RNA–Protein interactions for RNA: ENST00000548010.1

LINC01475-201, Transcript of long intergenic non-protein coding RNA 1475, humanhuman

TSL 1 (best) BASIC

Gene LINC01475, Length 766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01475-201ENST00000548010 CDK11AQ9UQ88 783 aaPredicted RBP23.27■■□□□ 1.32
LINC01475-201ENST00000548010 EFCAB2Q5VUJ9 269 aa23.25■■□□□ 1.31
LINC01475-201ENST00000548010 MYO5CQ9NQX4 1742 aa23.25■■□□□ 1.31
LINC01475-201ENST00000548010 ATP10AO60312 1499 aa23.24■■□□□ 1.31
LINC01475-201ENST00000548010 UBTFP17480 764 aaKnown RBP23.23■■□□□ 1.31
LINC01475-201ENST00000548010 TROQ12816 1431 aaPredicted RBP23.23■■□□□ 1.31
LINC01475-201ENST00000548010 ARHGEF12Q9NZN5 1544 aa23.22■■□□□ 1.31
LINC01475-201ENST00000548010 KIF14Q15058 1648 aa23.22■■□□□ 1.31
LINC01475-201ENST00000548010 C9orf84Q5VXU9 1444 aa23.21■■□□□ 1.31
LINC01475-201ENST00000548010 ZNF518AQ6AHZ1 1483 aa23.2■■□□□ 1.3
LINC01475-201ENST00000548010 KDM5CP41229 1560 aa23.19■■□□□ 1.3
LINC01475-201ENST00000548010 FER1L4A9Z1Z3 1794 aa23.18■■□□□ 1.3
LINC01475-201ENST00000548010 CLIP1P30622 1438 aa23.17■■□□□ 1.3
LINC01475-201ENST00000548010 REREQ9P2R6 1566 aa23.15■■□□□ 1.3
LINC01475-201ENST00000548010 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
LINC01475-201ENST00000548010 ARHGAP5Q13017 1502 aa23.13■■□□□ 1.29
LINC01475-201ENST00000548010 ATP1B4Q9UN42 357 aaPredicted RBP23.11■■□□□ 1.29
LINC01475-201ENST00000548010 LRRIQ1Q96JM4 1722 aa23.11■■□□□ 1.29
LINC01475-201ENST00000548010 HSPA2P54652 639 aa23.1■■□□□ 1.29
LINC01475-201ENST00000548010 CCDC18Q5T9S5 1454 aa23.1■■□□□ 1.29
LINC01475-201ENST00000548010 MLH3Q9UHC1 1453 aa23.1■■□□□ 1.29
LINC01475-201ENST00000548010 CASKIN1Q8WXD9 1431 aa23.09■■□□□ 1.29
LINC01475-201ENST00000548010 MLECQ14165 292 aa23.09■■□□□ 1.29
LINC01475-201ENST00000548010 PREX1Q8TCU6 1659 aa23.07■■□□□ 1.28
LINC01475-201ENST00000548010 DIP2CQ9Y2E4 1556 aa23.07■■□□□ 1.28
LINC01475-201ENST00000548010 CDC42BPBQ9Y5S2 1711 aa23.06■■□□□ 1.28
LINC01475-201ENST00000548010 AFAP1Q8N556 730 aa23.06■■□□□ 1.28
LINC01475-201ENST00000548010 PREX2Q70Z35 1606 aa23.06■■□□□ 1.28
LINC01475-201ENST00000548010 AGLP35573 1532 aa23.05■■□□□ 1.28
LINC01475-201ENST00000548010 ABCC1P33527 1531 aa23.04■■□□□ 1.28
LINC01475-201ENST00000548010 EHMT2Q96KQ7 1210 aa23.01■■□□□ 1.27
LINC01475-201ENST00000548010 ABCA6Q8N139 1617 aa23■■□□□ 1.27
LINC01475-201ENST00000548010 FYCO1Q9BQS8 1478 aa22.99■■□□□ 1.27
LINC01475-201ENST00000548010 PLPPR3Q6T4P5 718 aa22.99■■□□□ 1.27
LINC01475-201ENST00000548010 TRAPPC8Q9Y2L5 1435 aa22.99■■□□□ 1.27
LINC01475-201ENST00000548010 SETD1BQ9UPS6 1966 aaKnown RBP22.98■■□□□ 1.27
LINC01475-201ENST00000548010 ITSN2Q9NZM3 1697 aa22.98■■□□□ 1.27
LINC01475-201ENST00000548010 CERKQ8TCT0 537 aa22.97■■□□□ 1.27
LINC01475-201ENST00000548010 UHRF1BP1Q6BDS2 1440 aa22.97■■□□□ 1.27
LINC01475-201ENST00000548010 CEBPAP49715 358 aaPredicted RBP22.95■■□□□ 1.26
LINC01475-201ENST00000548010 DMRT2Q9Y5R5 561 aa22.95■■□□□ 1.26
LINC01475-201ENST00000548010 CDC42BPAQ5VT25 1732 aa22.94■■□□□ 1.26
LINC01475-201ENST00000548010 KIDINS220Q9ULH0 1771 aa22.93■■□□□ 1.26
LINC01475-201ENST00000548010 CNTLNQ9NXG0 1405 aa22.92■■□□□ 1.26
LINC01475-201ENST00000548010 STRCQ7RTU9 1775 aa22.91■■□□□ 1.26
LINC01475-201ENST00000548010 C3P01024 1663 aa22.9■■□□□ 1.26
LINC01475-201ENST00000548010 MYT1LQ9UL68 1186 aa22.89■■□□□ 1.25
LINC01475-201ENST00000548010 SAMD9LQ8IVG5 1584 aa22.89■■□□□ 1.25
LINC01475-201ENST00000548010 GPATCH8Q9UKJ3 1502 aaKnown RBP22.87■■□□□ 1.25
LINC01475-201ENST00000548010 PTPRTO14522 1441 aa22.87■■□□□ 1.25
LINC01475-201ENST00000548010 KIAA1107Q9UPP5 1409 aa22.87■■□□□ 1.25
LINC01475-201ENST00000548010 PLEKHH2Q8IVE3 1493 aa22.84■■□□□ 1.25
LINC01475-201ENST00000548010 MROH2AA6NES4 1674 aa22.84■■□□□ 1.25
LINC01475-201ENST00000548010 NPATQ14207 1427 aa22.83■■□□□ 1.25
LINC01475-201ENST00000548010 ESF1Q9H501 851 aaKnown RBP22.83■■□□□ 1.25
LINC01475-201ENST00000548010 SYCP2Q9BX26 1530 aa22.82■■□□□ 1.24
LINC01475-201ENST00000548010 PLXNC1O60486 1568 aa22.8■■□□□ 1.24
LINC01475-201ENST00000548010 INO80Q9ULG1 1556 aaPredicted RBP22.79■■□□□ 1.24
LINC01475-201ENST00000548010 SPAG9O60271 1321 aaKnown RBP22.79■■□□□ 1.24
LINC01475-201ENST00000548010 ATP7AQ04656 1500 aa22.78■■□□□ 1.24
LINC01475-201ENST00000548010 NCOA1Q15788 1441 aa22.77■■□□□ 1.24
LINC01475-201ENST00000548010 IQSEC2Q5JU85 1478 aa22.75■■□□□ 1.23
LINC01475-201ENST00000548010 CCNB3Q8WWL7 1395 aa22.75■■□□□ 1.23
LINC01475-201ENST00000548010 CFDP1Q9UEE9 299 aaPredicted RBP22.74■■□□□ 1.23
LINC01475-201ENST00000548010 ZNF777Q9ULD5 760 aaPredicted RBP22.74■■□□□ 1.23
LINC01475-201ENST00000548010 ZMYM3Q14202 1370 aa22.74■■□□□ 1.23
LINC01475-201ENST00000548010 HNRNPMP52272 730 aaKnown RBP eCLIP22.73■■□□□ 1.23
LINC01475-201ENST00000548010 A2MP01023 1474 aa22.73■■□□□ 1.23
LINC01475-201ENST00000548010 LTBP4Q8N2S1 1624 aa22.72■■□□□ 1.23
LINC01475-201ENST00000548010 PPP6R1Q9UPN7 881 aa22.72■■□□□ 1.23
LINC01475-201ENST00000548010 MTUS2Q5JR59 1369 aa22.71■■□□□ 1.23
LINC01475-201ENST00000548010 SUPT6HQ7KZ85 1726 aaKnown RBP22.69■■□□□ 1.22
LINC01475-201ENST00000548010 ZNF142P52746 1687 aaPredicted RBP22.68■■□□□ 1.22
LINC01475-201ENST00000548010 EHBP1L1Q8N3D4 1523 aa22.67■■□□□ 1.22
LINC01475-201ENST00000548010 PLA2R1Q13018 1463 aa22.67■■□□□ 1.22
LINC01475-201ENST00000548010 MBD5Q9P267 1494 aa22.67■■□□□ 1.22
LINC01475-201ENST00000548010 RTEL1-TNFRSF6BF6WH68 1400 aa22.67■■□□□ 1.22
LINC01475-201ENST00000548010 ADGBQ8N7X0 1667 aa22.67■■□□□ 1.22
LINC01475-201ENST00000548010 CAMSAP1Q5T5Y3 1602 aa22.67■■□□□ 1.22
LINC01475-201ENST00000548010 TIAM1Q13009 1591 aa22.67■■□□□ 1.22
LINC01475-201ENST00000548010 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
LINC01475-201ENST00000548010 PTPRKQ15262 1439 aa22.65■■□□□ 1.22
LINC01475-201ENST00000548010 CLTCQ00610 1675 aaKnown RBP22.65■■□□□ 1.22
LINC01475-201ENST00000548010 MYO3AQ8NEV4 1616 aa22.63■■□□□ 1.21
LINC01475-201ENST00000548010 TCOF1Q13428 1488 aaKnown RBP22.61■■□□□ 1.21
LINC01475-201ENST00000548010 CEP170BQ9Y4F5 1589 aaPredicted RBP22.61■■□□□ 1.21
LINC01475-201ENST00000548010 FAM135AQ9P2D6 1515 aa22.61■■□□□ 1.21
LINC01475-201ENST00000548010 PKD2Q13563 968 aa22.6■■□□□ 1.21
LINC01475-201ENST00000548010 DHX29Q7Z478 1369 aaKnown RBP22.58■■□□□ 1.21
LINC01475-201ENST00000548010 ZNF644Q9H582 1327 aaPredicted RBP22.57■■□□□ 1.2
LINC01475-201ENST00000548010 GGT6Q6P531 493 aa22.56■■□□□ 1.2
LINC01475-201ENST00000548010 RSPH4AQ5TD94 716 aa22.55■■□□□ 1.2
LINC01475-201ENST00000548010 A2ML1A8K2U0 1454 aa22.54■■□□□ 1.2
LINC01475-201ENST00000548010 CCDC141Q6ZP82 1450 aa22.54■■□□□ 1.2
LINC01475-201ENST00000548010 NCKAP5LQ9HCH0 1330 aa22.53■■□□□ 1.2
LINC01475-201ENST00000548010 NCOA2Q15596 1464 aa22.51■■□□□ 1.19
LINC01475-201ENST00000548010 DISP3Q9P2K9 1392 aa22.5■■□□□ 1.19
LINC01475-201ENST00000548010 DNMT1P26358 1616 aaKnown RBP22.49■■□□□ 1.19
LINC01475-201ENST00000548010 PZPP20742 1482 aa22.48■■□□□ 1.19
LINC01475-201ENST00000548010 CAMSAP2Q08AD1 1489 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms