RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 SCAPERQ9BY12 1400 aa18.9■□□□□ 0.62
RAB5C-203ENST00000546881 MLECQ14165 292 aa18.88■□□□□ 0.61
RAB5C-203ENST00000546881 MYO5CQ9NQX4 1742 aa18.87■□□□□ 0.61
RAB5C-203ENST00000546881 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
RAB5C-203ENST00000546881 MAGI2Q86UL8 1455 aa18.86■□□□□ 0.61
RAB5C-203ENST00000546881 EFCAB2Q5VUJ9 269 aa18.86■□□□□ 0.61
RAB5C-203ENST00000546881 SIGLEC1Q9BZZ2 1709 aa18.86■□□□□ 0.61
RAB5C-203ENST00000546881 KIF14Q15058 1648 aa18.85■□□□□ 0.61
RAB5C-203ENST00000546881 LMTK3Q96Q04 1460 aa18.84■□□□□ 0.61
RAB5C-203ENST00000546881 CLIP1P30622 1438 aa18.83■□□□□ 0.6
RAB5C-203ENST00000546881 TROQ12816 1431 aaPredicted RBP18.82■□□□□ 0.6
RAB5C-203ENST00000546881 ARHGAP5Q13017 1502 aa18.81■□□□□ 0.6
RAB5C-203ENST00000546881 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
RAB5C-203ENST00000546881 LRRIQ1Q96JM4 1722 aa18.8■□□□□ 0.6
RAB5C-203ENST00000546881 FER1L4A9Z1Z3 1794 aa18.79■□□□□ 0.6
RAB5C-203ENST00000546881 HSPA2P54652 639 aa18.79■□□□□ 0.6
RAB5C-203ENST00000546881 ATP10AO60312 1499 aa18.78■□□□□ 0.6
RAB5C-203ENST00000546881 C9orf84Q5VXU9 1444 aa18.77■□□□□ 0.6
RAB5C-203ENST00000546881 FBXO41Q8TF61 875 aa18.77■□□□□ 0.6
RAB5C-203ENST00000546881 ZNF518AQ6AHZ1 1483 aa18.76■□□□□ 0.59
RAB5C-203ENST00000546881 AFAP1Q8N556 730 aa18.75■□□□□ 0.59
RAB5C-203ENST00000546881 CCDC18Q5T9S5 1454 aa18.72■□□□□ 0.59
RAB5C-203ENST00000546881 ARHGEF12Q9NZN5 1544 aa18.72■□□□□ 0.59
RAB5C-203ENST00000546881 CASKIN1Q8WXD9 1431 aa18.72■□□□□ 0.59
RAB5C-203ENST00000546881 CDC42BPBQ9Y5S2 1711 aa18.71■□□□□ 0.59
RAB5C-203ENST00000546881 KDM5CP41229 1560 aa18.7■□□□□ 0.58
RAB5C-203ENST00000546881 CEBPAP49715 358 aaPredicted RBP18.69■□□□□ 0.58
RAB5C-203ENST00000546881 PREX2Q70Z35 1606 aa18.69■□□□□ 0.58
RAB5C-203ENST00000546881 DIP2CQ9Y2E4 1556 aa18.68■□□□□ 0.58
RAB5C-203ENST00000546881 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
RAB5C-203ENST00000546881 ABCC1P33527 1531 aa18.65■□□□□ 0.58
RAB5C-203ENST00000546881 ABCA6Q8N139 1617 aa18.65■□□□□ 0.58
RAB5C-203ENST00000546881 FYCO1Q9BQS8 1478 aa18.65■□□□□ 0.58
RAB5C-203ENST00000546881 PREX1Q8TCU6 1659 aa18.64■□□□□ 0.57
RAB5C-203ENST00000546881 ITSN2Q9NZM3 1697 aa18.64■□□□□ 0.57
RAB5C-203ENST00000546881 ZNF777Q9ULD5 760 aaPredicted RBP18.64■□□□□ 0.57
RAB5C-203ENST00000546881 MLH3Q9UHC1 1453 aa18.63■□□□□ 0.57
RAB5C-203ENST00000546881 ESF1Q9H501 851 aaKnown RBP18.62■□□□□ 0.57
RAB5C-203ENST00000546881 CDC42BPAQ5VT25 1732 aa18.62■□□□□ 0.57
RAB5C-203ENST00000546881 REREQ9P2R6 1566 aa18.6■□□□□ 0.57
RAB5C-203ENST00000546881 UHRF1BP1Q6BDS2 1440 aa18.58■□□□□ 0.57
RAB5C-203ENST00000546881 KIDINS220Q9ULH0 1771 aa18.56■□□□□ 0.56
RAB5C-203ENST00000546881 CERKQ8TCT0 537 aa18.56■□□□□ 0.56
RAB5C-203ENST00000546881 SAMD9LQ8IVG5 1584 aa18.55■□□□□ 0.56
RAB5C-203ENST00000546881 AGLP35573 1532 aa18.55■□□□□ 0.56
RAB5C-203ENST00000546881 SYCP2Q9BX26 1530 aa18.55■□□□□ 0.56
RAB5C-203ENST00000546881 C3P01024 1663 aa18.55■□□□□ 0.56
RAB5C-203ENST00000546881 GPATCH8Q9UKJ3 1502 aaKnown RBP18.54■□□□□ 0.56
RAB5C-203ENST00000546881 HNRNPMP52272 730 aaKnown RBP eCLIP18.54■□□□□ 0.56
RAB5C-203ENST00000546881 SPAG9O60271 1321 aaKnown RBP18.53■□□□□ 0.56
RAB5C-203ENST00000546881 CFDP1Q9UEE9 299 aaPredicted RBP18.52■□□□□ 0.56
RAB5C-203ENST00000546881 MTUS2Q5JR59 1369 aa18.52■□□□□ 0.55
RAB5C-203ENST00000546881 CCNB3Q8WWL7 1395 aa18.52■□□□□ 0.55
RAB5C-203ENST00000546881 DMRT2Q9Y5R5 561 aa18.51■□□□□ 0.55
RAB5C-203ENST00000546881 STRCQ7RTU9 1775 aa18.5■□□□□ 0.55
RAB5C-203ENST00000546881 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
RAB5C-203ENST00000546881 CNTLNQ9NXG0 1405 aa18.49■□□□□ 0.55
RAB5C-203ENST00000546881 SETD1BQ9UPS6 1966 aaKnown RBP18.48■□□□□ 0.55
RAB5C-203ENST00000546881 PLEKHH2Q8IVE3 1493 aa18.47■□□□□ 0.55
RAB5C-203ENST00000546881 ATP7AQ04656 1500 aa18.47■□□□□ 0.55
RAB5C-203ENST00000546881 KIAA1107Q9UPP5 1409 aa18.45■□□□□ 0.54
RAB5C-203ENST00000546881 INO80Q9ULG1 1556 aaPredicted RBP18.43■□□□□ 0.54
RAB5C-203ENST00000546881 A2MP01023 1474 aa18.43■□□□□ 0.54
RAB5C-203ENST00000546881 ZNF644Q9H582 1327 aaPredicted RBP18.42■□□□□ 0.54
RAB5C-203ENST00000546881 ZMYM3Q14202 1370 aa18.42■□□□□ 0.54
RAB5C-203ENST00000546881 MROH2AA6NES4 1674 aa18.41■□□□□ 0.54
RAB5C-203ENST00000546881 CLTCQ00610 1675 aaKnown RBP18.41■□□□□ 0.54
RAB5C-203ENST00000546881 EHBP1L1Q8N3D4 1523 aa18.41■□□□□ 0.54
RAB5C-203ENST00000546881 GGT6Q6P531 493 aa18.41■□□□□ 0.54
RAB5C-203ENST00000546881 TIAM1Q13009 1591 aa18.41■□□□□ 0.54
RAB5C-203ENST00000546881 PTPRTO14522 1441 aa18.4■□□□□ 0.54
RAB5C-203ENST00000546881 CEP162Q5TB80 1403 aa18.4■□□□□ 0.54
RAB5C-203ENST00000546881 PLXNC1O60486 1568 aa18.39■□□□□ 0.53
RAB5C-203ENST00000546881 NPATQ14207 1427 aa18.39■□□□□ 0.53
RAB5C-203ENST00000546881 NCOA1Q15788 1441 aa18.37■□□□□ 0.53
RAB5C-203ENST00000546881 CAMSAP1Q5T5Y3 1602 aa18.37■□□□□ 0.53
RAB5C-203ENST00000546881 ADGBQ8N7X0 1667 aa18.36■□□□□ 0.53
RAB5C-203ENST00000546881 MBD5Q9P267 1494 aa18.33■□□□□ 0.53
RAB5C-203ENST00000546881 NCKAP5LQ9HCH0 1330 aa18.33■□□□□ 0.53
RAB5C-203ENST00000546881 MYO3AQ8NEV4 1616 aa18.33■□□□□ 0.52
RAB5C-203ENST00000546881 PTPRKQ15262 1439 aa18.32■□□□□ 0.52
RAB5C-203ENST00000546881 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
RAB5C-203ENST00000546881 RTEL1-TNFRSF6BF6WH68 1400 aa18.3■□□□□ 0.52
RAB5C-203ENST00000546881 LTBP4Q8N2S1 1624 aa18.3■□□□□ 0.52
RAB5C-203ENST00000546881 CAMSAP2Q08AD1 1489 aa18.29■□□□□ 0.52
RAB5C-203ENST00000546881 CEP170BQ9Y4F5 1589 aaPredicted RBP18.29■□□□□ 0.52
RAB5C-203ENST00000546881 ZNF142P52746 1687 aaPredicted RBP18.28■□□□□ 0.52
RAB5C-203ENST00000546881 CCDC141Q6ZP82 1450 aa18.28■□□□□ 0.52
RAB5C-203ENST00000546881 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
RAB5C-203ENST00000546881 DHX29Q7Z478 1369 aaKnown RBP18.28■□□□□ 0.52
RAB5C-203ENST00000546881 KIF3BO15066 747 aa18.27■□□□□ 0.52
RAB5C-203ENST00000546881 ZNF335Q9H4Z2 1342 aaPredicted RBP18.24■□□□□ 0.51
RAB5C-203ENST00000546881 PKD2Q13563 968 aa18.24■□□□□ 0.51
RAB5C-203ENST00000546881 DISP3Q9P2K9 1392 aa18.24■□□□□ 0.51
RAB5C-203ENST00000546881 PLA2R1Q13018 1463 aa18.24■□□□□ 0.51
RAB5C-203ENST00000546881 LOC105371045A0A1W2PR82 267 aa18.22■□□□□ 0.51
RAB5C-203ENST00000546881 RSPH4AQ5TD94 716 aa18.22■□□□□ 0.51
RAB5C-203ENST00000546881 WASHC2CQ9Y4E1 1318 aa18.22■□□□□ 0.51
RAB5C-203ENST00000546881 A2ML1A8K2U0 1454 aa18.21■□□□□ 0.51
RAB5C-203ENST00000546881 IQSEC2Q5JU85 1478 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms