RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 LRRC9Q6ZRR7 1453 aa27.16■■□□□ 1.94
CD9-211ENST00000546073 MYT1LQ9UL68 1186 aa27.15■■□□□ 1.94
CD9-211ENST00000546073 DENND4BO75064 1496 aaPredicted RBP27.14■■□□□ 1.94
CD9-211ENST00000546073 ADGRL1O94910 1474 aa27.13■■□□□ 1.93
CD9-211ENST00000546073 RAPGEF3O95398 923 aa27.12■■□□□ 1.93
CD9-211ENST00000546073 SCAPERQ9BY12 1400 aa27.11■■□□□ 1.93
CD9-211ENST00000546073 KANK4Q5T7N3 995 aaPredicted RBP27.11■■□□□ 1.93
CD9-211ENST00000546073 SUPT6HQ7KZ85 1726 aaKnown RBP27.1■■□□□ 1.93
CD9-211ENST00000546073 GPATCH8Q9UKJ3 1502 aaKnown RBP27.08■■□□□ 1.93
CD9-211ENST00000546073 NCOA2Q15596 1464 aa27.07■■□□□ 1.92
CD9-211ENST00000546073 COL17A1Q9UMD9 1497 aaPredicted RBP27.07■■□□□ 1.92
CD9-211ENST00000546073 PLEKHH2Q8IVE3 1493 aa27.04■■□□□ 1.92
CD9-211ENST00000546073 PREX2Q70Z35 1606 aa27.04■■□□□ 1.92
CD9-211ENST00000546073 ITSN2Q9NZM3 1697 aa26.99■■□□□ 1.91
CD9-211ENST00000546073 ZNF518AQ6AHZ1 1483 aa26.98■■□□□ 1.91
CD9-211ENST00000546073 RSPH4AQ5TD94 716 aa26.97■■□□□ 1.91
CD9-211ENST00000546073 CDC42BPAQ5VT25 1732 aa26.96■■□□□ 1.91
CD9-211ENST00000546073 HNRNPMP52272 730 aaKnown RBP eCLIP26.96■■□□□ 1.91
CD9-211ENST00000546073 AFAP1Q8N556 730 aa26.96■■□□□ 1.91
CD9-211ENST00000546073 POGZQ7Z3K3 1410 aa26.96■■□□□ 1.91
CD9-211ENST00000546073 CDC42BPBQ9Y5S2 1711 aa26.96■■□□□ 1.91
CD9-211ENST00000546073 KIAA1107Q9UPP5 1409 aa26.94■■□□□ 1.9
CD9-211ENST00000546073 MAGI2Q86UL8 1455 aa26.93■■□□□ 1.9
CD9-211ENST00000546073 ARID4BQ4LE39 1312 aaPredicted RBP26.92■■□□□ 1.9
CD9-211ENST00000546073 MYOM3Q5VTT5 1437 aa26.91■■□□□ 1.9
CD9-211ENST00000546073 MIA2Q96PC5 1412 aa26.9■■□□□ 1.9
CD9-211ENST00000546073 TSPY4P0CV99 314 aa26.9■■□□□ 1.9
CD9-211ENST00000546073 TSPY10P0CW01 314 aa26.9■■□□□ 1.9
CD9-211ENST00000546073 SPAG9O60271 1321 aaKnown RBP26.9■■□□□ 1.9
CD9-211ENST00000546073 ABCC1P33527 1531 aa26.89■■□□□ 1.89
CD9-211ENST00000546073 ZNF644Q9H582 1327 aaPredicted RBP26.88■■□□□ 1.89
CD9-211ENST00000546073 SAMD9LQ8IVG5 1584 aa26.84■■□□□ 1.89
CD9-211ENST00000546073 TRAPPC8Q9Y2L5 1435 aa26.84■■□□□ 1.89
CD9-211ENST00000546073 PPARGC1BQ86YN6 1023 aaKnown RBP26.84■■□□□ 1.89
CD9-211ENST00000546073 ZFYVE16Q7Z3T8 1539 aa26.84■■□□□ 1.89
CD9-211ENST00000546073 SYCP2Q9BX26 1530 aa26.84■■□□□ 1.89
CD9-211ENST00000546073 RICTORQ6R327 1708 aa26.83■■□□□ 1.89
CD9-211ENST00000546073 ZMYM4Q5VZL5 1548 aa26.83■■□□□ 1.89
CD9-211ENST00000546073 CAMSAP2Q08AD1 1489 aa26.81■■□□□ 1.88
CD9-211ENST00000546073 FRMPD1Q5SYB0 1578 aa26.81■■□□□ 1.88
CD9-211ENST00000546073 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
CD9-211ENST00000546073 ARHGEF12Q9NZN5 1544 aa26.8■■□□□ 1.88
CD9-211ENST00000546073 FAM50AQ14320 339 aaKnown RBP26.79■■□□□ 1.88
CD9-211ENST00000546073 MLH3Q9UHC1 1453 aa26.79■■□□□ 1.88
CD9-211ENST00000546073 ATP10AO60312 1499 aa26.77■■□□□ 1.88
CD9-211ENST00000546073 KDM5CP41229 1560 aa26.75■■□□□ 1.87
CD9-211ENST00000546073 CCDC141Q6ZP82 1450 aa26.75■■□□□ 1.87
CD9-211ENST00000546073 FGD6Q6ZV73 1430 aa26.75■■□□□ 1.87
CD9-211ENST00000546073 HECW2Q9P2P5 1572 aa26.75■■□□□ 1.87
CD9-211ENST00000546073 YEATS2Q9ULM3 1422 aa26.74■■□□□ 1.87
CD9-211ENST00000546073 ARHGEF40Q8TER5 1519 aa26.74■■□□□ 1.87
CD9-211ENST00000546073 C9orf84Q5VXU9 1444 aa26.73■■□□□ 1.87
CD9-211ENST00000546073 MBD5Q9P267 1494 aa26.72■■□□□ 1.87
CD9-211ENST00000546073 ESF1Q9H501 851 aaKnown RBP26.7■■□□□ 1.86
CD9-211ENST00000546073 RTEL1-TNFRSF6BF6WH68 1400 aa26.69■■□□□ 1.86
CD9-211ENST00000546073 PTPN23Q9H3S7 1636 aa26.68■■□□□ 1.86
CD9-211ENST00000546073 MLECQ14165 292 aa26.67■■□□□ 1.86
CD9-211ENST00000546073 ARHGEF5Q12774 1597 aa26.66■■□□□ 1.86
CD9-211ENST00000546073 ATP7AQ04656 1500 aa26.65■■□□□ 1.86
CD9-211ENST00000546073 TCOF1Q13428 1488 aaKnown RBP26.62■■□□□ 1.85
CD9-211ENST00000546073 KDM4FA0A1W2PPD8 638 aa26.6■■□□□ 1.85
CD9-211ENST00000546073 DIP2CQ9Y2E4 1556 aa26.58■■□□□ 1.85
CD9-211ENST00000546073 A2MP01023 1474 aa26.58■■□□□ 1.85
CD9-211ENST00000546073 DAPK1P53355 1430 aa26.56■■□□□ 1.84
CD9-211ENST00000546073 KIDINS220Q9ULH0 1771 aa26.56■■□□□ 1.84
CD9-211ENST00000546073 CHIC2Q9UKJ5 165 aa26.56■■□□□ 1.84
CD9-211ENST00000546073 ANKRD30AQ9BXX3 1397 aa26.56■■□□□ 1.84
CD9-211ENST00000546073 INO80Q9ULG1 1556 aaPredicted RBP26.55■■□□□ 1.84
CD9-211ENST00000546073 ITGAEP38570 1179 aa26.55■■□□□ 1.84
CD9-211ENST00000546073 DHX29Q7Z478 1369 aaKnown RBP26.55■■□□□ 1.84
CD9-211ENST00000546073 ABCA6Q8N139 1617 aa26.54■■□□□ 1.84
CD9-211ENST00000546073 ABCC5O15440 1437 aa26.54■■□□□ 1.84
CD9-211ENST00000546073 REREQ9P2R6 1566 aa26.54■■□□□ 1.84
CD9-211ENST00000546073 RRP7BPQ9NSQ0 103 aa26.53■■□□□ 1.84
CD9-211ENST00000546073 GGT6Q6P531 493 aa26.52■■□□□ 1.84
CD9-211ENST00000546073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.52■■□□□ 1.84
CD9-211ENST00000546073 SHANK2Q9UPX8 1470 aa26.52■■□□□ 1.84
CD9-211ENST00000546073 AGLP35573 1532 aa26.5■■□□□ 1.83
CD9-211ENST00000546073 KIF3BO15066 747 aa26.5■■□□□ 1.83
CD9-211ENST00000546073 PPP6R1Q9UPN7 881 aa26.49■■□□□ 1.83
CD9-211ENST00000546073 MAST1Q9Y2H9 1570 aa26.49■■□□□ 1.83
CD9-211ENST00000546073 ADGBQ8N7X0 1667 aa26.48■■□□□ 1.83
CD9-211ENST00000546073 DNMT1P26358 1616 aaKnown RBP26.48■■□□□ 1.83
CD9-211ENST00000546073 KIF15Q9NS87 1388 aa26.46■■□□□ 1.83
CD9-211ENST00000546073 BCORL1Q5H9F3 1711 aa26.45■■□□□ 1.83
CD9-211ENST00000546073 PLPPR3Q6T4P5 718 aa26.45■■□□□ 1.82
CD9-211ENST00000546073 RRBP1Q9P2E9 1410 aaKnown RBP26.42■■□□□ 1.82
CD9-211ENST00000546073 DUOX2Q9NRD8 1548 aa26.41■■□□□ 1.82
CD9-211ENST00000546073 CNTLNQ9NXG0 1405 aa26.4■■□□□ 1.82
CD9-211ENST00000546073 PLXNC1O60486 1568 aa26.38■■□□□ 1.81
CD9-211ENST00000546073 NCOA1Q15788 1441 aa26.38■■□□□ 1.81
CD9-211ENST00000546073 WASHC2CQ9Y4E1 1318 aa26.38■■□□□ 1.81
CD9-211ENST00000546073 ADAMTSL3P82987 1691 aa26.38■■□□□ 1.81
CD9-211ENST00000546073 CROCC2H7BZ55 1655 aa26.37■■□□□ 1.81
CD9-211ENST00000546073 PTPRMP28827 1452 aa26.36■■□□□ 1.81
CD9-211ENST00000546073 ERBINQ96RT1 1412 aa26.35■■□□□ 1.81
CD9-211ENST00000546073 ROCK1Q13464 1354 aa26.34■■□□□ 1.81
CD9-211ENST00000546073 KANK1Q14678 1352 aa26.34■■□□□ 1.81
CD9-211ENST00000546073 MADDQ8WXG6 1647 aa26.34■■□□□ 1.81
CD9-211ENST00000546073 ADGRL2O95490 1459 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms