RNA–Protein interactions for RNA: ENST00000546248.5

TRDN-205, Transcript of triadin, humanhuman

TSL 1 (best) BASIC

Gene TRDN, Length 1,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-205ENST00000546248 HS3ST6Q96QI5 342 aa12.45□□□□□ -0.42
TRDN-205ENST00000546248 ZNF710Q8N1W2 664 aa12.44□□□□□ -0.42
TRDN-205ENST00000546248 HOXB1P14653 301 aaPredicted RBP12.43□□□□□ -0.42
TRDN-205ENST00000546248 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
TRDN-205ENST00000546248 KRTAP3-3Q9BYR6 98 aa12.37□□□□□ -0.43
TRDN-205ENST00000546248 KRTAP3-2Q9BYR7 98 aa12.37□□□□□ -0.43
TRDN-205ENST00000546248 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
TRDN-205ENST00000546248 KIF3CO14782 793 aa12.32□□□□□ -0.44
TRDN-205ENST00000546248 PPP1R37O75864 691 aa12.32□□□□□ -0.44
TRDN-205ENST00000546248 GPR153Q6NV75 609 aa12.32□□□□□ -0.44
TRDN-205ENST00000546248 ZSWIM6Q9HCJ5 1215 aa12.32□□□□□ -0.44
TRDN-205ENST00000546248 MMRN1Q13201 1228 aa12.31□□□□□ -0.44
TRDN-205ENST00000546248 ERBB3P21860 1342 aa12.31□□□□□ -0.44
TRDN-205ENST00000546248 C2orf72A6NCS6 295 aa12.3□□□□□ -0.44
TRDN-205ENST00000546248 HS6ST3Q8IZP7 471 aa12.28□□□□□ -0.44
TRDN-205ENST00000546248 ARSIQ5FYB1 569 aa12.27□□□□□ -0.45
TRDN-205ENST00000546248 VARS2Q5ST30 1063 aaKnown RBP12.27□□□□□ -0.45
TRDN-205ENST00000546248 KHSRPQ92945 711 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRDN-205ENST00000546248 CHGAP10645 457 aaKnown RBP12.23□□□□□ -0.45
TRDN-205ENST00000546248 TMC2Q8TDI7 906 aa12.19□□□□□ -0.46
TRDN-205ENST00000546248 NKX1-1Q15270 411 aaPredicted RBP12.17□□□□□ -0.46
TRDN-205ENST00000546248 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
TRDN-205ENST00000546248 ZNF316A6NFI3 1004 aaPredicted RBP12.15□□□□□ -0.46
TRDN-205ENST00000546248 DNAJC5Q9H3Z4 198 aa12.14□□□□□ -0.47
TRDN-205ENST00000546248 SLC34A2O95436 690 aa12.13□□□□□ -0.47
TRDN-205ENST00000546248 NUDT7P0C024 238 aa12.13□□□□□ -0.47
TRDN-205ENST00000546248 PCDHGA4Q9Y5G9 962 aa12.13□□□□□ -0.47
TRDN-205ENST00000546248 LHX6Q9UPM6 363 aa12.07□□□□□ -0.48
TRDN-205ENST00000546248 FOXK1P85037 733 aa12.06□□□□□ -0.48
TRDN-205ENST00000546248 GPHNQ9NQX3 736 aaPredicted RBP12.06□□□□□ -0.48
TRDN-205ENST00000546248 PLPP6Q8IY26 295 aa12.04□□□□□ -0.48
TRDN-205ENST00000546248 DSG2Q14126 1118 aa12.03□□□□□ -0.48
TRDN-205ENST00000546248 PTCD2Q8WV60 388 aaKnown RBP12.01□□□□□ -0.49
TRDN-205ENST00000546248 KDM4FA0A1W2PPD8 638 aa12□□□□□ -0.49
TRDN-205ENST00000546248 POTEEQ6S8J3 1075 aa12□□□□□ -0.49
TRDN-205ENST00000546248 ANKRD13DQ6ZTN6 518 aa11.98□□□□□ -0.49
TRDN-205ENST00000546248 RYDENQ9NUL5 291 aaKnown RBP11.98□□□□□ -0.49
TRDN-205ENST00000546248 LSM11P83369 360 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRDN-205ENST00000546248 RNF166Q96A37 237 aaPredicted RBP11.97□□□□□ -0.49
TRDN-205ENST00000546248 MYT1LQ9UL68 1186 aa11.97□□□□□ -0.49
TRDN-205ENST00000546248 GTPBP6O43824 516 aaPredicted RBP11.96□□□□□ -0.49
TRDN-205ENST00000546248 AXIN2Q9Y2T1 843 aa11.96□□□□□ -0.49
TRDN-205ENST00000546248 CRISPLD2Q9H0B8 497 aa11.95□□□□□ -0.5
TRDN-205ENST00000546248 DCAF8L2P0C7V8 631 aa11.94□□□□□ -0.5
TRDN-205ENST00000546248 PBX2P40425 430 aa11.93□□□□□ -0.5
TRDN-205ENST00000546248 NCKAP5LQ9HCH0 1330 aa11.92□□□□□ -0.5
TRDN-205ENST00000546248 PTGER2P43116 358 aa11.89□□□□□ -0.51
TRDN-205ENST00000546248 PPP1R15BQ5SWA1 713 aa11.89□□□□□ -0.51
TRDN-205ENST00000546248 PSDA5PKW4 1024 aaPredicted RBP11.88□□□□□ -0.51
TRDN-205ENST00000546248 TBC1D12O60347 775 aa11.88□□□□□ -0.51
TRDN-205ENST00000546248 OXER1Q8TDS5 423 aa11.88□□□□□ -0.51
TRDN-205ENST00000546248 UPF1Q92900 1129 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRDN-205ENST00000546248 RTN4Q9NQC3 1192 aaKnown RBP11.87□□□□□ -0.51
TRDN-205ENST00000546248 ARHGAP33O14559 1287 aa11.85□□□□□ -0.51
TRDN-205ENST00000546248 PDE4AP27815 886 aa11.85□□□□□ -0.51
TRDN-205ENST00000546248 AMER1Q5JTC6 1135 aaPredicted RBP11.84□□□□□ -0.51
TRDN-205ENST00000546248 PSEN2P49810 448 aa11.83□□□□□ -0.52
TRDN-205ENST00000546248 PPP4R3BQ5MIZ7 849 aa11.81□□□□□ -0.52
TRDN-205ENST00000546248 DMRTA1Q5VZB9 504 aa11.81□□□□□ -0.52
TRDN-205ENST00000546248 ADGRD1Q6QNK2 874 aa11.8□□□□□ -0.52
TRDN-205ENST00000546248 LARP6Q9BRS8 491 aaKnown RBP11.8□□□□□ -0.52
TRDN-205ENST00000546248 CADPS2Q86UW7 1296 aa11.78□□□□□ -0.52
TRDN-205ENST00000546248 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
TRDN-205ENST00000546248 MFSD10Q14728 455 aa11.77□□□□□ -0.53
TRDN-205ENST00000546248 ZNF454Q8N9F8 522 aa11.75□□□□□ -0.53
TRDN-205ENST00000546248 NISCHQ9Y2I1 1504 aa11.75□□□□□ -0.53
TRDN-205ENST00000546248 TK2O00142 265 aa11.74□□□□□ -0.53
TRDN-205ENST00000546248 KCNK17Q96T54 332 aa11.74□□□□□ -0.53
TRDN-205ENST00000546248 HRO43593 1189 aa11.73□□□□□ -0.53
TRDN-205ENST00000546248 FOSBP53539 338 aa11.72□□□□□ -0.53
TRDN-205ENST00000546248 ANO8Q9HCE9 1232 aaPredicted RBP11.72□□□□□ -0.53
TRDN-205ENST00000546248 EVI5O60447 810 aa11.71□□□□□ -0.53
TRDN-205ENST00000546248 EMILIN3Q9NT22 766 aa11.71□□□□□ -0.53
TRDN-205ENST00000546248 BCL2L12Q9HB09 334 aa11.68□□□□□ -0.54
TRDN-205ENST00000546248 MAP3K9P80192 1104 aa11.67□□□□□ -0.54
TRDN-205ENST00000546248 JPH4Q96JJ6 628 aa11.67□□□□□ -0.54
TRDN-205ENST00000546248 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.54
TRDN-205ENST00000546248 KCNH8Q96L42 1107 aa11.65□□□□□ -0.54
TRDN-205ENST00000546248 VPS9D1Q9Y2B5 631 aa11.65□□□□□ -0.54
TRDN-205ENST00000546248 ADAM33Q9BZ11 813 aa11.63□□□□□ -0.55
TRDN-205ENST00000546248 ZDHHC16Q969W1 377 aa11.62□□□□□ -0.55
TRDN-205ENST00000546248 PTPREP23469 700 aa11.61□□□□□ -0.55
TRDN-205ENST00000546248 HCSTQ9UBK5 93 aa11.61□□□□□ -0.55
TRDN-205ENST00000546248 CAMK2BQ13554 666 aa11.59□□□□□ -0.55
TRDN-205ENST00000546248 KCTD12Q96CX2 325 aaKnown RBP11.59□□□□□ -0.55
TRDN-205ENST00000546248 ZBED2Q9BTP6 218 aa11.59□□□□□ -0.55
TRDN-205ENST00000546248 SLC4A5Q9BY07 1137 aa11.59□□□□□ -0.55
TRDN-205ENST00000546248 PCDHGA10Q9Y5H3 936 aa11.58□□□□□ -0.56
TRDN-205ENST00000546248 STAC3Q96MF2 364 aa11.57□□□□□ -0.56
TRDN-205ENST00000546248 BHMG1C9JSJ3 638 aaPredicted RBP11.55□□□□□ -0.56
TRDN-205ENST00000546248 DPYSL4O14531 572 aa11.54□□□□□ -0.56
TRDN-205ENST00000546248 PLA2G2EQ9NZK7 142 aa11.53□□□□□ -0.56
TRDN-205ENST00000546248 SPRYD3Q8NCJ5 442 aa11.52□□□□□ -0.57
TRDN-205ENST00000546248 PHF14O94880 888 aa11.5□□□□□ -0.57
TRDN-205ENST00000546248 COL9A1P20849 921 aa11.5□□□□□ -0.57
TRDN-205ENST00000546248 TYW1BQ6NUM6 668 aa11.5□□□□□ -0.57
TRDN-205ENST00000546248 PPP1R3GB7ZBB8 358 aa11.49□□□□□ -0.57
TRDN-205ENST00000546248 PTPN5P54829 565 aa11.48□□□□□ -0.57
TRDN-205ENST00000546248 FBXW7Q969H0 707 aa11.48□□□□□ -0.57
TRDN-205ENST00000546248 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms