RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 EHBP1L1Q8N3D4 1523 aa8.34□□□□□ -1.08
NPIPB3-214ENST00000545358 FBXO3Q9UK99 471 aa8.33□□□□□ -1.08
NPIPB3-214ENST00000545358 TTBK1Q5TCY1 1321 aaPredicted RBP8.32□□□□□ -1.08
NPIPB3-214ENST00000545358 P3H3Q8IVL6 736 aa8.32□□□□□ -1.08
NPIPB3-214ENST00000545358 CARMIL2Q6F5E8 1435 aa8.31□□□□□ -1.08
NPIPB3-214ENST00000545358 KANK4Q5T7N3 995 aaPredicted RBP8.31□□□□□ -1.08
NPIPB3-214ENST00000545358 RAPGEF6Q8TEU7 1601 aa8.31□□□□□ -1.08
NPIPB3-214ENST00000545358 SHROOM2Q13796 1616 aa8.3□□□□□ -1.08
NPIPB3-214ENST00000545358 PLEKHG5O94827 1062 aa8.3□□□□□ -1.08
NPIPB3-214ENST00000545358 SUPT6HQ7KZ85 1726 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-214ENST00000545358 CHADLQ6NUI6 762 aa8.29□□□□□ -1.08
NPIPB3-214ENST00000545358 CCNB3Q8WWL7 1395 aa8.29□□□□□ -1.08
NPIPB3-214ENST00000545358 EPRSP07814 1512 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-214ENST00000545358 ZEB1P37275 1124 aaPredicted RBP8.28□□□□□ -1.08
NPIPB3-214ENST00000545358 MTUS2Q5JR59 1369 aa8.27□□□□□ -1.09
NPIPB3-214ENST00000545358 CREBZFQ9NS37 354 aa8.27□□□□□ -1.09
NPIPB3-214ENST00000545358 FARP1Q9Y4F1 1045 aaPredicted RBP8.27□□□□□ -1.09
NPIPB3-214ENST00000545358 ARHGEF11O15085 1522 aa8.27□□□□□ -1.09
NPIPB3-214ENST00000545358 CLASP1Q7Z460 1538 aa8.27□□□□□ -1.09
NPIPB3-214ENST00000545358 PHLDB1Q86UU1 1377 aa8.26□□□□□ -1.09
NPIPB3-214ENST00000545358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.26□□□□□ -1.09
NPIPB3-214ENST00000545358 HAX1O00165 279 aa8.26□□□□□ -1.09
NPIPB3-214ENST00000545358 ABCA8O94911 1581 aa8.26□□□□□ -1.09
NPIPB3-214ENST00000545358 NUP153P49790 1475 aaKnown RBP8.26□□□□□ -1.09
NPIPB3-214ENST00000545358 CDK13Q14004 1512 aaKnown RBP8.25□□□□□ -1.09
NPIPB3-214ENST00000545358 MAGI3Q5TCQ9 1506 aa8.25□□□□□ -1.09
NPIPB3-214ENST00000545358 JPH4Q96JJ6 628 aa8.25□□□□□ -1.09
NPIPB3-214ENST00000545358 NCOA2Q15596 1464 aa8.25□□□□□ -1.09
NPIPB3-214ENST00000545358 NPM1P06748 294 aaKnown RBP eCLIP8.24□□□□□ -1.09
NPIPB3-214ENST00000545358 ATP1B4Q9UN42 357 aaPredicted RBP8.24□□□□□ -1.09
NPIPB3-214ENST00000545358 FGD6Q6ZV73 1430 aa8.23□□□□□ -1.09
NPIPB3-214ENST00000545358 ADCY10Q96PN6 1610 aa8.23□□□□□ -1.09
NPIPB3-214ENST00000545358 ZBTB47Q9UFB7 747 aaPredicted RBP8.23□□□□□ -1.09
NPIPB3-214ENST00000545358 MYOM3Q5VTT5 1437 aa8.22□□□□□ -1.09
NPIPB3-214ENST00000545358 PRG4Q92954 1404 aaPredicted RBP8.22□□□□□ -1.09
NPIPB3-214ENST00000545358 MIER1Q8N108 512 aa8.22□□□□□ -1.09
NPIPB3-214ENST00000545358 PLB1Q6P1J6 1458 aa8.21□□□□□ -1.09
NPIPB3-214ENST00000545358 TCOF1Q13428 1488 aaKnown RBP8.2□□□□□ -1.1
NPIPB3-214ENST00000545358 C19orf67A6NJJ6 358 aa8.2□□□□□ -1.1
NPIPB3-214ENST00000545358 PLCD3Q8N3E9 789 aa8.2□□□□□ -1.1
NPIPB3-214ENST00000545358 PTPN23Q9H3S7 1636 aa8.2□□□□□ -1.1
NPIPB3-214ENST00000545358 ITSN2Q9NZM3 1697 aa8.2□□□□□ -1.1
NPIPB3-214ENST00000545358 TROQ12816 1431 aaPredicted RBP8.2□□□□□ -1.1
NPIPB3-214ENST00000545358 MIA2Q96PC5 1412 aa8.19□□□□□ -1.1
NPIPB3-214ENST00000545358 CCER1Q8TC90 406 aaPredicted RBP8.18□□□□□ -1.1
NPIPB3-214ENST00000545358 CDK11AQ9UQ88 783 aaPredicted RBP8.18□□□□□ -1.1
NPIPB3-214ENST00000545358 PTPRGP23470 1445 aa8.18□□□□□ -1.1
NPIPB3-214ENST00000545358 ABCC2Q92887 1545 aa8.18□□□□□ -1.1
NPIPB3-214ENST00000545358 KIF14Q15058 1648 aa8.18□□□□□ -1.1
NPIPB3-214ENST00000545358 MNX1P50219 401 aaPredicted RBP8.17□□□□□ -1.1
NPIPB3-214ENST00000545358 SP7Q8TDD2 431 aaPredicted RBP8.17□□□□□ -1.1
NPIPB3-214ENST00000545358 PAK3O75914 559 aaPredicted RBP8.16□□□□□ -1.1
NPIPB3-214ENST00000545358 ERCC6L2Q5T890 1561 aa8.16□□□□□ -1.1
NPIPB3-214ENST00000545358 UACAQ9BZF9 1416 aa8.16□□□□□ -1.1
NPIPB3-214ENST00000545358 UHRF1BP1LA0JNW5 1464 aa8.15□□□□□ -1.1
NPIPB3-214ENST00000545358 ATP10BO94823 1461 aa8.15□□□□□ -1.1
NPIPB3-214ENST00000545358 AKNAQ7Z591 1439 aa8.15□□□□□ -1.1
NPIPB3-214ENST00000545358 CLSPNQ9HAW4 1339 aa8.15□□□□□ -1.1
NPIPB3-214ENST00000545358 CD44P16070 742 aaKnown RBP8.15□□□□□ -1.1
NPIPB3-214ENST00000545358 CLCN6P51797 869 aa8.15□□□□□ -1.1
NPIPB3-214ENST00000545358 SETD5Q9C0A6 1442 aa8.14□□□□□ -1.11
NPIPB3-214ENST00000545358 VASPP50552 380 aaPredicted RBP8.14□□□□□ -1.11
NPIPB3-214ENST00000545358 FAM50AQ14320 339 aaKnown RBP8.14□□□□□ -1.11
NPIPB3-214ENST00000545358 GCC2Q8IWJ2 1684 aa8.14□□□□□ -1.11
NPIPB3-214ENST00000545358 DNMT1P26358 1616 aaKnown RBP8.13□□□□□ -1.11
NPIPB3-214ENST00000545358 ABCC10Q5T3U5 1492 aa8.13□□□□□ -1.11
NPIPB3-214ENST00000545358 HFM1A2PYH4 1435 aa8.12□□□□□ -1.11
NPIPB3-214ENST00000545358 DHX57Q6P158 1386 aaKnown RBP8.12□□□□□ -1.11
NPIPB3-214ENST00000545358 CDC42BPAQ5VT25 1732 aa8.12□□□□□ -1.11
NPIPB3-214ENST00000545358 CROCC2H7BZ55 1655 aa8.11□□□□□ -1.11
NPIPB3-214ENST00000545358 RAB3GAP2Q9H2M9 1393 aa8.11□□□□□ -1.11
NPIPB3-214ENST00000545358 ZCCHC11Q5TAX3 1644 aaKnown RBP8.11□□□□□ -1.11
NPIPB3-214ENST00000545358 PREX2Q70Z35 1606 aa8.11□□□□□ -1.11
NPIPB3-214ENST00000545358 KDM5BQ9UGL1 1544 aa8.1□□□□□ -1.11
NPIPB3-214ENST00000545358 GPATCH8Q9UKJ3 1502 aaKnown RBP8.1□□□□□ -1.11
NPIPB3-214ENST00000545358 CAMSAP2Q08AD1 1489 aa8.1□□□□□ -1.11
NPIPB3-214ENST00000545358 ADGBQ8N7X0 1667 aa8.09□□□□□ -1.11
NPIPB3-214ENST00000545358 ARID3CA6NKF2 412 aa8.09□□□□□ -1.11
NPIPB3-214ENST00000545358 ITGAEP38570 1179 aa8.09□□□□□ -1.11
NPIPB3-214ENST00000545358 DAPK1P53355 1430 aa8.09□□□□□ -1.11
NPIPB3-214ENST00000545358 PTPRKQ15262 1439 aa8.09□□□□□ -1.11
NPIPB3-214ENST00000545358 PLEKHD1A6NEE1 506 aa8.08□□□□□ -1.12
NPIPB3-214ENST00000545358 EVX2Q03828 476 aa8.08□□□□□ -1.12
NPIPB3-214ENST00000545358 ROCK1Q13464 1354 aa8.08□□□□□ -1.12
NPIPB3-214ENST00000545358 SHANK2Q9UPX8 1470 aa8.07□□□□□ -1.12
NPIPB3-214ENST00000545358 NAIPQ13075 1403 aa8.07□□□□□ -1.12
NPIPB3-214ENST00000545358 ZNF579Q8NAF0 562 aaKnown RBP8.07□□□□□ -1.12
NPIPB3-214ENST00000545358 ZRANB1Q9UGI0 708 aa8.07□□□□□ -1.12
NPIPB3-214ENST00000545358 MAPKBP1O60336 1514 aa8.07□□□□□ -1.12
NPIPB3-214ENST00000545358 ADGRL2O95490 1459 aa8.06□□□□□ -1.12
NPIPB3-214ENST00000545358 MYO5CQ9NQX4 1742 aa8.06□□□□□ -1.12
NPIPB3-214ENST00000545358 ARHGEF5Q12774 1597 aa8.06□□□□□ -1.12
NPIPB3-214ENST00000545358 TTC37Q6PGP7 1564 aa8.06□□□□□ -1.12
NPIPB3-214ENST00000545358 ACIN1Q9UKV3 1341 aaKnown RBP8.05□□□□□ -1.12
NPIPB3-214ENST00000545358 ABCC5O15440 1437 aa8.05□□□□□ -1.12
NPIPB3-214ENST00000545358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.05□□□□□ -1.12
NPIPB3-214ENST00000545358 CDC42BPBQ9Y5S2 1711 aa8.05□□□□□ -1.12
NPIPB3-214ENST00000545358 ARAP3Q8WWN8 1544 aa8.04□□□□□ -1.12
NPIPB3-214ENST00000545358 CFDP1Q9UEE9 299 aaPredicted RBP8.04□□□□□ -1.12
NPIPB3-214ENST00000545358 SAMD9LQ8IVG5 1584 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms