RNA–Protein interactions for RNA: ENST00000546279.5

LMO3-233, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-233ENST00000546279 EHBP1L1Q8N3D4 1523 aa16.91■□□□□ 0.3
LMO3-233ENST00000546279 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
LMO3-233ENST00000546279 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
LMO3-233ENST00000546279 CDC42BPAQ5VT25 1732 aa16.89■□□□□ 0.29
LMO3-233ENST00000546279 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
LMO3-233ENST00000546279 PLEKHD1A6NEE1 506 aa16.87■□□□□ 0.29
LMO3-233ENST00000546279 RAPGEF3O95398 923 aa16.87■□□□□ 0.29
LMO3-233ENST00000546279 CDC42BPBQ9Y5S2 1711 aa16.87■□□□□ 0.29
LMO3-233ENST00000546279 CERKQ8TCT0 537 aa16.86■□□□□ 0.29
LMO3-233ENST00000546279 MYO5CQ9NQX4 1742 aa16.86■□□□□ 0.29
LMO3-233ENST00000546279 KANK4Q5T7N3 995 aaPredicted RBP16.85■□□□□ 0.29
LMO3-233ENST00000546279 NEO1Q92859 1461 aa16.85■□□□□ 0.29
LMO3-233ENST00000546279 PREX2Q70Z35 1606 aa16.85■□□□□ 0.29
LMO3-233ENST00000546279 BCORL1Q5H9F3 1711 aa16.84■□□□□ 0.29
LMO3-233ENST00000546279 SUPT6HQ7KZ85 1726 aaKnown RBP16.84■□□□□ 0.29
LMO3-233ENST00000546279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.84■□□□□ 0.29
LMO3-233ENST00000546279 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
LMO3-233ENST00000546279 SOCS7O14512 581 aa16.83■□□□□ 0.28
LMO3-233ENST00000546279 CDK11AQ9UQ88 783 aaPredicted RBP16.82■□□□□ 0.28
LMO3-233ENST00000546279 MADDQ8WXG6 1647 aa16.81■□□□□ 0.28
LMO3-233ENST00000546279 NCOA2Q15596 1464 aa16.8■□□□□ 0.28
LMO3-233ENST00000546279 MTUS2Q5JR59 1369 aa16.8■□□□□ 0.28
LMO3-233ENST00000546279 DISP3Q9P2K9 1392 aa16.79■□□□□ 0.28
LMO3-233ENST00000546279 KCNA4P22459 653 aa16.79■□□□□ 0.28
LMO3-233ENST00000546279 HSPA2P54652 639 aa16.79■□□□□ 0.28
LMO3-233ENST00000546279 POGZQ7Z3K3 1410 aa16.79■□□□□ 0.28
LMO3-233ENST00000546279 GPATCH8Q9UKJ3 1502 aaKnown RBP16.78■□□□□ 0.28
LMO3-233ENST00000546279 PLCH2O75038 1416 aa16.78■□□□□ 0.28
LMO3-233ENST00000546279 ITSN2Q9NZM3 1697 aa16.76■□□□□ 0.27
LMO3-233ENST00000546279 RIMS1Q86UR5 1692 aaKnown RBP16.74■□□□□ 0.27
LMO3-233ENST00000546279 CFAP74Q9C0B2 1584 aa16.73■□□□□ 0.27
LMO3-233ENST00000546279 ILDR2Q71H61 639 aa16.73■□□□□ 0.27
LMO3-233ENST00000546279 DENND4BO75064 1496 aaPredicted RBP16.73■□□□□ 0.27
LMO3-233ENST00000546279 SAMD9LQ8IVG5 1584 aa16.72■□□□□ 0.27
LMO3-233ENST00000546279 DMRT2Q9Y5R5 561 aa16.72■□□□□ 0.27
LMO3-233ENST00000546279 FANCAO15360 1455 aa16.72■□□□□ 0.27
LMO3-233ENST00000546279 FRMPD1Q5SYB0 1578 aa16.72■□□□□ 0.27
LMO3-233ENST00000546279 AKNAQ7Z591 1439 aa16.71■□□□□ 0.27
LMO3-233ENST00000546279 ARHGEF40Q8TER5 1519 aa16.71■□□□□ 0.27
LMO3-233ENST00000546279 RICTORQ6R327 1708 aa16.7■□□□□ 0.26
LMO3-233ENST00000546279 ABCC1P33527 1531 aa16.69■□□□□ 0.26
LMO3-233ENST00000546279 ARHGEF12Q9NZN5 1544 aa16.69■□□□□ 0.26
LMO3-233ENST00000546279 ARHGAP5Q13017 1502 aa16.68■□□□□ 0.26
LMO3-233ENST00000546279 MYOM3Q5VTT5 1437 aa16.68■□□□□ 0.26
LMO3-233ENST00000546279 CCNB3Q8WWL7 1395 aa16.66■□□□□ 0.26
LMO3-233ENST00000546279 APLP2Q06481 763 aa16.65■□□□□ 0.26
LMO3-233ENST00000546279 MAGI2Q86UL8 1455 aa16.65■□□□□ 0.26
LMO3-233ENST00000546279 YEATS2Q9ULM3 1422 aa16.63■□□□□ 0.25
LMO3-233ENST00000546279 MLECQ14165 292 aa16.63■□□□□ 0.25
LMO3-233ENST00000546279 MIA2Q96PC5 1412 aa16.62■□□□□ 0.25
LMO3-233ENST00000546279 TCOF1Q13428 1488 aaKnown RBP16.62■□□□□ 0.25
LMO3-233ENST00000546279 MBD5Q9P267 1494 aa16.62■□□□□ 0.25
LMO3-233ENST00000546279 ZFYVE16Q7Z3T8 1539 aa16.62■□□□□ 0.25
LMO3-233ENST00000546279 KDM5CP41229 1560 aa16.62■□□□□ 0.25
LMO3-233ENST00000546279 PTPN23Q9H3S7 1636 aa16.62■□□□□ 0.25
LMO3-233ENST00000546279 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
LMO3-233ENST00000546279 CAMSAP2Q08AD1 1489 aa16.61■□□□□ 0.25
LMO3-233ENST00000546279 ZMYM4Q5VZL5 1548 aa16.61■□□□□ 0.25
LMO3-233ENST00000546279 SYCP2Q9BX26 1530 aa16.61■□□□□ 0.25
LMO3-233ENST00000546279 EFCAB2Q5VUJ9 269 aa16.61■□□□□ 0.25
LMO3-233ENST00000546279 ZNF644Q9H582 1327 aaPredicted RBP16.6■□□□□ 0.25
LMO3-233ENST00000546279 KIAA1107Q9UPP5 1409 aa16.6■□□□□ 0.25
LMO3-233ENST00000546279 PPARGC1BQ86YN6 1023 aaKnown RBP16.59■□□□□ 0.25
LMO3-233ENST00000546279 ARHGEF5Q12774 1597 aa16.59■□□□□ 0.25
LMO3-233ENST00000546279 CFDP1Q9UEE9 299 aaPredicted RBP16.58■□□□□ 0.24
LMO3-233ENST00000546279 SCAPERQ9BY12 1400 aa16.58■□□□□ 0.24
LMO3-233ENST00000546279 TRAPPC8Q9Y2L5 1435 aa16.58■□□□□ 0.24
LMO3-233ENST00000546279 FER1L4A9Z1Z3 1794 aa16.56■□□□□ 0.24
LMO3-233ENST00000546279 CROCC2H7BZ55 1655 aa16.56■□□□□ 0.24
LMO3-233ENST00000546279 SPATA31D1Q6ZQQ2 1576 aa16.56■□□□□ 0.24
LMO3-233ENST00000546279 PLEKHH2Q8IVE3 1493 aa16.56■□□□□ 0.24
LMO3-233ENST00000546279 KIDINS220Q9ULH0 1771 aa16.56■□□□□ 0.24
LMO3-233ENST00000546279 PREX1Q8TCU6 1659 aa16.56■□□□□ 0.24
LMO3-233ENST00000546279 INO80Q9ULG1 1556 aaPredicted RBP16.55■□□□□ 0.24
LMO3-233ENST00000546279 RRBP1Q9P2E9 1410 aaKnown RBP16.54■□□□□ 0.24
LMO3-233ENST00000546279 DNMT1P26358 1616 aaKnown RBP16.54■□□□□ 0.24
LMO3-233ENST00000546279 ATP10AO60312 1499 aa16.54■□□□□ 0.24
LMO3-233ENST00000546279 ZNF518AQ6AHZ1 1483 aa16.53■□□□□ 0.24
LMO3-233ENST00000546279 SIGLEC1Q9BZZ2 1709 aa16.53■□□□□ 0.24
LMO3-233ENST00000546279 UHRF1BP1Q6BDS2 1440 aa16.53■□□□□ 0.24
LMO3-233ENST00000546279 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.24
LMO3-233ENST00000546279 PTPRTO14522 1441 aa16.52■□□□□ 0.23
LMO3-233ENST00000546279 MAST1Q9Y2H9 1570 aa16.51■□□□□ 0.23
LMO3-233ENST00000546279 CEBPAP49715 358 aaPredicted RBP16.51■□□□□ 0.23
LMO3-233ENST00000546279 C9orf84Q5VXU9 1444 aa16.51■□□□□ 0.23
LMO3-233ENST00000546279 MLH3Q9UHC1 1453 aa16.5■□□□□ 0.23
LMO3-233ENST00000546279 ABCA6Q8N139 1617 aa16.5■□□□□ 0.23
LMO3-233ENST00000546279 SETD1BQ9UPS6 1966 aaKnown RBP16.49■□□□□ 0.23
LMO3-233ENST00000546279 CCDC141Q6ZP82 1450 aa16.49■□□□□ 0.23
LMO3-233ENST00000546279 HNRNPMP52272 730 aaKnown RBP eCLIP16.49■□□□□ 0.23
LMO3-233ENST00000546279 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
LMO3-233ENST00000546279 DIP2CQ9Y2E4 1556 aa16.49■□□□□ 0.23
LMO3-233ENST00000546279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.49■□□□□ 0.23
LMO3-233ENST00000546279 STRCQ7RTU9 1775 aa16.49■□□□□ 0.23
LMO3-233ENST00000546279 IQSEC2Q5JU85 1478 aa16.48■□□□□ 0.23
LMO3-233ENST00000546279 ABCC5O15440 1437 aa16.48■□□□□ 0.23
LMO3-233ENST00000546279 AFAP1Q8N556 730 aa16.48■□□□□ 0.23
LMO3-233ENST00000546279 ADGBQ8N7X0 1667 aa16.48■□□□□ 0.23
LMO3-233ENST00000546279 ATP7AQ04656 1500 aa16.46■□□□□ 0.23
LMO3-233ENST00000546279 SHANK2Q9UPX8 1470 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms