RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 LRRIQ1Q96JM4 1722 aa14.13□□□□□ -0.15
SMARCC2-205ENST00000548130 ABCA9Q8IUA7 1624 aa14.13□□□□□ -0.15
SMARCC2-205ENST00000548130 COL17A1Q9UMD9 1497 aaPredicted RBP14.12□□□□□ -0.15
SMARCC2-205ENST00000548130 KDM6BO15054 1643 aa14.12□□□□□ -0.15
SMARCC2-205ENST00000548130 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMARCC2-205ENST00000548130 VPS8Q8N3P4 1428 aa14.11□□□□□ -0.15
SMARCC2-205ENST00000548130 TTC37Q6PGP7 1564 aa14.09□□□□□ -0.15
SMARCC2-205ENST00000548130 KIF14Q15058 1648 aa14.08□□□□□ -0.16
SMARCC2-205ENST00000548130 MTUS2Q5JR59 1369 aa14.07□□□□□ -0.16
SMARCC2-205ENST00000548130 PLCH2O75038 1416 aa14.06□□□□□ -0.16
SMARCC2-205ENST00000548130 FANCAO15360 1455 aa14.05□□□□□ -0.16
SMARCC2-205ENST00000548130 NEO1Q92859 1461 aa14.05□□□□□ -0.16
SMARCC2-205ENST00000548130 RAPGEF3O95398 923 aa14.04□□□□□ -0.16
SMARCC2-205ENST00000548130 PHLDB1Q86UU1 1377 aa14.04□□□□□ -0.16
SMARCC2-205ENST00000548130 AKNAQ7Z591 1439 aa14.04□□□□□ -0.16
SMARCC2-205ENST00000548130 EFCAB2Q5VUJ9 269 aa14.03□□□□□ -0.16
SMARCC2-205ENST00000548130 ARAP3Q8WWN8 1544 aa14.02□□□□□ -0.16
SMARCC2-205ENST00000548130 ARHGAP5Q13017 1502 aa14□□□□□ -0.17
SMARCC2-205ENST00000548130 KANK4Q5T7N3 995 aaPredicted RBP13.99□□□□□ -0.17
SMARCC2-205ENST00000548130 TIAM1Q13009 1591 aa13.99□□□□□ -0.17
SMARCC2-205ENST00000548130 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
SMARCC2-205ENST00000548130 DENND4BO75064 1496 aaPredicted RBP13.99□□□□□ -0.17
SMARCC2-205ENST00000548130 CCNB3Q8WWL7 1395 aa13.98□□□□□ -0.17
SMARCC2-205ENST00000548130 APLP2Q06481 763 aa13.98□□□□□ -0.17
SMARCC2-205ENST00000548130 ZNF777Q9ULD5 760 aaPredicted RBP13.98□□□□□ -0.17
SMARCC2-205ENST00000548130 ADGRL1O94910 1474 aa13.98□□□□□ -0.17
SMARCC2-205ENST00000548130 SCAPERQ9BY12 1400 aa13.98□□□□□ -0.17
SMARCC2-205ENST00000548130 GPATCH8Q9UKJ3 1502 aaKnown RBP13.97□□□□□ -0.17
SMARCC2-205ENST00000548130 MYO5CQ9NQX4 1742 aa13.97□□□□□ -0.17
SMARCC2-205ENST00000548130 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
SMARCC2-205ENST00000548130 CFAP74Q9C0B2 1584 aa13.96□□□□□ -0.18
SMARCC2-205ENST00000548130 LRRC9Q6ZRR7 1453 aa13.95□□□□□ -0.18
SMARCC2-205ENST00000548130 CFDP1Q9UEE9 299 aaPredicted RBP13.95□□□□□ -0.18
SMARCC2-205ENST00000548130 FRMPD1Q5SYB0 1578 aa13.94□□□□□ -0.18
SMARCC2-205ENST00000548130 MAP3K1Q13233 1512 aa13.94□□□□□ -0.18
SMARCC2-205ENST00000548130 PREX2Q70Z35 1606 aa13.93□□□□□ -0.18
SMARCC2-205ENST00000548130 NCOA2Q15596 1464 aa13.93□□□□□ -0.18
SMARCC2-205ENST00000548130 POGZQ7Z3K3 1410 aa13.92□□□□□ -0.18
SMARCC2-205ENST00000548130 SLC4A2P04920 1241 aa13.92□□□□□ -0.18
SMARCC2-205ENST00000548130 AFAP1Q8N556 730 aa13.92□□□□□ -0.18
SMARCC2-205ENST00000548130 CDC42BPBQ9Y5S2 1711 aa13.92□□□□□ -0.18
SMARCC2-205ENST00000548130 CDC42BPAQ5VT25 1732 aa13.91□□□□□ -0.18
SMARCC2-205ENST00000548130 ZNF644Q9H582 1327 aaPredicted RBP13.9□□□□□ -0.18
SMARCC2-205ENST00000548130 ARHGEF12Q9NZN5 1544 aa13.9□□□□□ -0.18
SMARCC2-205ENST00000548130 HNRNPMP52272 730 aaKnown RBP eCLIP13.9□□□□□ -0.18
SMARCC2-205ENST00000548130 TRAPPC8Q9Y2L5 1435 aa13.9□□□□□ -0.19
SMARCC2-205ENST00000548130 MYT1LQ9UL68 1186 aa13.89□□□□□ -0.19
SMARCC2-205ENST00000548130 SUPT6HQ7KZ85 1726 aaKnown RBP13.89□□□□□ -0.19
SMARCC2-205ENST00000548130 RICTORQ6R327 1708 aa13.88□□□□□ -0.19
SMARCC2-205ENST00000548130 KDM4FA0A1W2PPD8 638 aa13.88□□□□□ -0.19
SMARCC2-205ENST00000548130 ABCC1P33527 1531 aa13.88□□□□□ -0.19
SMARCC2-205ENST00000548130 YEATS2Q9ULM3 1422 aa13.88□□□□□ -0.19
SMARCC2-205ENST00000548130 SAMD9LQ8IVG5 1584 aa13.87□□□□□ -0.19
SMARCC2-205ENST00000548130 ZNF518AQ6AHZ1 1483 aa13.87□□□□□ -0.19
SMARCC2-205ENST00000548130 ZMYM4Q5VZL5 1548 aa13.85□□□□□ -0.19
SMARCC2-205ENST00000548130 SYCP2Q9BX26 1530 aa13.85□□□□□ -0.19
SMARCC2-205ENST00000548130 KIAA1107Q9UPP5 1409 aa13.85□□□□□ -0.19
SMARCC2-205ENST00000548130 PLEKHH2Q8IVE3 1493 aa13.85□□□□□ -0.19
SMARCC2-205ENST00000548130 ARID4BQ4LE39 1312 aaPredicted RBP13.85□□□□□ -0.19
SMARCC2-205ENST00000548130 ZFYVE16Q7Z3T8 1539 aa13.85□□□□□ -0.19
SMARCC2-205ENST00000548130 SLC4A1APQ9BWU0 796 aaKnown RBP13.84□□□□□ -0.19
SMARCC2-205ENST00000548130 MAGI2Q86UL8 1455 aa13.84□□□□□ -0.19
SMARCC2-205ENST00000548130 PPARGC1BQ86YN6 1023 aaKnown RBP13.83□□□□□ -0.2
SMARCC2-205ENST00000548130 ARHGEF40Q8TER5 1519 aa13.83□□□□□ -0.2
SMARCC2-205ENST00000548130 ITSN2Q9NZM3 1697 aa13.82□□□□□ -0.2
SMARCC2-205ENST00000548130 KDM5CP41229 1560 aa13.82□□□□□ -0.2
SMARCC2-205ENST00000548130 SPAG9O60271 1321 aaKnown RBP13.82□□□□□ -0.2
SMARCC2-205ENST00000548130 MYOM3Q5VTT5 1437 aa13.81□□□□□ -0.2
SMARCC2-205ENST00000548130 CAMSAP2Q08AD1 1489 aa13.8□□□□□ -0.2
SMARCC2-205ENST00000548130 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
SMARCC2-205ENST00000548130 ATP10AO60312 1499 aa13.8□□□□□ -0.2
SMARCC2-205ENST00000548130 MLH3Q9UHC1 1453 aa13.8□□□□□ -0.2
SMARCC2-205ENST00000548130 MLECQ14165 292 aa13.78□□□□□ -0.2
SMARCC2-205ENST00000548130 C9orf84Q5VXU9 1444 aa13.78□□□□□ -0.2
SMARCC2-205ENST00000548130 MIA2Q96PC5 1412 aa13.78□□□□□ -0.2
SMARCC2-205ENST00000548130 HECW2Q9P2P5 1572 aa13.78□□□□□ -0.2
SMARCC2-205ENST00000548130 ILDR1Q86SU0 546 aaPredicted RBP13.77□□□□□ -0.21
SMARCC2-205ENST00000548130 DIP2CQ9Y2E4 1556 aa13.75□□□□□ -0.21
SMARCC2-205ENST00000548130 CCDC141Q6ZP82 1450 aa13.75□□□□□ -0.21
SMARCC2-205ENST00000548130 RSPH4AQ5TD94 716 aa13.75□□□□□ -0.21
SMARCC2-205ENST00000548130 FGD6Q6ZV73 1430 aa13.74□□□□□ -0.21
SMARCC2-205ENST00000548130 KIDINS220Q9ULH0 1771 aa13.73□□□□□ -0.21
SMARCC2-205ENST00000548130 ABCA6Q8N139 1617 aa13.73□□□□□ -0.21
SMARCC2-205ENST00000548130 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
SMARCC2-205ENST00000548130 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
SMARCC2-205ENST00000548130 ATP7AQ04656 1500 aa13.73□□□□□ -0.21
SMARCC2-205ENST00000548130 SIGLEC1Q9BZZ2 1709 aa13.73□□□□□ -0.21
SMARCC2-205ENST00000548130 FAM50AQ14320 339 aaKnown RBP13.71□□□□□ -0.21
SMARCC2-205ENST00000548130 RTEL1-TNFRSF6BF6WH68 1400 aa13.71□□□□□ -0.22
SMARCC2-205ENST00000548130 ARHGEF5Q12774 1597 aa13.71□□□□□ -0.22
SMARCC2-205ENST00000548130 INO80Q9ULG1 1556 aaPredicted RBP13.71□□□□□ -0.22
SMARCC2-205ENST00000548130 CAPN15O75808 1086 aa13.7□□□□□ -0.22
SMARCC2-205ENST00000548130 PTPN23Q9H3S7 1636 aa13.7□□□□□ -0.22
SMARCC2-205ENST00000548130 BCORL1Q5H9F3 1711 aa13.7□□□□□ -0.22
SMARCC2-205ENST00000548130 A2MP01023 1474 aa13.69□□□□□ -0.22
SMARCC2-205ENST00000548130 TCOF1Q13428 1488 aaKnown RBP13.69□□□□□ -0.22
SMARCC2-205ENST00000548130 ABCC5O15440 1437 aa13.69□□□□□ -0.22
SMARCC2-205ENST00000548130 ADAMTSL3P82987 1691 aa13.69□□□□□ -0.22
SMARCC2-205ENST00000548130 REREQ9P2R6 1566 aa13.68□□□□□ -0.22
SMARCC2-205ENST00000548130 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms