RNA–Protein interactions for RNA: ENST00000548015.1

KRT18-204, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-204ENST00000548015 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
KRT18-204ENST00000548015 BCORL1Q5H9F3 1711 aa17.93■□□□□ 0.46
KRT18-204ENST00000548015 ZFYVE16Q7Z3T8 1539 aa17.93■□□□□ 0.46
KRT18-204ENST00000548015 RICTORQ6R327 1708 aa17.92■□□□□ 0.46
KRT18-204ENST00000548015 HECW1Q76N89 1606 aa17.91■□□□□ 0.46
KRT18-204ENST00000548015 MADDQ8WXG6 1647 aa17.91■□□□□ 0.46
KRT18-204ENST00000548015 CASKIN1Q8WXD9 1431 aa17.91■□□□□ 0.46
KRT18-204ENST00000548015 ATP10AO60312 1499 aa17.91■□□□□ 0.46
KRT18-204ENST00000548015 HSPA2P54652 639 aa17.91■□□□□ 0.46
KRT18-204ENST00000548015 LMTK3Q96Q04 1460 aa17.9■□□□□ 0.46
KRT18-204ENST00000548015 CFAP74Q9C0B2 1584 aa17.9■□□□□ 0.46
KRT18-204ENST00000548015 CLIP1P30622 1438 aa17.89■□□□□ 0.46
KRT18-204ENST00000548015 KIF14Q15058 1648 aa17.87■□□□□ 0.45
KRT18-204ENST00000548015 CEBPAP49715 358 aaPredicted RBP17.86■□□□□ 0.45
KRT18-204ENST00000548015 C9orf84Q5VXU9 1444 aa17.86■□□□□ 0.45
KRT18-204ENST00000548015 PCF11O94913 1555 aaKnown RBP17.86■□□□□ 0.45
KRT18-204ENST00000548015 ARHGAP5Q13017 1502 aa17.84■□□□□ 0.45
KRT18-204ENST00000548015 ZNF518AQ6AHZ1 1483 aa17.84■□□□□ 0.45
KRT18-204ENST00000548015 TRAPPC8Q9Y2L5 1435 aa17.84■□□□□ 0.45
KRT18-204ENST00000548015 FBXO41Q8TF61 875 aa17.84■□□□□ 0.45
KRT18-204ENST00000548015 SIGLEC1Q9BZZ2 1709 aa17.84■□□□□ 0.45
KRT18-204ENST00000548015 ARHGEF12Q9NZN5 1544 aa17.83■□□□□ 0.45
KRT18-204ENST00000548015 MYT1LQ9UL68 1186 aa17.83■□□□□ 0.44
KRT18-204ENST00000548015 CCDC18Q5T9S5 1454 aa17.81■□□□□ 0.44
KRT18-204ENST00000548015 MLH3Q9UHC1 1453 aa17.8■□□□□ 0.44
KRT18-204ENST00000548015 RIMS1Q86UR5 1692 aaKnown RBP17.78■□□□□ 0.44
KRT18-204ENST00000548015 ZNF777Q9ULD5 760 aaPredicted RBP17.78■□□□□ 0.44
KRT18-204ENST00000548015 KDM5CP41229 1560 aa17.78■□□□□ 0.44
KRT18-204ENST00000548015 FYCO1Q9BQS8 1478 aa17.76■□□□□ 0.43
KRT18-204ENST00000548015 HNRNPMP52272 730 aaKnown RBP eCLIP17.76■□□□□ 0.43
KRT18-204ENST00000548015 GPATCH8Q9UKJ3 1502 aaKnown RBP17.75■□□□□ 0.43
KRT18-204ENST00000548015 MYO5CQ9NQX4 1742 aa17.73■□□□□ 0.43
KRT18-204ENST00000548015 CFDP1Q9UEE9 299 aaPredicted RBP17.73■□□□□ 0.43
KRT18-204ENST00000548015 LRRIQ1Q96JM4 1722 aa17.72■□□□□ 0.43
KRT18-204ENST00000548015 ABCC1P33527 1531 aa17.72■□□□□ 0.43
KRT18-204ENST00000548015 DIP2CQ9Y2E4 1556 aa17.7■□□□□ 0.42
KRT18-204ENST00000548015 SPAG9O60271 1321 aaKnown RBP17.7■□□□□ 0.42
KRT18-204ENST00000548015 AGLP35573 1532 aa17.69■□□□□ 0.42
KRT18-204ENST00000548015 KIAA1107Q9UPP5 1409 aa17.69■□□□□ 0.42
KRT18-204ENST00000548015 CERKQ8TCT0 537 aa17.68■□□□□ 0.42
KRT18-204ENST00000548015 REREQ9P2R6 1566 aa17.68■□□□□ 0.42
KRT18-204ENST00000548015 ZNF644Q9H582 1327 aaPredicted RBP17.68■□□□□ 0.42
KRT18-204ENST00000548015 CCNB3Q8WWL7 1395 aa17.67■□□□□ 0.42
KRT18-204ENST00000548015 CDC42BPBQ9Y5S2 1711 aa17.67■□□□□ 0.42
KRT18-204ENST00000548015 ESF1Q9H501 851 aaKnown RBP17.67■□□□□ 0.42
KRT18-204ENST00000548015 MTUS2Q5JR59 1369 aa17.66■□□□□ 0.42
KRT18-204ENST00000548015 PREX2Q70Z35 1606 aa17.66■□□□□ 0.42
KRT18-204ENST00000548015 ABCA6Q8N139 1617 aa17.65■□□□□ 0.42
KRT18-204ENST00000548015 UHRF1BP1Q6BDS2 1440 aa17.64■□□□□ 0.41
KRT18-204ENST00000548015 SAMD9LQ8IVG5 1584 aa17.62■□□□□ 0.41
KRT18-204ENST00000548015 FER1L4A9Z1Z3 1794 aa17.62■□□□□ 0.41
KRT18-204ENST00000548015 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
KRT18-204ENST00000548015 ZMYM3Q14202 1370 aa17.62■□□□□ 0.41
KRT18-204ENST00000548015 CEP162Q5TB80 1403 aa17.61■□□□□ 0.41
KRT18-204ENST00000548015 SYCP2Q9BX26 1530 aa17.61■□□□□ 0.41
KRT18-204ENST00000548015 CNTLNQ9NXG0 1405 aa17.6■□□□□ 0.41
KRT18-204ENST00000548015 PLEKHH2Q8IVE3 1493 aa17.6■□□□□ 0.41
KRT18-204ENST00000548015 LOC105371045A0A1W2PR82 267 aa17.59■□□□□ 0.41
KRT18-204ENST00000548015 KIDINS220Q9ULH0 1771 aa17.58■□□□□ 0.41
KRT18-204ENST00000548015 MBD5Q9P267 1494 aa17.58■□□□□ 0.41
KRT18-204ENST00000548015 GGT6Q6P531 493 aa17.58■□□□□ 0.4
KRT18-204ENST00000548015 ITSN2Q9NZM3 1697 aa17.58■□□□□ 0.4
KRT18-204ENST00000548015 CDC42BPAQ5VT25 1732 aa17.57■□□□□ 0.4
KRT18-204ENST00000548015 A2MP01023 1474 aa17.56■□□□□ 0.4
KRT18-204ENST00000548015 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
KRT18-204ENST00000548015 PTPRTO14522 1441 aa17.54■□□□□ 0.4
KRT18-204ENST00000548015 NPATQ14207 1427 aa17.53■□□□□ 0.4
KRT18-204ENST00000548015 ATP7AQ04656 1500 aa17.52■□□□□ 0.4
KRT18-204ENST00000548015 DHX29Q7Z478 1369 aaKnown RBP17.51■□□□□ 0.39
KRT18-204ENST00000548015 RTEL1-TNFRSF6BF6WH68 1400 aa17.5■□□□□ 0.39
KRT18-204ENST00000548015 PTPRKQ15262 1439 aa17.5■□□□□ 0.39
KRT18-204ENST00000548015 NCOA1Q15788 1441 aa17.5■□□□□ 0.39
KRT18-204ENST00000548015 PREX1Q8TCU6 1659 aa17.5■□□□□ 0.39
KRT18-204ENST00000548015 SETD1BQ9UPS6 1966 aaKnown RBP17.49■□□□□ 0.39
KRT18-204ENST00000548015 NCKAP5LQ9HCH0 1330 aa17.49■□□□□ 0.39
KRT18-204ENST00000548015 RSPH4AQ5TD94 716 aa17.49■□□□□ 0.39
KRT18-204ENST00000548015 PLXNC1O60486 1568 aa17.49■□□□□ 0.39
KRT18-204ENST00000548015 TIAM1Q13009 1591 aa17.49■□□□□ 0.39
KRT18-204ENST00000548015 EHBP1L1Q8N3D4 1523 aa17.48■□□□□ 0.39
KRT18-204ENST00000548015 NCOA2Q15596 1464 aa17.48■□□□□ 0.39
KRT18-204ENST00000548015 C3P01024 1663 aa17.48■□□□□ 0.39
KRT18-204ENST00000548015 KIF3BO15066 747 aa17.47■□□□□ 0.39
KRT18-204ENST00000548015 STRCQ7RTU9 1775 aa17.47■□□□□ 0.39
KRT18-204ENST00000548015 INO80Q9ULG1 1556 aaPredicted RBP17.46■□□□□ 0.39
KRT18-204ENST00000548015 KANK4Q5T7N3 995 aaPredicted RBP17.46■□□□□ 0.39
KRT18-204ENST00000548015 FBXO31Q5XUX0 539 aaPredicted RBP17.44■□□□□ 0.38
KRT18-204ENST00000548015 VPS8Q8N3P4 1428 aa17.42■□□□□ 0.38
KRT18-204ENST00000548015 TSPY4P0CV99 314 aa17.42■□□□□ 0.38
KRT18-204ENST00000548015 TSPY10P0CW01 314 aa17.42■□□□□ 0.38
KRT18-204ENST00000548015 PKD2Q13563 968 aa17.42■□□□□ 0.38
KRT18-204ENST00000548015 CCDC141Q6ZP82 1450 aa17.41■□□□□ 0.38
KRT18-204ENST00000548015 CAMSAP2Q08AD1 1489 aa17.4■□□□□ 0.38
KRT18-204ENST00000548015 CAMSAP1Q5T5Y3 1602 aa17.39■□□□□ 0.38
KRT18-204ENST00000548015 LTBP4Q8N2S1 1624 aa17.39■□□□□ 0.38
KRT18-204ENST00000548015 LRRC9Q6ZRR7 1453 aa17.39■□□□□ 0.37
KRT18-204ENST00000548015 ZNF335Q9H4Z2 1342 aaPredicted RBP17.39■□□□□ 0.37
KRT18-204ENST00000548015 WASHC2CQ9Y4E1 1318 aa17.39■□□□□ 0.37
KRT18-204ENST00000548015 SUPT6HQ7KZ85 1726 aaKnown RBP17.38■□□□□ 0.37
KRT18-204ENST00000548015 PLA2R1Q13018 1463 aa17.37■□□□□ 0.37
KRT18-204ENST00000548015 TNRQ92752 1358 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms