RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 EHBP1L1Q8N3D4 1523 aa29.64■■■□□ 2.34
PRPF40B-206ENST00000547764 PREX2Q70Z35 1606 aa29.63■■■□□ 2.33
PRPF40B-206ENST00000547764 TIAM1Q13009 1591 aa29.63■■■□□ 2.33
PRPF40B-206ENST00000547764 CDC42BPAQ5VT25 1732 aa29.61■■■□□ 2.33
PRPF40B-206ENST00000547764 RICTORQ6R327 1708 aa29.61■■■□□ 2.33
PRPF40B-206ENST00000547764 GPATCH8Q9UKJ3 1502 aaKnown RBP29.6■■■□□ 2.33
PRPF40B-206ENST00000547764 CCNB3Q8WWL7 1395 aa29.57■■■□□ 2.32
PRPF40B-206ENST00000547764 POGZQ7Z3K3 1410 aa29.56■■■□□ 2.32
PRPF40B-206ENST00000547764 MAP3K1Q13233 1512 aa29.55■■■□□ 2.32
PRPF40B-206ENST00000547764 LRRC9Q6ZRR7 1453 aa29.53■■■□□ 2.32
PRPF40B-206ENST00000547764 KDM4FA0A1W2PPD8 638 aa29.52■■■□□ 2.32
PRPF40B-206ENST00000547764 ZMYM4Q5VZL5 1548 aa29.51■■■□□ 2.32
PRPF40B-206ENST00000547764 CFDP1Q9UEE9 299 aaPredicted RBP29.51■■■□□ 2.31
PRPF40B-206ENST00000547764 ZNF777Q9ULD5 760 aaPredicted RBP29.51■■■□□ 2.31
PRPF40B-206ENST00000547764 KANK4Q5T7N3 995 aaPredicted RBP29.5■■■□□ 2.31
PRPF40B-206ENST00000547764 NCOA2Q15596 1464 aa29.48■■■□□ 2.31
PRPF40B-206ENST00000547764 SUPT6HQ7KZ85 1726 aaKnown RBP29.48■■■□□ 2.31
PRPF40B-206ENST00000547764 AEBP2Q6ZN18 517 aaPredicted RBP29.48■■■□□ 2.31
PRPF40B-206ENST00000547764 AFAP1Q8N556 730 aa29.48■■■□□ 2.31
PRPF40B-206ENST00000547764 ABCC1P33527 1531 aa29.48■■■□□ 2.31
PRPF40B-206ENST00000547764 ARHGEF12Q9NZN5 1544 aa29.47■■■□□ 2.31
PRPF40B-206ENST00000547764 APLP2Q06481 763 aa29.47■■■□□ 2.31
PRPF40B-206ENST00000547764 ZNF518AQ6AHZ1 1483 aa29.47■■■□□ 2.31
PRPF40B-206ENST00000547764 SAMD9LQ8IVG5 1584 aa29.45■■■□□ 2.31
PRPF40B-206ENST00000547764 MAGI2Q86UL8 1455 aa29.45■■■□□ 2.31
PRPF40B-206ENST00000547764 ARHGEF40Q8TER5 1519 aa29.44■■■□□ 2.3
PRPF40B-206ENST00000547764 YEATS2Q9ULM3 1422 aa29.44■■■□□ 2.3
PRPF40B-206ENST00000547764 ZFYVE16Q7Z3T8 1539 aa29.43■■■□□ 2.3
PRPF40B-206ENST00000547764 TRAPPC8Q9Y2L5 1435 aa29.43■■■□□ 2.3
PRPF40B-206ENST00000547764 ITSN2Q9NZM3 1697 aa29.41■■■□□ 2.3
PRPF40B-206ENST00000547764 KDM5CP41229 1560 aa29.41■■■□□ 2.3
PRPF40B-206ENST00000547764 HNRNPMP52272 730 aaKnown RBP eCLIP29.39■■■□□ 2.3
PRPF40B-206ENST00000547764 SYCP2Q9BX26 1530 aa29.38■■■□□ 2.29
PRPF40B-206ENST00000547764 ZNF644Q9H582 1327 aaPredicted RBP29.38■■■□□ 2.29
PRPF40B-206ENST00000547764 KIAA1107Q9UPP5 1409 aa29.37■■■□□ 2.29
PRPF40B-206ENST00000547764 PLEKHH2Q8IVE3 1493 aa29.37■■■□□ 2.29
PRPF40B-206ENST00000547764 MYT1LQ9UL68 1186 aa29.35■■■□□ 2.29
PRPF40B-206ENST00000547764 ARID4BQ4LE39 1312 aaPredicted RBP29.34■■■□□ 2.29
PRPF40B-206ENST00000547764 MLH3Q9UHC1 1453 aa29.33■■■□□ 2.29
PRPF40B-206ENST00000547764 HECW2Q9P2P5 1572 aa29.32■■■□□ 2.28
PRPF40B-206ENST00000547764 ATP10AO60312 1499 aa29.31■■■□□ 2.28
PRPF40B-206ENST00000547764 MBD5Q9P267 1494 aa29.26■■■□□ 2.27
PRPF40B-206ENST00000547764 C9orf84Q5VXU9 1444 aa29.26■■■□□ 2.27
PRPF40B-206ENST00000547764 SIGLEC1Q9BZZ2 1709 aa29.25■■■□□ 2.27
PRPF40B-206ENST00000547764 SPAG9O60271 1321 aaKnown RBP29.25■■■□□ 2.27
PRPF40B-206ENST00000547764 CAMSAP2Q08AD1 1489 aa29.25■■■□□ 2.27
PRPF40B-206ENST00000547764 MYOM3Q5VTT5 1437 aa29.24■■■□□ 2.27
PRPF40B-206ENST00000547764 DIP2CQ9Y2E4 1556 aa29.24■■■□□ 2.27
PRPF40B-206ENST00000547764 KIDINS220Q9ULH0 1771 aa29.24■■■□□ 2.27
PRPF40B-206ENST00000547764 ABCA6Q8N139 1617 aa29.23■■■□□ 2.27
PRPF40B-206ENST00000547764 BCORL1Q5H9F3 1711 aa29.22■■■□□ 2.27
PRPF40B-206ENST00000547764 ADAMTSL3P82987 1691 aa29.2■■■□□ 2.26
PRPF40B-206ENST00000547764 MIA2Q96PC5 1412 aa29.2■■■□□ 2.26
PRPF40B-206ENST00000547764 ATP7AQ04656 1500 aa29.16■■■□□ 2.26
PRPF40B-206ENST00000547764 RSPH4AQ5TD94 716 aa29.16■■■□□ 2.26
PRPF40B-206ENST00000547764 REREQ9P2R6 1566 aa29.15■■■□□ 2.26
PRPF40B-206ENST00000547764 INO80Q9ULG1 1556 aaPredicted RBP29.15■■■□□ 2.26
PRPF40B-206ENST00000547764 MLECQ14165 292 aa29.15■■■□□ 2.26
PRPF40B-206ENST00000547764 CCDC141Q6ZP82 1450 aa29.14■■■□□ 2.26
PRPF40B-206ENST00000547764 ARHGEF5Q12774 1597 aa29.11■■■□□ 2.25
PRPF40B-206ENST00000547764 MADDQ8WXG6 1647 aa29.11■■■□□ 2.25
PRPF40B-206ENST00000547764 RTEL1-TNFRSF6BF6WH68 1400 aa29.1■■■□□ 2.25
PRPF40B-206ENST00000547764 AGLP35573 1532 aa29.08■■■□□ 2.25
PRPF40B-206ENST00000547764 PTPRMP28827 1452 aa29.07■■■□□ 2.24
PRPF40B-206ENST00000547764 FGD6Q6ZV73 1430 aa29.07■■■□□ 2.24
PRPF40B-206ENST00000547764 TSPY4P0CV99 314 aa29.05■■■□□ 2.24
PRPF40B-206ENST00000547764 TSPY10P0CW01 314 aa29.05■■■□□ 2.24
PRPF40B-206ENST00000547764 PTPN23Q9H3S7 1636 aa29.05■■■□□ 2.24
PRPF40B-206ENST00000547764 A2MP01023 1474 aa29.04■■■□□ 2.24
PRPF40B-206ENST00000547764 RIMS1Q86UR5 1692 aaKnown RBP29.02■■■□□ 2.24
PRPF40B-206ENST00000547764 PPARGC1BQ86YN6 1023 aaKnown RBP29.01■■■□□ 2.23
PRPF40B-206ENST00000547764 TCOF1Q13428 1488 aaKnown RBP29■■■□□ 2.23
PRPF40B-206ENST00000547764 ADGBQ8N7X0 1667 aa28.99■■■□□ 2.23
PRPF40B-206ENST00000547764 PLXNC1O60486 1568 aa28.99■■■□□ 2.23
PRPF40B-206ENST00000547764 FER1L4A9Z1Z3 1794 aa28.98■■■□□ 2.23
PRPF40B-206ENST00000547764 DHX29Q7Z478 1369 aaKnown RBP28.95■■■□□ 2.22
PRPF40B-206ENST00000547764 MAST1Q9Y2H9 1570 aa28.95■■■□□ 2.22
PRPF40B-206ENST00000547764 ABCC5O15440 1437 aa28.94■■■□□ 2.22
PRPF40B-206ENST00000547764 PLPPR3Q6T4P5 718 aa28.92■■■□□ 2.22
PRPF40B-206ENST00000547764 DAPK1P53355 1430 aa28.9■■■□□ 2.22
PRPF40B-206ENST00000547764 FAM50AQ14320 339 aaKnown RBP28.9■■■□□ 2.22
PRPF40B-206ENST00000547764 DNMT1P26358 1616 aaKnown RBP28.88■■■□□ 2.21
PRPF40B-206ENST00000547764 ESF1Q9H501 851 aaKnown RBP28.88■■■□□ 2.21
PRPF40B-206ENST00000547764 SHANK2Q9UPX8 1470 aa28.87■■■□□ 2.21
PRPF40B-206ENST00000547764 GGT6Q6P531 493 aa28.87■■■□□ 2.21
PRPF40B-206ENST00000547764 CROCC2H7BZ55 1655 aa28.86■■■□□ 2.21
PRPF40B-206ENST00000547764 CEBPAP49715 358 aaPredicted RBP28.85■■■□□ 2.21
PRPF40B-206ENST00000547764 KIF3BO15066 747 aa28.84■■■□□ 2.21
PRPF40B-206ENST00000547764 CNTLNQ9NXG0 1405 aa28.82■■■□□ 2.2
PRPF40B-206ENST00000547764 CHIC2Q9UKJ5 165 aa28.81■■■□□ 2.2
PRPF40B-206ENST00000547764 PPP6R1Q9UPN7 881 aa28.79■■■□□ 2.2
PRPF40B-206ENST00000547764 RRP7BPQ9NSQ0 103 aa28.78■■■□□ 2.2
PRPF40B-206ENST00000547764 KIF15Q9NS87 1388 aa28.77■■■□□ 2.2
PRPF40B-206ENST00000547764 DUOX2Q9NRD8 1548 aa28.75■■■□□ 2.19
PRPF40B-206ENST00000547764 ANKRD30AQ9BXX3 1397 aa28.75■■■□□ 2.19
PRPF40B-206ENST00000547764 C3P01024 1663 aa28.74■■■□□ 2.19
PRPF40B-206ENST00000547764 ZMYM3Q14202 1370 aa28.74■■■□□ 2.19
PRPF40B-206ENST00000547764 CLTCQ00610 1675 aaKnown RBP28.73■■■□□ 2.19
PRPF40B-206ENST00000547764 MROH2AA6NES4 1674 aa28.71■■■□□ 2.19
PRPF40B-206ENST00000547764 NCOA1Q15788 1441 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms