RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 POGZQ7Z3K3 1410 aa12.26□□□□□ -0.45
KDM1B-203ENST00000546309 SCAPERQ9BY12 1400 aa12.26□□□□□ -0.45
KDM1B-203ENST00000546309 TROQ12816 1431 aaPredicted RBP12.24□□□□□ -0.45
KDM1B-203ENST00000546309 FMN1Q68DA7 1419 aa12.24□□□□□ -0.45
KDM1B-203ENST00000546309 MYO5CQ9NQX4 1742 aa12.24□□□□□ -0.45
KDM1B-203ENST00000546309 CEP162Q5TB80 1403 aa12.23□□□□□ -0.45
KDM1B-203ENST00000546309 KDM5CP41229 1560 aa12.22□□□□□ -0.45
KDM1B-203ENST00000546309 ZFYVE16Q7Z3T8 1539 aa12.22□□□□□ -0.45
KDM1B-203ENST00000546309 TRAPPC8Q9Y2L5 1435 aa12.22□□□□□ -0.45
KDM1B-203ENST00000546309 AFAP1Q8N556 730 aa12.22□□□□□ -0.45
KDM1B-203ENST00000546309 CASKIN1Q8WXD9 1431 aa12.21□□□□□ -0.45
KDM1B-203ENST00000546309 CDC42BPAQ5VT25 1732 aa12.21□□□□□ -0.45
KDM1B-203ENST00000546309 CFAP74Q9C0B2 1584 aa12.21□□□□□ -0.46
KDM1B-203ENST00000546309 ABCA6Q8N139 1617 aa12.19□□□□□ -0.46
KDM1B-203ENST00000546309 ARID4BQ4LE39 1312 aaPredicted RBP12.19□□□□□ -0.46
KDM1B-203ENST00000546309 DIP2CQ9Y2E4 1556 aa12.19□□□□□ -0.46
KDM1B-203ENST00000546309 MAGI2Q86UL8 1455 aa12.19□□□□□ -0.46
KDM1B-203ENST00000546309 PREX2Q70Z35 1606 aa12.19□□□□□ -0.46
KDM1B-203ENST00000546309 HSPA2P54652 639 aa12.18□□□□□ -0.46
KDM1B-203ENST00000546309 ATP1B4Q9UN42 357 aaPredicted RBP12.18□□□□□ -0.46
KDM1B-203ENST00000546309 KIDINS220Q9ULH0 1771 aa12.18□□□□□ -0.46
KDM1B-203ENST00000546309 ATP10AO60312 1499 aa12.17□□□□□ -0.46
KDM1B-203ENST00000546309 CLIP1P30622 1438 aa12.17□□□□□ -0.46
KDM1B-203ENST00000546309 ABCC1P33527 1531 aa12.16□□□□□ -0.46
KDM1B-203ENST00000546309 FER1L4A9Z1Z3 1794 aa12.16□□□□□ -0.46
KDM1B-203ENST00000546309 CEBPAP49715 358 aaPredicted RBP12.16□□□□□ -0.46
KDM1B-203ENST00000546309 SAMD9LQ8IVG5 1584 aa12.16□□□□□ -0.46
KDM1B-203ENST00000546309 ITSN2Q9NZM3 1697 aa12.16□□□□□ -0.46
KDM1B-203ENST00000546309 MLECQ14165 292 aa12.15□□□□□ -0.46
KDM1B-203ENST00000546309 EFCAB2Q5VUJ9 269 aa12.15□□□□□ -0.46
KDM1B-203ENST00000546309 FBXO41Q8TF61 875 aa12.15□□□□□ -0.46
KDM1B-203ENST00000546309 ARHGAP5Q13017 1502 aa12.15□□□□□ -0.46
KDM1B-203ENST00000546309 GPATCH8Q9UKJ3 1502 aaKnown RBP12.15□□□□□ -0.46
KDM1B-203ENST00000546309 STRCQ7RTU9 1775 aa12.13□□□□□ -0.47
KDM1B-203ENST00000546309 MLH3Q9UHC1 1453 aa12.13□□□□□ -0.47
KDM1B-203ENST00000546309 C9orf84Q5VXU9 1444 aa12.12□□□□□ -0.47
KDM1B-203ENST00000546309 FYCO1Q9BQS8 1478 aa12.12□□□□□ -0.47
KDM1B-203ENST00000546309 REREQ9P2R6 1566 aa12.12□□□□□ -0.47
KDM1B-203ENST00000546309 ZNF518AQ6AHZ1 1483 aa12.11□□□□□ -0.47
KDM1B-203ENST00000546309 PLPPR3Q6T4P5 718 aa12.1□□□□□ -0.47
KDM1B-203ENST00000546309 ZNF644Q9H582 1327 aaPredicted RBP12.1□□□□□ -0.47
KDM1B-203ENST00000546309 C3P01024 1663 aa12.09□□□□□ -0.47
KDM1B-203ENST00000546309 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.47
KDM1B-203ENST00000546309 AGLP35573 1532 aa12.08□□□□□ -0.48
KDM1B-203ENST00000546309 SYCP2Q9BX26 1530 aa12.08□□□□□ -0.48
KDM1B-203ENST00000546309 VPS8Q8N3P4 1428 aa12.08□□□□□ -0.48
KDM1B-203ENST00000546309 TIAM1Q13009 1591 aa12.06□□□□□ -0.48
KDM1B-203ENST00000546309 HNRNPMP52272 730 aaKnown RBP eCLIP12.06□□□□□ -0.48
KDM1B-203ENST00000546309 CDK11AQ9UQ88 783 aaPredicted RBP12.06□□□□□ -0.48
KDM1B-203ENST00000546309 MBD5Q9P267 1494 aa12.06□□□□□ -0.48
KDM1B-203ENST00000546309 SETD1BQ9UPS6 1966 aaKnown RBP12.05□□□□□ -0.48
KDM1B-203ENST00000546309 PLXNC1O60486 1568 aa12.05□□□□□ -0.48
KDM1B-203ENST00000546309 INO80Q9ULG1 1556 aaPredicted RBP12.05□□□□□ -0.48
KDM1B-203ENST00000546309 PREX1Q8TCU6 1659 aa12.04□□□□□ -0.48
KDM1B-203ENST00000546309 SUPT6HQ7KZ85 1726 aaKnown RBP12.02□□□□□ -0.49
KDM1B-203ENST00000546309 KIAA1107Q9UPP5 1409 aa12.01□□□□□ -0.49
KDM1B-203ENST00000546309 ZNF777Q9ULD5 760 aaPredicted RBP12□□□□□ -0.49
KDM1B-203ENST00000546309 ATP7AQ04656 1500 aa12□□□□□ -0.49
KDM1B-203ENST00000546309 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
KDM1B-203ENST00000546309 ADGBQ8N7X0 1667 aa11.97□□□□□ -0.49
KDM1B-203ENST00000546309 MAP3K1Q13233 1512 aa11.97□□□□□ -0.49
KDM1B-203ENST00000546309 MYT1LQ9UL68 1186 aa11.97□□□□□ -0.49
KDM1B-203ENST00000546309 CLTCQ00610 1675 aaKnown RBP11.97□□□□□ -0.49
KDM1B-203ENST00000546309 LTBP4Q8N2S1 1624 aa11.97□□□□□ -0.49
KDM1B-203ENST00000546309 KANK4Q5T7N3 995 aaPredicted RBP11.96□□□□□ -0.49
KDM1B-203ENST00000546309 A2MP01023 1474 aa11.95□□□□□ -0.5
KDM1B-203ENST00000546309 SPAG9O60271 1321 aaKnown RBP11.95□□□□□ -0.5
KDM1B-203ENST00000546309 MROH2AA6NES4 1674 aa11.95□□□□□ -0.5
KDM1B-203ENST00000546309 CFDP1Q9UEE9 299 aaPredicted RBP11.95□□□□□ -0.5
KDM1B-203ENST00000546309 EHBP1L1Q8N3D4 1523 aa11.95□□□□□ -0.5
KDM1B-203ENST00000546309 NCOA2Q15596 1464 aa11.95□□□□□ -0.5
KDM1B-203ENST00000546309 PTPRKQ15262 1439 aa11.94□□□□□ -0.5
KDM1B-203ENST00000546309 ZMYM3Q14202 1370 aa11.94□□□□□ -0.5
KDM1B-203ENST00000546309 CCNB3Q8WWL7 1395 aa11.94□□□□□ -0.5
KDM1B-203ENST00000546309 CERKQ8TCT0 537 aa11.94□□□□□ -0.5
KDM1B-203ENST00000546309 NCOA1Q15788 1441 aa11.93□□□□□ -0.5
KDM1B-203ENST00000546309 MTUS2Q5JR59 1369 aa11.92□□□□□ -0.5
KDM1B-203ENST00000546309 APLP2Q06481 763 aa11.92□□□□□ -0.5
KDM1B-203ENST00000546309 CAMSAP2Q08AD1 1489 aa11.91□□□□□ -0.5
KDM1B-203ENST00000546309 UHRF1BP1Q6BDS2 1440 aa11.91□□□□□ -0.5
KDM1B-203ENST00000546309 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
KDM1B-203ENST00000546309 MYO3AQ8NEV4 1616 aa11.89□□□□□ -0.51
KDM1B-203ENST00000546309 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
KDM1B-203ENST00000546309 PLEKHH2Q8IVE3 1493 aa11.89□□□□□ -0.51
KDM1B-203ENST00000546309 PTPRTO14522 1441 aa11.89□□□□□ -0.51
KDM1B-203ENST00000546309 FBXO31Q5XUX0 539 aaPredicted RBP11.89□□□□□ -0.51
KDM1B-203ENST00000546309 ZNF142P52746 1687 aaPredicted RBP11.89□□□□□ -0.51
KDM1B-203ENST00000546309 CAMSAP1Q5T5Y3 1602 aa11.89□□□□□ -0.51
KDM1B-203ENST00000546309 MROH1Q8NDA8 1641 aa11.89□□□□□ -0.51
KDM1B-203ENST00000546309 RTEL1-TNFRSF6BF6WH68 1400 aa11.88□□□□□ -0.51
KDM1B-203ENST00000546309 NPATQ14207 1427 aa11.88□□□□□ -0.51
KDM1B-203ENST00000546309 DMRT2Q9Y5R5 561 aa11.88□□□□□ -0.51
KDM1B-203ENST00000546309 DHX29Q7Z478 1369 aaKnown RBP11.88□□□□□ -0.51
KDM1B-203ENST00000546309 NCKAP5LQ9HCH0 1330 aa11.87□□□□□ -0.51
KDM1B-203ENST00000546309 CNTLNQ9NXG0 1405 aa11.87□□□□□ -0.51
KDM1B-203ENST00000546309 TCOF1Q13428 1488 aaKnown RBP11.87□□□□□ -0.51
KDM1B-203ENST00000546309 GGT6Q6P531 493 aa11.86□□□□□ -0.51
KDM1B-203ENST00000546309 ARHGEF5Q12774 1597 aa11.86□□□□□ -0.51
KDM1B-203ENST00000546309 DNMT1P26358 1616 aaKnown RBP11.86□□□□□ -0.51
KDM1B-203ENST00000546309 NEURL4Q96JN8 1562 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms