC-202ENST00000548171 CLTCQ00610 1675 aaKnown RBP32.5■■■□□ 2.79
GATC-202ENST00000548171 IQSEC2Q5JU85 1478 aa32.48■■■□□ 2.79
GATC-202ENST00000548171 CAMSAP1Q5T5Y3 1602 aa32.48■■■□□ 2.79
GATC-202ENST00000548171 A2MP01023 1474 aa32.48■■■□□ 2.79
GATC-202ENST00000548171 ADGBQ8N7X0 1667 aa32.46■■■□□ 2.79
GATC-202ENST00000548171 ZNF142P52746 1687 aaPredicted RBP32.45■■■□□ 2.79
GATC-202ENST00000548171 MTUS2Q5JR59 1369 aa32.45■■■□□ 2.78
GATC-202ENST00000548171 MYO3AQ8NEV4 1616 aa32.42■■■□□ 2.78
GATC-202ENST00000548171 PPP6R1Q9UPN7 881 aa32.39■■■□□ 2.78
GATC-202ENST00000548171 TIAM1Q13009 1591 aa32.37■■■□□ 2.77
GATC-202ENST00000548171 DISP3Q9P2K9 1392 aa32.37■■■□□ 2.77
GATC-202ENST00000548171 EHBP1L1Q8N3D4 1523 aa32.36■■■□□ 2.77
GATC-202ENST00000548171 PLA2R1Q13018 1463 aa32.36■■■□□ 2.77
GATC-202ENST00000548171 PTPRKQ15262 1439 aa32.36■■■□□ 2.77
GATC-202ENST00000548171 CEP170BQ9Y4F5 1589 aaPredicted RBP32.36■■■□□ 2.77
GATC-202ENST00000548171 GGT6Q6P531 493 aa32.33■■■□□ 2.77
GATC-202ENST00000548171 MBD5Q9P267 1494 aa32.31■■■□□ 2.76
GATC-202ENST00000548171 PKD2Q13563 968 aa32.31■■■□□ 2.76
GATC-202ENST00000548171 RTEL1-TNFRSF6BF6WH68 1400 aa32.3■■■□□ 2.76
GATC-202ENST00000548171 NCKAP5LQ9HCH0 1330 aa32.29■■■□□ 2.76
GATC-202ENST00000548171 CEP162Q5TB80 1403 aa32.28■■■□□ 2.76
GATC-202ENST00000548171 TCOF1Q13428 1488 aaKnown RBP32.28■■■□□ 2.76
GATC-202ENST00000548171 ZNF644Q9H582 1327 aaPredicted RBP32.27■■■□□ 2.76
GATC-202ENST00000548171 SPATA31D1Q6ZQQ2 1576 aa32.27■■■□□ 2.76
GATC-202ENST00000548171 DHX29Q7Z478 1369 aaKnown RBP32.22■■■□□ 2.75
GATC-202ENST00000548171 ZNF335Q9H4Z2 1342 aaPredicted RBP32.22■■■□□ 2.75
GATC-202ENST00000548171 A2ML1A8K2U0 1454 aa32.21■■■□□ 2.75
GATC-202ENST00000548171 FAM135AQ9P2D6 1515 aa32.21■■■□□ 2.75
GATC-202ENST00000548171 ILDR2Q71H61 639 aa32.2■■■□□ 2.75
GATC-202ENST00000548171 DNMT1P26358 1616 aaKnown RBP32.18■■■□□ 2.74
GATC-202ENST00000548171 CCDC141Q6ZP82 1450 aa32.17■■■□□ 2.74
GATC-202ENST00000548171 SOCS7O14512 581 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms