RNA–Protein interactions for RNA: ENST00000547314.5

TGFBR1-204, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-204ENST00000547314 C2orf72A6NCS6 295 aa11.36□□□□□ -0.59
TGFBR1-204ENST00000547314 G3V3G9 751 aa11.36□□□□□ -0.59
TGFBR1-204ENST00000547314 KIF3CO14782 793 aa11.35□□□□□ -0.59
TGFBR1-204ENST00000547314 CRISPLD2Q9H0B8 497 aa11.34□□□□□ -0.59
TGFBR1-204ENST00000547314 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.34□□□□□ -0.59
TGFBR1-204ENST00000547314 SLAIN1Q8ND83 568 aa11.33□□□□□ -0.6
TGFBR1-204ENST00000547314 SCUBE2Q9NQ36 999 aa11.32□□□□□ -0.6
TGFBR1-204ENST00000547314 DSG2Q14126 1118 aa11.3□□□□□ -0.6
TGFBR1-204ENST00000547314 LARP6Q9BRS8 491 aaKnown RBP11.3□□□□□ -0.6
TGFBR1-204ENST00000547314 GPHNQ9NQX3 736 aaPredicted RBP11.29□□□□□ -0.6
TGFBR1-204ENST00000547314 MAMSTRQ6ZN01 415 aa11.27□□□□□ -0.61
TGFBR1-204ENST00000547314 TMC2Q8TDI7 906 aa11.25□□□□□ -0.61
TGFBR1-204ENST00000547314 MFSD10Q14728 455 aa11.23□□□□□ -0.61
TGFBR1-204ENST00000547314 PDE4AP27815 886 aa11.22□□□□□ -0.61
TGFBR1-204ENST00000547314 FOXK1P85037 733 aa11.22□□□□□ -0.61
TGFBR1-204ENST00000547314 HOXB3P14651 431 aaPredicted RBP11.21□□□□□ -0.61
TGFBR1-204ENST00000547314 PPP1R15BQ5SWA1 713 aa11.21□□□□□ -0.61
TGFBR1-204ENST00000547314 PLPP6Q8IY26 295 aa11.21□□□□□ -0.61
TGFBR1-204ENST00000547314 DDX27Q96GQ7 796 aaKnown RBP11.2□□□□□ -0.62
TGFBR1-204ENST00000547314 SLC24A1O60721 1099 aa11.19□□□□□ -0.62
TGFBR1-204ENST00000547314 EMILIN3Q9NT22 766 aa11.17□□□□□ -0.62
TGFBR1-204ENST00000547314 LCE2DQ5TA82 110 aaPredicted RBP11.15□□□□□ -0.62
TGFBR1-204ENST00000547314 KHSRPQ92945 711 aaKnown RBP eCLIP11.15□□□□□ -0.621e-6■■□□□ 12
TGFBR1-204ENST00000547314 VSIG10Q8N0Z9 540 aa11.14□□□□□ -0.63
TGFBR1-204ENST00000547314 KCNV2Q8TDN2 545 aa11.12□□□□□ -0.63
TGFBR1-204ENST00000547314 UPF1Q92900 1129 aaKnown RBP eCLIP11.12□□□□□ -0.63
TGFBR1-204ENST00000547314 CAMK2BQ13554 666 aa11.11□□□□□ -0.63
TGFBR1-204ENST00000547314 WDR70Q9NW82 654 aa11.08□□□□□ -0.64
TGFBR1-204ENST00000547314 E2F4Q16254 413 aa11.07□□□□□ -0.64
TGFBR1-204ENST00000547314 ARSIQ5FYB1 569 aa11.07□□□□□ -0.64
TGFBR1-204ENST00000547314 FAM163AQ96GL9 167 aaPredicted RBP11.07□□□□□ -0.64
TGFBR1-204ENST00000547314 ST18O60284 1047 aa11.06□□□□□ -0.64
TGFBR1-204ENST00000547314 GPR153Q6NV75 609 aa11.06□□□□□ -0.64
TGFBR1-204ENST00000547314 OXER1Q8TDS5 423 aa11.06□□□□□ -0.64
TGFBR1-204ENST00000547314 DPYSL4O14531 572 aa11.05□□□□□ -0.64
TGFBR1-204ENST00000547314 PCDHGA4Q9Y5G9 962 aa11.05□□□□□ -0.64
TGFBR1-204ENST00000547314 SLC34A2O95436 690 aa11.04□□□□□ -0.64
TGFBR1-204ENST00000547314 PTCD2Q8WV60 388 aaKnown RBP11.03□□□□□ -0.64
TGFBR1-204ENST00000547314 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
TGFBR1-204ENST00000547314 MARVELD3Q96A59 401 aa11.02□□□□□ -0.65
TGFBR1-204ENST00000547314 KDM4FA0A1W2PPD8 638 aa11.01□□□□□ -0.65
TGFBR1-204ENST00000547314 NUDT7P0C024 238 aa11□□□□□ -0.65
TGFBR1-204ENST00000547314 ZNF710Q8N1W2 664 aa10.98□□□□□ -0.65
TGFBR1-204ENST00000547314 SNPHO15079 494 aa10.97□□□□□ -0.65
TGFBR1-204ENST00000547314 POTEB3A0JP26 581 aa10.96□□□□□ -0.65
TGFBR1-204ENST00000547314 HOXB1P14653 301 aaPredicted RBP10.96□□□□□ -0.65
TGFBR1-204ENST00000547314 POTEBQ6S5H4 581 aa10.96□□□□□ -0.65
TGFBR1-204ENST00000547314 MAP3K9P80192 1104 aa10.95□□□□□ -0.66
TGFBR1-204ENST00000547314 EVI5O60447 810 aa10.94□□□□□ -0.66
TGFBR1-204ENST00000547314 ARIH1Q9Y4X5 557 aaPredicted RBP10.92□□□□□ -0.66
TGFBR1-204ENST00000547314 SEMA3EO15041 775 aa10.91□□□□□ -0.66
TGFBR1-204ENST00000547314 ARHGEF1Q92888 912 aaKnown RBP10.91□□□□□ -0.66
TGFBR1-204ENST00000547314 ZSWIM6Q9HCJ5 1215 aa10.91□□□□□ -0.66
TGFBR1-204ENST00000547314 LHX6Q9UPM6 363 aa10.91□□□□□ -0.66
TGFBR1-204ENST00000547314 RIMBP2O15034 1052 aa10.9□□□□□ -0.66
TGFBR1-204ENST00000547314 MLLT3P42568 568 aaPredicted RBP10.9□□□□□ -0.66
TGFBR1-204ENST00000547314 PDIA6Q15084 440 aa10.9□□□□□ -0.66
TGFBR1-204ENST00000547314 PRIM1P49642 420 aaKnown RBP10.88□□□□□ -0.67
TGFBR1-204ENST00000547314 ANO8Q9HCE9 1232 aaPredicted RBP10.88□□□□□ -0.67
TGFBR1-204ENST00000547314 P3H3Q8IVL6 736 aa10.87□□□□□ -0.67
TGFBR1-204ENST00000547314 DDX12PQ92771 950 aa10.87□□□□□ -0.67
TGFBR1-204ENST00000547314 FAM205CA6NFA0 338 aa10.86□□□□□ -0.67
TGFBR1-204ENST00000547314 TBC1D12O60347 775 aa10.86□□□□□ -0.67
TGFBR1-204ENST00000547314 EMP3P54852 163 aa10.86□□□□□ -0.67
TGFBR1-204ENST00000547314 ZNF316A6NFI3 1004 aaPredicted RBP10.84□□□□□ -0.67
TGFBR1-204ENST00000547314 VARS2Q5ST30 1063 aaKnown RBP10.83□□□□□ -0.68
TGFBR1-204ENST00000547314 HS3ST6Q96QI5 342 aa10.82□□□□□ -0.68
TGFBR1-204ENST00000547314 PCDHGA10Q9Y5H3 936 aa10.82□□□□□ -0.68
TGFBR1-204ENST00000547314 GRXCR2A6NFK2 248 aa10.81□□□□□ -0.68
TGFBR1-204ENST00000547314 POTEEQ6S8J3 1075 aa10.81□□□□□ -0.68
TGFBR1-204ENST00000547314 ERBB3P21860 1342 aa10.81□□□□□ -0.68
TGFBR1-204ENST00000547314 POTEMA6NI47 508 aa10.8□□□□□ -0.68
TGFBR1-204ENST00000547314 POTEGQ6S5H5 508 aa10.8□□□□□ -0.68
TGFBR1-204ENST00000547314 SPDYE16A6NNV3 312 aaPredicted RBP10.79□□□□□ -0.68
TGFBR1-204ENST00000547314 FOSBP53539 338 aa10.79□□□□□ -0.68
TGFBR1-204ENST00000547314 ZNF454Q8N9F8 522 aa10.79□□□□□ -0.68
TGFBR1-204ENST00000547314 TESPA1A2RU30 521 aaPredicted RBP10.78□□□□□ -0.68
TGFBR1-204ENST00000547314 PTGER2P43116 358 aa10.78□□□□□ -0.68
TGFBR1-204ENST00000547314 OSBPP22059 807 aa10.77□□□□□ -0.69
TGFBR1-204ENST00000547314 ADAM33Q9BZ11 813 aa10.76□□□□□ -0.69
TGFBR1-204ENST00000547314 NBR1Q14596 966 aa10.75□□□□□ -0.69
TGFBR1-204ENST00000547314 RBM33Q96EV2 1170 aaKnown RBP10.75□□□□□ -0.69
TGFBR1-204ENST00000547314 JPH4Q96JJ6 628 aa10.75□□□□□ -0.69
TGFBR1-204ENST00000547314 AXIN2Q9Y2T1 843 aa10.75□□□□□ -0.69
TGFBR1-204ENST00000547314 TSR1Q2NL82 804 aaKnown RBP10.73□□□□□ -0.69
TGFBR1-204ENST00000547314 RBM26Q5T8P6 1007 aaKnown RBP10.73□□□□□ -0.69
TGFBR1-204ENST00000547314 PHF14O94880 888 aa10.72□□□□□ -0.69
TGFBR1-204ENST00000547314 CDHR5Q9HBB8 845 aa10.72□□□□□ -0.69
TGFBR1-204ENST00000547314 PSEN2P49810 448 aa10.71□□□□□ -0.69
TGFBR1-204ENST00000547314 ZDHHC16Q969W1 377 aa10.69□□□□□ -0.7
TGFBR1-204ENST00000547314 COL9A1P20849 921 aa10.68□□□□□ -0.7
TGFBR1-204ENST00000547314 PPP4R3BQ5MIZ7 849 aa10.68□□□□□ -0.7
TGFBR1-204ENST00000547314 TYW1BQ6NUM6 668 aa10.68□□□□□ -0.7
TGFBR1-204ENST00000547314 ZNF687Q8N1G0 1237 aa10.68□□□□□ -0.7
TGFBR1-204ENST00000547314 KRTAP3-3Q9BYR6 98 aa10.68□□□□□ -0.7
TGFBR1-204ENST00000547314 KRTAP3-2Q9BYR7 98 aa10.68□□□□□ -0.7
TGFBR1-204ENST00000547314 EN1Q05925 392 aaPredicted RBP10.67□□□□□ -0.7
TGFBR1-204ENST00000547314 DMRTA1Q5VZB9 504 aa10.67□□□□□ -0.7
TGFBR1-204ENST00000547314 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.65□□□□□ -0.74e-6■□□□□ 9.1
TGFBR1-204ENST00000547314 CDAN1Q8IWY9 1227 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms