RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
SEC23A-204ENST00000548032 RICTORQ6R327 1708 aa23.1■■□□□ 1.29
SEC23A-204ENST00000548032 ILDR1Q86SU0 546 aaPredicted RBP23.09■■□□□ 1.29
SEC23A-204ENST00000548032 POGZQ7Z3K3 1410 aa23.08■■□□□ 1.29
SEC23A-204ENST00000548032 ARID4BQ4LE39 1312 aaPredicted RBP23.07■■□□□ 1.28
SEC23A-204ENST00000548032 PREX2Q70Z35 1606 aa23.04■■□□□ 1.28
SEC23A-204ENST00000548032 ZMYM4Q5VZL5 1548 aa23.03■■□□□ 1.28
SEC23A-204ENST00000548032 ARHGEF40Q8TER5 1519 aa23.03■■□□□ 1.28
SEC23A-204ENST00000548032 YEATS2Q9ULM3 1422 aa23.03■■□□□ 1.28
SEC23A-204ENST00000548032 ZNF777Q9ULD5 760 aaPredicted RBP23.03■■□□□ 1.28
SEC23A-204ENST00000548032 ZFYVE16Q7Z3T8 1539 aa23.03■■□□□ 1.28
SEC23A-204ENST00000548032 CDC42BPBQ9Y5S2 1711 aa23.02■■□□□ 1.28
SEC23A-204ENST00000548032 VPS8Q8N3P4 1428 aa23.02■■□□□ 1.28
SEC23A-204ENST00000548032 AFAP1Q8N556 730 aa23.01■■□□□ 1.27
SEC23A-204ENST00000548032 MYT1LQ9UL68 1186 aa23.01■■□□□ 1.27
SEC23A-204ENST00000548032 CCNB3Q8WWL7 1395 aa23.01■■□□□ 1.27
SEC23A-204ENST00000548032 MAGI2Q86UL8 1455 aa23■■□□□ 1.27
SEC23A-204ENST00000548032 GPATCH8Q9UKJ3 1502 aaKnown RBP23■■□□□ 1.27
SEC23A-204ENST00000548032 CDC42BPAQ5VT25 1732 aa22.99■■□□□ 1.27
SEC23A-204ENST00000548032 ZNF518AQ6AHZ1 1483 aa22.98■■□□□ 1.27
SEC23A-204ENST00000548032 EHBP1L1Q8N3D4 1523 aa22.98■■□□□ 1.27
SEC23A-204ENST00000548032 CFDP1Q9UEE9 299 aaPredicted RBP22.97■■□□□ 1.27
SEC23A-204ENST00000548032 PTPRMP28827 1452 aa22.96■■□□□ 1.27
SEC23A-204ENST00000548032 ABCC1P33527 1531 aa22.96■■□□□ 1.27
SEC23A-204ENST00000548032 ARHGEF12Q9NZN5 1544 aa22.95■■□□□ 1.26
SEC23A-204ENST00000548032 TRAPPC8Q9Y2L5 1435 aa22.95■■□□□ 1.26
SEC23A-204ENST00000548032 ADAMTSL3P82987 1691 aa22.93■■□□□ 1.26
SEC23A-204ENST00000548032 TIAM1Q13009 1591 aa22.93■■□□□ 1.26
SEC23A-204ENST00000548032 KDM5CP41229 1560 aa22.91■■□□□ 1.26
SEC23A-204ENST00000548032 SAMD9LQ8IVG5 1584 aa22.91■■□□□ 1.26
SEC23A-204ENST00000548032 ATP10AO60312 1499 aa22.91■■□□□ 1.26
SEC23A-204ENST00000548032 HNRNPMP52272 730 aaKnown RBP eCLIP22.9■■□□□ 1.26
SEC23A-204ENST00000548032 MLECQ14165 292 aa22.9■■□□□ 1.26
SEC23A-204ENST00000548032 ITSN2Q9NZM3 1697 aa22.9■■□□□ 1.26
SEC23A-204ENST00000548032 BCORL1Q5H9F3 1711 aa22.89■■□□□ 1.26
SEC23A-204ENST00000548032 C9orf84Q5VXU9 1444 aa22.88■■□□□ 1.25
SEC23A-204ENST00000548032 SYCP2Q9BX26 1530 aa22.87■■□□□ 1.25
SEC23A-204ENST00000548032 NCOA2Q15596 1464 aa22.87■■□□□ 1.25
SEC23A-204ENST00000548032 PLEKHH2Q8IVE3 1493 aa22.85■■□□□ 1.25
SEC23A-204ENST00000548032 MLH3Q9UHC1 1453 aa22.85■■□□□ 1.25
SEC23A-204ENST00000548032 SIGLEC1Q9BZZ2 1709 aa22.85■■□□□ 1.25
SEC23A-204ENST00000548032 ZNF644Q9H582 1327 aaPredicted RBP22.85■■□□□ 1.25
SEC23A-204ENST00000548032 LRRC9Q6ZRR7 1453 aa22.85■■□□□ 1.25
SEC23A-204ENST00000548032 MADDQ8WXG6 1647 aa22.84■■□□□ 1.25
SEC23A-204ENST00000548032 SUPT6HQ7KZ85 1726 aaKnown RBP22.84■■□□□ 1.25
SEC23A-204ENST00000548032 KIAA1107Q9UPP5 1409 aa22.83■■□□□ 1.25
SEC23A-204ENST00000548032 KANK4Q5T7N3 995 aaPredicted RBP22.83■■□□□ 1.25
SEC23A-204ENST00000548032 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
SEC23A-204ENST00000548032 DIP2CQ9Y2E4 1556 aa22.82■■□□□ 1.24
SEC23A-204ENST00000548032 APLP2Q06481 763 aa22.82■■□□□ 1.24
SEC23A-204ENST00000548032 PLPPR3Q6T4P5 718 aa22.8■■□□□ 1.24
SEC23A-204ENST00000548032 MAP3K1Q13233 1512 aa22.8■■□□□ 1.24
SEC23A-204ENST00000548032 ABCA6Q8N139 1617 aa22.79■■□□□ 1.24
SEC23A-204ENST00000548032 RIMS1Q86UR5 1692 aaKnown RBP22.77■■□□□ 1.24
SEC23A-204ENST00000548032 KIDINS220Q9ULH0 1771 aa22.76■■□□□ 1.23
SEC23A-204ENST00000548032 CAMSAP2Q08AD1 1489 aa22.73■■□□□ 1.23
SEC23A-204ENST00000548032 LMTK3Q96Q04 1460 aa22.73■■□□□ 1.23
SEC23A-204ENST00000548032 MBD5Q9P267 1494 aa22.73■■□□□ 1.23
SEC23A-204ENST00000548032 REREQ9P2R6 1566 aa22.72■■□□□ 1.23
SEC23A-204ENST00000548032 ATP7AQ04656 1500 aa22.72■■□□□ 1.23
SEC23A-204ENST00000548032 FER1L4A9Z1Z3 1794 aa22.69■■□□□ 1.22
SEC23A-204ENST00000548032 HSPA2P54652 639 aa22.69■■□□□ 1.22
SEC23A-204ENST00000548032 FBXO41Q8TF61 875 aa22.69■■□□□ 1.22
SEC23A-204ENST00000548032 INO80Q9ULG1 1556 aaPredicted RBP22.68■■□□□ 1.22
SEC23A-204ENST00000548032 AGLP35573 1532 aa22.67■■□□□ 1.22
SEC23A-204ENST00000548032 CCDC141Q6ZP82 1450 aa22.66■■□□□ 1.22
SEC23A-204ENST00000548032 ESF1Q9H501 851 aaKnown RBP22.66■■□□□ 1.22
SEC23A-204ENST00000548032 MYOM3Q5VTT5 1437 aa22.65■■□□□ 1.22
SEC23A-204ENST00000548032 A2MP01023 1474 aa22.65■■□□□ 1.22
SEC23A-204ENST00000548032 RSPH4AQ5TD94 716 aa22.64■■□□□ 1.21
SEC23A-204ENST00000548032 CEBPAP49715 358 aaPredicted RBP22.63■■□□□ 1.21
SEC23A-204ENST00000548032 RTEL1-TNFRSF6BF6WH68 1400 aa22.61■■□□□ 1.21
SEC23A-204ENST00000548032 MIA2Q96PC5 1412 aa22.61■■□□□ 1.21
SEC23A-204ENST00000548032 TSPY4P0CV99 314 aa22.6■■□□□ 1.21
SEC23A-204ENST00000548032 TSPY10P0CW01 314 aa22.6■■□□□ 1.21
SEC23A-204ENST00000548032 PLXNC1O60486 1568 aa22.58■■□□□ 1.2
SEC23A-204ENST00000548032 ARHGEF5Q12774 1597 aa22.58■■□□□ 1.2
SEC23A-204ENST00000548032 GGT6Q6P531 493 aa22.57■■□□□ 1.2
SEC23A-204ENST00000548032 ADGBQ8N7X0 1667 aa22.55■■□□□ 1.2
SEC23A-204ENST00000548032 DHX29Q7Z478 1369 aaKnown RBP22.54■■□□□ 1.2
SEC23A-204ENST00000548032 CNTLNQ9NXG0 1405 aa22.53■■□□□ 1.2
SEC23A-204ENST00000548032 FGD6Q6ZV73 1430 aa22.51■■□□□ 1.19
SEC23A-204ENST00000548032 KIF3BO15066 747 aa22.5■■□□□ 1.19
SEC23A-204ENST00000548032 PTPN23Q9H3S7 1636 aa22.49■■□□□ 1.19
SEC23A-204ENST00000548032 C3P01024 1663 aa22.47■■□□□ 1.19
SEC23A-204ENST00000548032 ZMYM3Q14202 1370 aa22.47■■□□□ 1.19
SEC23A-204ENST00000548032 MAST1Q9Y2H9 1570 aa22.46■■□□□ 1.19
SEC23A-204ENST00000548032 ABCC5O15440 1437 aa22.44■■□□□ 1.18
SEC23A-204ENST00000548032 TCOF1Q13428 1488 aaKnown RBP22.44■■□□□ 1.18
SEC23A-204ENST00000548032 CLTCQ00610 1675 aaKnown RBP22.43■■□□□ 1.18
SEC23A-204ENST00000548032 UHRF1BP1Q6BDS2 1440 aa22.43■■□□□ 1.18
SEC23A-204ENST00000548032 PPARGC1BQ86YN6 1023 aaKnown RBP22.43■■□□□ 1.18
SEC23A-204ENST00000548032 CERKQ8TCT0 537 aa22.43■■□□□ 1.18
SEC23A-204ENST00000548032 PPP6R1Q9UPN7 881 aa22.43■■□□□ 1.18
SEC23A-204ENST00000548032 FAM50AQ14320 339 aaKnown RBP22.42■■□□□ 1.18
SEC23A-204ENST00000548032 PREX1Q8TCU6 1659 aa22.42■■□□□ 1.18
SEC23A-204ENST00000548032 DAPK1P53355 1430 aa22.41■■□□□ 1.18
SEC23A-204ENST00000548032 MROH2AA6NES4 1674 aa22.4■■□□□ 1.18
SEC23A-204ENST00000548032 RRP7BPQ9NSQ0 103 aa22.39■■□□□ 1.17
SEC23A-204ENST00000548032 DMRT2Q9Y5R5 561 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms