RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 PEG3Q9GZU2 1588 aa13.66□□□□□ -0.22
SSH1-203ENST00000546433 CCDC9Q9Y3X0 531 aaKnown RBP13.65□□□□□ -0.22
SSH1-203ENST00000546433 BECN1Q14457 450 aa13.65□□□□□ -0.22
SSH1-203ENST00000546433 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
SSH1-203ENST00000546433 TEX14Q8IWB6 1497 aa13.64□□□□□ -0.23
SSH1-203ENST00000546433 ANP32EQ9BTT0 268 aa13.64□□□□□ -0.23
SSH1-203ENST00000546433 FHOD3Q2V2M9 1422 aa13.63□□□□□ -0.23
SSH1-203ENST00000546433 GLIPR1L2Q4G1C9 344 aa13.63□□□□□ -0.23
SSH1-203ENST00000546433 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.62□□□□□ -0.23
SSH1-203ENST00000546433 IGF1RP08069 1367 aa13.62□□□□□ -0.23
SSH1-203ENST00000546433 KNSTRNQ9Y448 316 aa13.6□□□□□ -0.23
SSH1-203ENST00000546433 DNAJC5Q9H3Z4 198 aa13.6□□□□□ -0.23
SSH1-203ENST00000546433 HNRNPMP52272 730 aaKnown RBP eCLIP13.6□□□□□ -0.23
SSH1-203ENST00000546433 UACAQ9BZF9 1416 aa13.59□□□□□ -0.23
SSH1-203ENST00000546433 HIRIP3Q9BW71 556 aaPredicted RBP13.59□□□□□ -0.23
SSH1-203ENST00000546433 NBR1Q14596 966 aa13.59□□□□□ -0.23
SSH1-203ENST00000546433 RGL3Q3MIN7 710 aa13.59□□□□□ -0.23
SSH1-203ENST00000546433 KIAA0586Q9BVV6 1533 aa13.59□□□□□ -0.23
SSH1-203ENST00000546433 ABCA10Q8WWZ4 1543 aa13.58□□□□□ -0.24
SSH1-203ENST00000546433 PLB1Q6P1J6 1458 aa13.58□□□□□ -0.24
SSH1-203ENST00000546433 GRIN2AQ12879 1464 aa13.57□□□□□ -0.24
SSH1-203ENST00000546433 CARD11Q9BXL7 1154 aa13.57□□□□□ -0.24
SSH1-203ENST00000546433 URB2Q14146 1524 aaKnown RBP13.57□□□□□ -0.24
SSH1-203ENST00000546433 IRX6P78412 446 aaPredicted RBP13.56□□□□□ -0.24
SSH1-203ENST00000546433 TIMELESSQ9UNS1 1208 aa13.56□□□□□ -0.24
SSH1-203ENST00000546433 PLEKHH2Q8IVE3 1493 aa13.56□□□□□ -0.24
SSH1-203ENST00000546433 GOLGA6L22H0YM25 854 aa13.55□□□□□ -0.24
SSH1-203ENST00000546433 NCLP19338 710 aaKnown RBP13.55□□□□□ -0.24
SSH1-203ENST00000546433 ARHGAP5Q13017 1502 aa13.55□□□□□ -0.24
SSH1-203ENST00000546433 WDR62O43379 1518 aa13.54□□□□□ -0.24
SSH1-203ENST00000546433 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
SSH1-203ENST00000546433 NPHP1O15259 732 aa13.54□□□□□ -0.24
SSH1-203ENST00000546433 ATF3P18847 181 aa13.54□□□□□ -0.24
SSH1-203ENST00000546433 CASC1Q6TDU7 716 aa13.53□□□□□ -0.24
SSH1-203ENST00000546433 CHMP4BQ9H444 224 aaKnown RBP13.53□□□□□ -0.24
SSH1-203ENST00000546433 CUL7Q14999 1698 aa13.52□□□□□ -0.25
SSH1-203ENST00000546433 CUX1P39880 1505 aa13.52□□□□□ -0.25
SSH1-203ENST00000546433 NUDCQ9Y266 331 aa13.52□□□□□ -0.25
SSH1-203ENST00000546433 CD109Q6YHK3 1445 aa13.52□□□□□ -0.25
SSH1-203ENST00000546433 THEMISQ8N1K5 641 aaPredicted RBP13.52□□□□□ -0.25
SSH1-203ENST00000546433 TOP2BQ02880 1626 aa13.51□□□□□ -0.25
SSH1-203ENST00000546433 AKNAQ7Z591 1439 aa13.5□□□□□ -0.25
SSH1-203ENST00000546433 MAPK8IP3Q9UPT6 1336 aa13.5□□□□□ -0.25
SSH1-203ENST00000546433 MS4A1P11836 297 aa13.5□□□□□ -0.25
SSH1-203ENST00000546433 CSB-PGBD3P0DP91 1061 aa13.49□□□□□ -0.25
SSH1-203ENST00000546433 FTSJ3Q8IY81 847 aaKnown RBP13.49□□□□□ -0.25
SSH1-203ENST00000546433 PPP4R2Q9NY27 417 aa13.48□□□□□ -0.25
SSH1-203ENST00000546433 SF3B2Q13435 895 aaKnown RBP13.48□□□□□ -0.25
SSH1-203ENST00000546433 PNNQ9H307 717 aaKnown RBP13.48□□□□□ -0.25
SSH1-203ENST00000546433 PPM1GO15355 546 aaPredicted RBP13.48□□□□□ -0.25
SSH1-203ENST00000546433 PHLDB1Q86UU1 1377 aa13.47□□□□□ -0.25
SSH1-203ENST00000546433 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
SSH1-203ENST00000546433 TRIM44Q96DX7 344 aaPredicted RBP13.46□□□□□ -0.25
SSH1-203ENST00000546433 ANKLE2Q86XL3 938 aa13.46□□□□□ -0.25
SSH1-203ENST00000546433 CDK11BP21127 795 aaKnown RBP13.46□□□□□ -0.26
SSH1-203ENST00000546433 IQGAP2Q13576 1575 aa13.45□□□□□ -0.26
SSH1-203ENST00000546433 SRPK2P78362 688 aaKnown RBP13.45□□□□□ -0.26
SSH1-203ENST00000546433 SUPT16HQ9Y5B9 1047 aaKnown RBP13.45□□□□□ -0.26
SSH1-203ENST00000546433 EFCAB5A4FU69 1503 aa13.45□□□□□ -0.26
SSH1-203ENST00000546433 ZNF608Q9ULD9 1512 aaPredicted RBP13.45□□□□□ -0.26
SSH1-203ENST00000546433 KIF21AQ7Z4S6 1674 aa13.44□□□□□ -0.26
SSH1-203ENST00000546433 ARXQ96QS3 562 aa13.44□□□□□ -0.26
SSH1-203ENST00000546433 HDGFL2Q7Z4V5 671 aaPredicted RBP13.44□□□□□ -0.26
SSH1-203ENST00000546433 NUP155O75694 1391 aa13.44□□□□□ -0.26
SSH1-203ENST00000546433 VPS8Q8N3P4 1428 aa13.44□□□□□ -0.26
SSH1-203ENST00000546433 TMF1P82094 1093 aa13.43□□□□□ -0.26
SSH1-203ENST00000546433 STK26Q9P289 416 aa13.43□□□□□ -0.26
SSH1-203ENST00000546433 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
SSH1-203ENST00000546433 VGFO15240 615 aaPredicted RBP13.42□□□□□ -0.26
SSH1-203ENST00000546433 SIN3AQ96ST3 1273 aa13.42□□□□□ -0.26
SSH1-203ENST00000546433 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
SSH1-203ENST00000546433 CCER2I3L3R5 266 aa13.41□□□□□ -0.26
SSH1-203ENST00000546433 EIF3AQ14152 1382 aaKnown RBP13.41□□□□□ -0.26
SSH1-203ENST00000546433 NGDNQ8NEJ9 315 aaKnown RBP13.4□□□□□ -0.26
SSH1-203ENST00000546433 HECW1Q76N89 1606 aa13.4□□□□□ -0.26
SSH1-203ENST00000546433 TMX4Q9H1E5 349 aaPredicted RBP13.4□□□□□ -0.26
SSH1-203ENST00000546433 EVA1CP58658 441 aa13.39□□□□□ -0.27
SSH1-203ENST00000546433 ZRSR1Q15695 479 aaKnown RBP13.39□□□□□ -0.27
SSH1-203ENST00000546433 PROSER2Q86WR7 435 aaPredicted RBP13.38□□□□□ -0.27
SSH1-203ENST00000546433 DENND4BO75064 1496 aaPredicted RBP13.37□□□□□ -0.27
SSH1-203ENST00000546433 PIP4K2BP78356 416 aa13.37□□□□□ -0.27
SSH1-203ENST00000546433 SCAPERQ9BY12 1400 aa13.37□□□□□ -0.27
SSH1-203ENST00000546433 PPP6R1Q9UPN7 881 aa13.36□□□□□ -0.27
SSH1-203ENST00000546433 PKD2Q13563 968 aa13.36□□□□□ -0.27
SSH1-203ENST00000546433 MYOM3Q5VTT5 1437 aa13.35□□□□□ -0.27
SSH1-203ENST00000546433 HMGB2P26583 209 aaKnown RBP13.35□□□□□ -0.27
SSH1-203ENST00000546433 CFAP44Q96MT7 982 aa13.35□□□□□ -0.27
SSH1-203ENST00000546433 NEUROD2Q15784 382 aa13.34□□□□□ -0.27
SSH1-203ENST00000546433 DCAF11Q8TEB1 546 aa13.34□□□□□ -0.27
SSH1-203ENST00000546433 LAS1LQ9Y4W2 734 aaKnown RBP13.34□□□□□ -0.27
SSH1-203ENST00000546433 EIF4G3O43432 1585 aaKnown RBP13.34□□□□□ -0.27
SSH1-203ENST00000546433 CC2D1BQ5T0F9 858 aaKnown RBP13.34□□□□□ -0.27
SSH1-203ENST00000546433 PSME1Q06323 249 aa13.33□□□□□ -0.27
SSH1-203ENST00000546433 TXNDC2Q86VQ3 553 aa13.33□□□□□ -0.27
SSH1-203ENST00000546433 PTMAP06454 111 aaKnown RBP13.33□□□□□ -0.28
SSH1-203ENST00000546433 FRAT1Q92837 279 aaPredicted RBP13.32□□□□□ -0.28
SSH1-203ENST00000546433 ERICH6BQ5W0A0 696 aa13.32□□□□□ -0.28
SSH1-203ENST00000546433 RAPGEF3O95398 923 aa13.31□□□□□ -0.28
SSH1-203ENST00000546433 SAFB2Q14151 953 aaKnown RBP eCLIP13.31□□□□□ -0.28
SSH1-203ENST00000546433 NOP58Q9Y2X3 529 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms