RNA–Protein interactions for RNA: ENST00000545964.1

MDM1-215, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-215ENST00000545964 BOLA1Q9Y3E2 137 aa7.73□□□□□ -1.17
MDM1-215ENST00000545964 PDAP1Q13442 181 aaKnown RBP7.71□□□□□ -1.18
MDM1-215ENST00000545964 HOXB3P14651 431 aaPredicted RBP7.7□□□□□ -1.18
MDM1-215ENST00000545964 ZNF687Q8N1G0 1237 aa7.7□□□□□ -1.18
MDM1-215ENST00000545964 NESP48681 1621 aa7.7□□□□□ -1.18
MDM1-215ENST00000545964 CUX2O14529 1486 aa7.69□□□□□ -1.18
MDM1-215ENST00000545964 SMARCA2P51531 1590 aa7.67□□□□□ -1.18
MDM1-215ENST00000545964 BAZ1BQ9UIG0 1483 aaKnown RBP7.67□□□□□ -1.18
MDM1-215ENST00000545964 SMARCA4P51532 1647 aa7.67□□□□□ -1.18
MDM1-215ENST00000545964 VARS2Q5ST30 1063 aaKnown RBP7.66□□□□□ -1.18
MDM1-215ENST00000545964 KLHL34Q8N239 644 aa7.66□□□□□ -1.18
MDM1-215ENST00000545964 BAZ1AQ9NRL2 1556 aaPredicted RBP7.63□□□□□ -1.19
MDM1-215ENST00000545964 HMGXB3Q12766 1538 aa7.63□□□□□ -1.19
MDM1-215ENST00000545964 FKBP8Q14318 412 aa7.62□□□□□ -1.19
MDM1-215ENST00000545964 CABP2Q9NPB3 220 aa7.61□□□□□ -1.19
MDM1-215ENST00000545964 MROH2BQ7Z745 1585 aa7.61□□□□□ -1.19
MDM1-215ENST00000545964 TRIM41Q8WV44 630 aa7.6□□□□□ -1.19
MDM1-215ENST00000545964 PDS5BQ9NTI5 1447 aa7.6□□□□□ -1.19
MDM1-215ENST00000545964 DPY19L2Q6NUT2 758 aa7.59□□□□□ -1.19
MDM1-215ENST00000545964 CADPSQ9ULU8 1353 aa7.58□□□□□ -1.2
MDM1-215ENST00000545964 PEG3Q9GZU2 1588 aa7.55□□□□□ -1.2
MDM1-215ENST00000545964 LAMC3Q9Y6N6 1575 aa7.55□□□□□ -1.2
MDM1-215ENST00000545964 PBX2P40425 430 aa7.55□□□□□ -1.2
MDM1-215ENST00000545964 ANKRD13DQ6ZTN6 518 aa7.55□□□□□ -1.2
MDM1-215ENST00000545964 HCSTQ9UBK5 93 aa7.55□□□□□ -1.2
MDM1-215ENST00000545964 GPR153Q6NV75 609 aa7.54□□□□□ -1.2
MDM1-215ENST00000545964 PLA2G2EQ9NZK7 142 aa7.53□□□□□ -1.2
MDM1-215ENST00000545964 LSM11P83369 360 aaKnown RBP eCLIP7.52□□□□□ -1.21
MDM1-215ENST00000545964 THOC2Q8NI27 1593 aaKnown RBP7.51□□□□□ -1.21
MDM1-215ENST00000545964 VASPP50552 380 aaPredicted RBP7.51□□□□□ -1.21
MDM1-215ENST00000545964 WIZO95785 1651 aa7.51□□□□□ -1.21
MDM1-215ENST00000545964 ZNF316A6NFI3 1004 aaPredicted RBP7.5□□□□□ -1.21
MDM1-215ENST00000545964 SOX12O15370 315 aa7.5□□□□□ -1.21
MDM1-215ENST00000545964 KIF21AQ7Z4S6 1674 aa7.5□□□□□ -1.21
MDM1-215ENST00000545964 MICALL2Q8IY33 904 aa7.49□□□□□ -1.21
MDM1-215ENST00000545964 MRC2Q9UBG0 1479 aa7.49□□□□□ -1.21
MDM1-215ENST00000545964 CIZ1Q9ULV3 898 aaPredicted RBP7.47□□□□□ -1.21
MDM1-215ENST00000545964 RSF1Q96T23 1441 aaPredicted RBP7.46□□□□□ -1.21
MDM1-215ENST00000545964 RGS20O76081 388 aa7.46□□□□□ -1.22
MDM1-215ENST00000545964 SPOCK2Q92563 424 aa7.46□□□□□ -1.22
MDM1-215ENST00000545964 FANCD2Q9BXW9 1451 aa7.46□□□□□ -1.22
MDM1-215ENST00000545964 CEP164Q9UPV0 1460 aa7.45□□□□□ -1.22
MDM1-215ENST00000545964 EFCAB3Q8N7B9 438 aa7.45□□□□□ -1.22
MDM1-215ENST00000545964 ARSIQ5FYB1 569 aa7.44□□□□□ -1.22
MDM1-215ENST00000545964 CFTRP13569 1480 aa7.43□□□□□ -1.22
MDM1-215ENST00000545964 WDR62O43379 1518 aa7.42□□□□□ -1.22
MDM1-215ENST00000545964 PSDA5PKW4 1024 aaPredicted RBP7.42□□□□□ -1.22
MDM1-215ENST00000545964 TMEM92Q6UXU6 159 aa7.4□□□□□ -1.22
MDM1-215ENST00000545964 URB2Q14146 1524 aaKnown RBP7.38□□□□□ -1.23
MDM1-215ENST00000545964 TOP2AP11388 1531 aaKnown RBP7.37□□□□□ -1.23
MDM1-215ENST00000545964 CCDC88BA6NC98 1476 aa7.37□□□□□ -1.23
MDM1-215ENST00000545964 TK2O00142 265 aa7.37□□□□□ -1.23
MDM1-215ENST00000545964 STAC3Q96MF2 364 aa7.37□□□□□ -1.23
MDM1-215ENST00000545964 TAOK2Q9UL54 1235 aa7.36□□□□□ -1.23
MDM1-215ENST00000545964 ARHGAP33O14559 1287 aa7.35□□□□□ -1.23
MDM1-215ENST00000545964 CYB5RLQ6IPT4 315 aa7.35□□□□□ -1.23
MDM1-215ENST00000545964 SLC34A2O95436 690 aa7.34□□□□□ -1.23
MDM1-215ENST00000545964 NLRP6P59044 892 aa7.34□□□□□ -1.23
MDM1-215ENST00000545964 ADGRD1Q6QNK2 874 aa7.34□□□□□ -1.23
MDM1-215ENST00000545964 ZNF608Q9ULD9 1512 aaPredicted RBP7.33□□□□□ -1.24
MDM1-215ENST00000545964 IFFO2Q5TF58 517 aa7.33□□□□□ -1.24
MDM1-215ENST00000545964 IRX2Q9BZI1 471 aaPredicted RBP7.33□□□□□ -1.24
MDM1-215ENST00000545964 VGFO15240 615 aaPredicted RBP7.31□□□□□ -1.24
MDM1-215ENST00000545964 KCNH8Q96L42 1107 aa7.31□□□□□ -1.24
MDM1-215ENST00000545964 AQRO60306 1485 aaKnown RBP eCLIP7.3□□□□□ -1.24
MDM1-215ENST00000545964 IFT140Q96RY7 1462 aa7.3□□□□□ -1.24
MDM1-215ENST00000545964 NUDT7P0C024 238 aa7.3□□□□□ -1.24
MDM1-215ENST00000545964 LHX6Q9UPM6 363 aa7.3□□□□□ -1.24
MDM1-215ENST00000545964 TOPBP1Q92547 1522 aa7.29□□□□□ -1.24
MDM1-215ENST00000545964 RIOK3O14730 519 aaKnown RBP7.29□□□□□ -1.24
MDM1-215ENST00000545964 KHSRPQ92945 711 aaKnown RBP eCLIP7.28□□□□□ -1.245e-6■■■□□ 19
MDM1-215ENST00000545964 MS4A4AQ96JQ5 239 aa7.28□□□□□ -1.24
MDM1-215ENST00000545964 PHF8Q9UPP1 1060 aa7.28□□□□□ -1.24
MDM1-215ENST00000545964 PCDHGA4Q9Y5G9 962 aa7.28□□□□□ -1.24
MDM1-215ENST00000545964 ABCC8Q09428 1581 aa7.28□□□□□ -1.24
MDM1-215ENST00000545964 AXIN2Q9Y2T1 843 aa7.27□□□□□ -1.25
MDM1-215ENST00000545964 TDRD9Q8NDG6 1382 aaKnown RBP7.27□□□□□ -1.25
MDM1-215ENST00000545964 SUPT5HO00267 1087 aaKnown RBP7.26□□□□□ -1.25
MDM1-215ENST00000545964 IFNLR1Q8IU57 520 aaPredicted RBP7.26□□□□□ -1.25
MDM1-215ENST00000545964 CHMP7Q8WUX9 453 aaPredicted RBP7.26□□□□□ -1.25
MDM1-215ENST00000545964 SOGA1O94964 1423 aa7.26□□□□□ -1.25
MDM1-215ENST00000545964 RIMBP3CA6NJZ7 1639 aa7.25□□□□□ -1.25
MDM1-215ENST00000545964 RIMBP3BA6NNM3 1639 aa7.25□□□□□ -1.25
MDM1-215ENST00000545964 RIMBP3Q9UFD9 1639 aa7.25□□□□□ -1.25
MDM1-215ENST00000545964 RAD54L2Q9Y4B4 1467 aa7.24□□□□□ -1.25
MDM1-215ENST00000545964 ARHGEF11O15085 1522 aa7.24□□□□□ -1.25
MDM1-215ENST00000545964 KIF3CO14782 793 aa7.24□□□□□ -1.25
MDM1-215ENST00000545964 HRO43593 1189 aa7.24□□□□□ -1.25
MDM1-215ENST00000545964 POTEEQ6S8J3 1075 aa7.24□□□□□ -1.25
MDM1-215ENST00000545964 TMC2Q8TDI7 906 aa7.24□□□□□ -1.25
MDM1-215ENST00000545964 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.23□□□□□ -1.25
MDM1-215ENST00000545964 KCTD12Q96CX2 325 aaKnown RBP7.23□□□□□ -1.25
MDM1-215ENST00000545964 ZFP91Q96JP5 570 aaPredicted RBP7.23□□□□□ -1.25
MDM1-215ENST00000545964 DNMBPQ6XZF7 1577 aa7.22□□□□□ -1.25
MDM1-215ENST00000545964 C2orf72A6NCS6 295 aa7.22□□□□□ -1.25
MDM1-215ENST00000545964 PPP4R3BQ5MIZ7 849 aa7.22□□□□□ -1.25
MDM1-215ENST00000545964 POLA1P09884 1462 aaPredicted RBP7.21□□□□□ -1.26
MDM1-215ENST00000545964 EIF4G3O43432 1585 aaKnown RBP7.2□□□□□ -1.26
MDM1-215ENST00000545964 TBC1D12O60347 775 aa7.2□□□□□ -1.26
MDM1-215ENST00000545964 PRDM2Q13029 1718 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms