RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 PREX2Q70Z35 1606 aa32.48■■■□□ 2.79
SCARB1-211ENST00000546215 COL17A1Q9UMD9 1497 aaPredicted RBP32.47■■■□□ 2.79
SCARB1-211ENST00000546215 EFCAB2Q5VUJ9 269 aa32.46■■■□□ 2.79
SCARB1-211ENST00000546215 KDM6BO15054 1643 aa32.46■■■□□ 2.79
SCARB1-211ENST00000546215 ARHGAP5Q13017 1502 aa32.45■■■□□ 2.79
SCARB1-211ENST00000546215 AKNAQ7Z591 1439 aa32.45■■■□□ 2.79
SCARB1-211ENST00000546215 CFAP74Q9C0B2 1584 aa32.45■■■□□ 2.78
SCARB1-211ENST00000546215 CFDP1Q9UEE9 299 aaPredicted RBP32.38■■■□□ 2.77
SCARB1-211ENST00000546215 ITSN2Q9NZM3 1697 aa32.35■■■□□ 2.77
SCARB1-211ENST00000546215 ADGRL1O94910 1474 aa32.34■■■□□ 2.77
SCARB1-211ENST00000546215 SCAPERQ9BY12 1400 aa32.31■■■□□ 2.76
SCARB1-211ENST00000546215 ZNF777Q9ULD5 760 aaPredicted RBP32.31■■■□□ 2.76
SCARB1-211ENST00000546215 RAPGEF3O95398 923 aa32.3■■■□□ 2.76
SCARB1-211ENST00000546215 DENND4BO75064 1496 aaPredicted RBP32.29■■■□□ 2.76
SCARB1-211ENST00000546215 SAMD9LQ8IVG5 1584 aa32.29■■■□□ 2.76
SCARB1-211ENST00000546215 PPARGC1BQ86YN6 1023 aaKnown RBP32.28■■■□□ 2.76
SCARB1-211ENST00000546215 MYOM3Q5VTT5 1437 aa32.28■■■□□ 2.76
SCARB1-211ENST00000546215 ABCC1P33527 1531 aa32.26■■■□□ 2.75
SCARB1-211ENST00000546215 ZNF644Q9H582 1327 aaPredicted RBP32.25■■■□□ 2.75
SCARB1-211ENST00000546215 ARHGEF12Q9NZN5 1544 aa32.24■■■□□ 2.75
SCARB1-211ENST00000546215 FRMPD1Q5SYB0 1578 aa32.24■■■□□ 2.75
SCARB1-211ENST00000546215 RICTORQ6R327 1708 aa32.23■■■□□ 2.75
SCARB1-211ENST00000546215 POGZQ7Z3K3 1410 aa32.22■■■□□ 2.75
SCARB1-211ENST00000546215 MIA2Q96PC5 1412 aa32.22■■■□□ 2.75
SCARB1-211ENST00000546215 KIAA1107Q9UPP5 1409 aa32.21■■■□□ 2.75
SCARB1-211ENST00000546215 PLEKHH2Q8IVE3 1493 aa32.2■■■□□ 2.75
SCARB1-211ENST00000546215 HNRNPMP52272 730 aaKnown RBP eCLIP32.18■■■□□ 2.745e-9■■■■□ 25.7
SCARB1-211ENST00000546215 SYCP2Q9BX26 1530 aa32.18■■■□□ 2.74
SCARB1-211ENST00000546215 TRAPPC8Q9Y2L5 1435 aa32.17■■■□□ 2.74
SCARB1-211ENST00000546215 AFAP1Q8N556 730 aa32.16■■■□□ 2.74
SCARB1-211ENST00000546215 CAMSAP2Q08AD1 1489 aa32.16■■■□□ 2.74
SCARB1-211ENST00000546215 ZNF518AQ6AHZ1 1483 aa32.15■■■□□ 2.74
SCARB1-211ENST00000546215 FGD6Q6ZV73 1430 aa32.14■■■□□ 2.74
SCARB1-211ENST00000546215 MBD5Q9P267 1494 aa32.12■■■□□ 2.73
SCARB1-211ENST00000546215 ZMYM4Q5VZL5 1548 aa32.11■■■□□ 2.73
SCARB1-211ENST00000546215 KDM5CP41229 1560 aa32.1■■■□□ 2.73
SCARB1-211ENST00000546215 PTPN23Q9H3S7 1636 aa32.08■■■□□ 2.73
SCARB1-211ENST00000546215 MAGI2Q86UL8 1455 aa32.05■■■□□ 2.72
SCARB1-211ENST00000546215 TCOF1Q13428 1488 aaKnown RBP32.04■■■□□ 2.72
SCARB1-211ENST00000546215 RSPH4AQ5TD94 716 aa32.02■■■□□ 2.72
SCARB1-211ENST00000546215 MLH3Q9UHC1 1453 aa32.01■■■□□ 2.72
SCARB1-211ENST00000546215 ARHGEF5Q12774 1597 aa32.01■■■□□ 2.71
SCARB1-211ENST00000546215 YEATS2Q9ULM3 1422 aa32■■■□□ 2.71
SCARB1-211ENST00000546215 HECW2Q9P2P5 1572 aa31.99■■■□□ 2.71
SCARB1-211ENST00000546215 CCDC141Q6ZP82 1450 aa31.99■■■□□ 2.71
SCARB1-211ENST00000546215 ZFYVE16Q7Z3T8 1539 aa31.98■■■□□ 2.71
SCARB1-211ENST00000546215 SPAG9O60271 1321 aaKnown RBP31.98■■■□□ 2.71
SCARB1-211ENST00000546215 ARHGEF40Q8TER5 1519 aa31.97■■■□□ 2.71
SCARB1-211ENST00000546215 MYT1LQ9UL68 1186 aa31.94■■■□□ 2.7
SCARB1-211ENST00000546215 KIDINS220Q9ULH0 1771 aa31.94■■■□□ 2.7
SCARB1-211ENST00000546215 FAM50AQ14320 339 aaKnown RBP31.93■■■□□ 2.7
SCARB1-211ENST00000546215 INO80Q9ULG1 1556 aaPredicted RBP31.91■■■□□ 2.7
SCARB1-211ENST00000546215 ATP7AQ04656 1500 aa31.9■■■□□ 2.7
SCARB1-211ENST00000546215 TSPY4P0CV99 314 aa31.9■■■□□ 2.7
SCARB1-211ENST00000546215 TSPY10P0CW01 314 aa31.9■■■□□ 2.7
SCARB1-211ENST00000546215 RTEL1-TNFRSF6BF6WH68 1400 aa31.89■■■□□ 2.7
SCARB1-211ENST00000546215 ABCC5O15440 1437 aa31.89■■■□□ 2.7
SCARB1-211ENST00000546215 RRBP1Q9P2E9 1410 aaKnown RBP31.88■■■□□ 2.69
SCARB1-211ENST00000546215 DIP2CQ9Y2E4 1556 aa31.88■■■□□ 2.69
SCARB1-211ENST00000546215 ATP10AO60312 1499 aa31.87■■■□□ 2.69
SCARB1-211ENST00000546215 ABCA6Q8N139 1617 aa31.87■■■□□ 2.69
SCARB1-211ENST00000546215 DNMT1P26358 1616 aaKnown RBP31.87■■■□□ 2.69
SCARB1-211ENST00000546215 DAPK1P53355 1430 aa31.86■■■□□ 2.69
SCARB1-211ENST00000546215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.85■■■□□ 2.693e-11■■■□□ 17
SCARB1-211ENST00000546215 MAST1Q9Y2H9 1570 aa31.83■■■□□ 2.69
SCARB1-211ENST00000546215 C9orf84Q5VXU9 1444 aa31.82■■■□□ 2.68
SCARB1-211ENST00000546215 CROCC2H7BZ55 1655 aa31.81■■■□□ 2.68
SCARB1-211ENST00000546215 SHANK2Q9UPX8 1470 aa31.8■■■□□ 2.68
SCARB1-211ENST00000546215 SIGLEC1Q9BZZ2 1709 aa31.78■■■□□ 2.68
SCARB1-211ENST00000546215 REREQ9P2R6 1566 aa31.77■■■□□ 2.68
SCARB1-211ENST00000546215 ARID4BQ4LE39 1312 aaPredicted RBP31.73■■■□□ 2.67
SCARB1-211ENST00000546215 PTPRKQ15262 1439 aa31.72■■■□□ 2.67
SCARB1-211ENST00000546215 ADGBQ8N7X0 1667 aa31.72■■■□□ 2.67
SCARB1-211ENST00000546215 A2MP01023 1474 aa31.72■■■□□ 2.67
SCARB1-211ENST00000546215 CHIC2Q9UKJ5 165 aa31.72■■■□□ 2.67
SCARB1-211ENST00000546215 PLXNC1O60486 1568 aa31.69■■■□□ 2.66
SCARB1-211ENST00000546215 DHX29Q7Z478 1369 aaKnown RBP31.68■■■□□ 2.66
SCARB1-211ENST00000546215 AGLP35573 1532 aa31.67■■■□□ 2.66
SCARB1-211ENST00000546215 ITGAEP38570 1179 aa31.67■■■□□ 2.66
SCARB1-211ENST00000546215 ADGRL2O95490 1459 aa31.66■■■□□ 2.66
SCARB1-211ENST00000546215 NCOA1Q15788 1441 aa31.65■■■□□ 2.66
SCARB1-211ENST00000546215 ANKRD30AQ9BXX3 1397 aa31.65■■■□□ 2.66
SCARB1-211ENST00000546215 RRP7BPQ9NSQ0 103 aa31.64■■■□□ 2.66
SCARB1-211ENST00000546215 KDM4FA0A1W2PPD8 638 aa31.64■■■□□ 2.65
SCARB1-211ENST00000546215 KIF15Q9NS87 1388 aa31.63■■■□□ 2.65
SCARB1-211ENST00000546215 BCORL1Q5H9F3 1711 aa31.63■■■□□ 2.65
SCARB1-211ENST00000546215 MLECQ14165 292 aa31.59■■■□□ 2.65
SCARB1-211ENST00000546215 DUOX2Q9NRD8 1548 aa31.59■■■□□ 2.65
SCARB1-211ENST00000546215 ROCK1Q13464 1354 aa31.57■■■□□ 2.64
SCARB1-211ENST00000546215 ADAMTSL3P82987 1691 aa31.56■■■□□ 2.64
SCARB1-211ENST00000546215 KIF3BO15066 747 aa31.53■■■□□ 2.64
SCARB1-211ENST00000546215 ERBINQ96RT1 1412 aa31.5■■■□□ 2.63
SCARB1-211ENST00000546215 EIF2AK4Q9P2K8 1649 aaKnown RBP31.48■■■□□ 2.63
SCARB1-211ENST00000546215 GGT6Q6P531 493 aa31.47■■■□□ 2.63
SCARB1-211ENST00000546215 MADDQ8WXG6 1647 aa31.47■■■□□ 2.63
SCARB1-211ENST00000546215 ANKRD50Q9ULJ7 1429 aa31.44■■■□□ 2.62
SCARB1-211ENST00000546215 FER1L4A9Z1Z3 1794 aa31.42■■■□□ 2.62
SCARB1-211ENST00000546215 RNF17Q9BXT8 1623 aaKnown RBP31.41■■■□□ 2.62
SCARB1-211ENST00000546215 PPP6R1Q9UPN7 881 aa31.4■■■□□ 2.62
SCARB1-211ENST00000546215 RIMS1Q86UR5 1692 aaKnown RBP31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms