RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 SENP3Q9H4L4 574 aaPredicted RBP15.67■□□□□ 0.1
NPC1L1-204ENST00000546276 PRKRIP1Q9H875 184 aaPredicted RBP15.67■□□□□ 0.1
NPC1L1-204ENST00000546276 ZBED9Q6R2W3 1325 aa15.67■□□□□ 0.1
NPC1L1-204ENST00000546276 ERCC6Q03468 1493 aa15.65■□□□□ 0.1
NPC1L1-204ENST00000546276 NLRP13Q86W25 1043 aa15.65■□□□□ 0.1
NPC1L1-204ENST00000546276 NUP155O75694 1391 aa15.64■□□□□ 0.09
NPC1L1-204ENST00000546276 DNTTIP2Q5QJE6 756 aaKnown RBP15.63■□□□□ 0.09
NPC1L1-204ENST00000546276 U2SURPO15042 1029 aaKnown RBP15.63■□□□□ 0.09
NPC1L1-204ENST00000546276 ANKRD30AQ9BXX3 1397 aa15.63■□□□□ 0.09
NPC1L1-204ENST00000546276 USP35Q9P2H5 1018 aa15.62■□□□□ 0.09
NPC1L1-204ENST00000546276 MORC1Q86VD1 984 aa15.61■□□□□ 0.09
NPC1L1-204ENST00000546276 SPRYD3Q8NCJ5 442 aa15.61■□□□□ 0.09
NPC1L1-204ENST00000546276 CCDC18Q5T9S5 1454 aa15.61■□□□□ 0.09
NPC1L1-204ENST00000546276 PNNQ9H307 717 aaKnown RBP15.6■□□□□ 0.09
NPC1L1-204ENST00000546276 KIF15Q9NS87 1388 aa15.6■□□□□ 0.09
NPC1L1-204ENST00000546276 ATAD2BQ9ULI0 1458 aa15.6■□□□□ 0.09
NPC1L1-204ENST00000546276 KIF21BO75037 1637 aa15.59■□□□□ 0.09
NPC1L1-204ENST00000546276 TDRD9Q8NDG6 1382 aaKnown RBP15.59■□□□□ 0.09
NPC1L1-204ENST00000546276 SLKQ9H2G2 1235 aaPredicted RBP15.59■□□□□ 0.09
NPC1L1-204ENST00000546276 MYBBP1AQ9BQG0 1328 aaKnown RBP15.58■□□□□ 0.08
NPC1L1-204ENST00000546276 GOLGA2Q08379 1002 aa15.58■□□□□ 0.08
NPC1L1-204ENST00000546276 PDE4AP27815 886 aa15.57■□□□□ 0.08
NPC1L1-204ENST00000546276 RWDD1Q9H446 243 aaPredicted RBP15.57■□□□□ 0.08
NPC1L1-204ENST00000546276 PHLDB1Q86UU1 1377 aa15.57■□□□□ 0.08
NPC1L1-204ENST00000546276 ARID4BQ4LE39 1312 aaPredicted RBP15.56■□□□□ 0.08
NPC1L1-204ENST00000546276 POGKQ9P215 609 aa15.56■□□□□ 0.08
NPC1L1-204ENST00000546276 KANK1Q14678 1352 aa15.56■□□□□ 0.08
NPC1L1-204ENST00000546276 RRP1P56182 461 aaKnown RBP15.55■□□□□ 0.08
NPC1L1-204ENST00000546276 PLPPR3Q6T4P5 718 aa15.55■□□□□ 0.08
NPC1L1-204ENST00000546276 MSNP26038 577 aaKnown RBP15.54■□□□□ 0.08
NPC1L1-204ENST00000546276 PMFBP1Q8TBY8 1022 aa15.54■□□□□ 0.08
NPC1L1-204ENST00000546276 TPRNQ4KMQ1 711 aa15.53■□□□□ 0.08
NPC1L1-204ENST00000546276 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.53■□□□□ 0.08
NPC1L1-204ENST00000546276 CADPSQ9ULU8 1353 aa15.53■□□□□ 0.08
NPC1L1-204ENST00000546276 EXOC6Q8TAG9 804 aa15.53■□□□□ 0.08
NPC1L1-204ENST00000546276 GBP4Q96PP9 640 aa15.53■□□□□ 0.08
NPC1L1-204ENST00000546276 CFAP44Q96MT7 982 aa15.52■□□□□ 0.07
NPC1L1-204ENST00000546276 GZF1Q9H116 711 aaPredicted RBP15.52■□□□□ 0.07
NPC1L1-204ENST00000546276 IPO8O15397 1037 aaKnown RBP15.52■□□□□ 0.07
NPC1L1-204ENST00000546276 PDS5BQ9NTI5 1447 aa15.51■□□□□ 0.07
NPC1L1-204ENST00000546276 PTMSP20962 102 aa15.51■□□□□ 0.07
NPC1L1-204ENST00000546276 ST20-MTHFSA0A0A6YYL1 179 aa15.51■□□□□ 0.07
NPC1L1-204ENST00000546276 CENPQQ7L2Z9 268 aaPredicted RBP15.5■□□□□ 0.07
NPC1L1-204ENST00000546276 CARMIL2Q6F5E8 1435 aa15.5■□□□□ 0.07
NPC1L1-204ENST00000546276 GOLGA6L3A6NEY3 463 aa15.5■□□□□ 0.07
NPC1L1-204ENST00000546276 PLCB2Q00722 1185 aa15.5■□□□□ 0.07
NPC1L1-204ENST00000546276 USP47Q96K76 1375 aa15.49■□□□□ 0.07
NPC1L1-204ENST00000546276 ZRSR1Q15695 479 aaKnown RBP15.49■□□□□ 0.07
NPC1L1-204ENST00000546276 FAM161AQ3B820 660 aa15.48■□□□□ 0.07
NPC1L1-204ENST00000546276 RRBP1Q9P2E9 1410 aaKnown RBP15.47■□□□□ 0.07
NPC1L1-204ENST00000546276 CENPJQ9HC77 1338 aaPredicted RBP15.47■□□□□ 0.07
NPC1L1-204ENST00000546276 UACAQ9BZF9 1416 aa15.47■□□□□ 0.07
NPC1L1-204ENST00000546276 U2AF1L5P0DN76 240 aaPredicted RBP15.47■□□□□ 0.07
NPC1L1-204ENST00000546276 U2AF1Q01081 240 aaKnown RBP eCLIP15.47■□□□□ 0.07
NPC1L1-204ENST00000546276 GSE1Q14687 1217 aa15.47■□□□□ 0.07
NPC1L1-204ENST00000546276 ITPRIPQ8IWB1 547 aa15.47■□□□□ 0.07
NPC1L1-204ENST00000546276 CCDC7Q96M83 1385 aa15.47■□□□□ 0.07
NPC1L1-204ENST00000546276 EIF3AQ14152 1382 aaKnown RBP15.46■□□□□ 0.07
NPC1L1-204ENST00000546276 SRPK2P78362 688 aaKnown RBP15.46■□□□□ 0.07
NPC1L1-204ENST00000546276 C14orf37Q86TY3 774 aa15.46■□□□□ 0.07
NPC1L1-204ENST00000546276 CNTLNQ9NXG0 1405 aa15.46■□□□□ 0.07
NPC1L1-204ENST00000546276 CCDC146Q8IYE0 955 aa15.46■□□□□ 0.07
NPC1L1-204ENST00000546276 PLIN1O60240 522 aa15.46■□□□□ 0.07
NPC1L1-204ENST00000546276 MFAP1P55081 439 aaKnown RBP15.46■□□□□ 0.06
NPC1L1-204ENST00000546276 FGD6Q6ZV73 1430 aa15.46■□□□□ 0.06
NPC1L1-204ENST00000546276 CRBNQ96SW2 442 aa15.45■□□□□ 0.06
NPC1L1-204ENST00000546276 ZBTB7CA1YPR0 619 aa15.45■□□□□ 0.06
NPC1L1-204ENST00000546276 LRRC9Q6ZRR7 1453 aa15.45■□□□□ 0.06
NPC1L1-204ENST00000546276 IGF1RP08069 1367 aa15.44■□□□□ 0.06
NPC1L1-204ENST00000546276 MCCP23508 829 aa15.44■□□□□ 0.06
NPC1L1-204ENST00000546276 SLC4A3P48751 1232 aa15.43■□□□□ 0.06
NPC1L1-204ENST00000546276 HAP1P54257 671 aaPredicted RBP15.43■□□□□ 0.06
NPC1L1-204ENST00000546276 PANK3Q9H999 370 aa15.43■□□□□ 0.06
NPC1L1-204ENST00000546276 KIF7Q2M1P5 1343 aa15.42■□□□□ 0.06
NPC1L1-204ENST00000546276 HNRNPMP52272 730 aaKnown RBP eCLIP15.42■□□□□ 0.06
NPC1L1-204ENST00000546276 CLUAP1Q96AJ1 413 aa15.41■□□□□ 0.06
NPC1L1-204ENST00000546276 SMC4Q9NTJ3 1288 aa15.41■□□□□ 0.06
NPC1L1-204ENST00000546276 WASHC2AQ641Q2 1341 aa15.41■□□□□ 0.06
NPC1L1-204ENST00000546276 RSPH4AQ5TD94 716 aa15.41■□□□□ 0.06
NPC1L1-204ENST00000546276 CHAF1AQ13111 956 aaPredicted RBP15.41■□□□□ 0.06
NPC1L1-204ENST00000546276 SAFB2Q14151 953 aaKnown RBP eCLIP15.41■□□□□ 0.06
NPC1L1-204ENST00000546276 MYOM3Q5VTT5 1437 aa15.4■□□□□ 0.06
NPC1L1-204ENST00000546276 CALD1Q05682 793 aaKnown RBP15.39■□□□□ 0.05
NPC1L1-204ENST00000546276 OS9Q13438 667 aaPredicted RBP15.39■□□□□ 0.05
NPC1L1-204ENST00000546276 ARAP1Q96P48 1450 aa15.39■□□□□ 0.05
NPC1L1-204ENST00000546276 ERICH3Q5RHP9 1530 aa15.39■□□□□ 0.05
NPC1L1-204ENST00000546276 CCDC144AA2RUR9 1427 aa15.39■□□□□ 0.05
NPC1L1-204ENST00000546276 KCNJ4P48050 445 aa15.38■□□□□ 0.05
NPC1L1-204ENST00000546276 EFCAB2Q5VUJ9 269 aa15.38■□□□□ 0.05
NPC1L1-204ENST00000546276 RSPH6AQ9H0K4 717 aa15.37■□□□□ 0.05
NPC1L1-204ENST00000546276 CUX1P39880 1505 aa15.37■□□□□ 0.05
NPC1L1-204ENST00000546276 HDGFL2Q7Z4V5 671 aaPredicted RBP15.37■□□□□ 0.05
NPC1L1-204ENST00000546276 GOLGA6L4A6NEF3 574 aa15.37■□□□□ 0.05
NPC1L1-204ENST00000546276 GOLGA6L6A8MZA4 724 aa15.37■□□□□ 0.05
NPC1L1-204ENST00000546276 E9PSI1 815 aa15.36■□□□□ 0.05
NPC1L1-204ENST00000546276 CGNL1Q0VF96 1302 aa15.36■□□□□ 0.05
NPC1L1-204ENST00000546276 PLEKHG5O94827 1062 aa15.36■□□□□ 0.05
NPC1L1-204ENST00000546276 APBB1O00213 710 aa15.36■□□□□ 0.05
NPC1L1-204ENST00000546276 DDX11L8A8MPP1 907 aa15.35■□□□□ 0.05
NPC1L1-204ENST00000546276 FGD1P98174 961 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms