RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 ATP10BO94823 1461 aa11.95□□□□□ -0.5
CPSF7-224ENST00000544990 KCNH8Q96L42 1107 aa11.95□□□□□ -0.5
CPSF7-224ENST00000544990 FMN1Q68DA7 1419 aa11.94□□□□□ -0.5
CPSF7-224ENST00000544990 ARHGAP35Q9NRY4 1499 aa11.93□□□□□ -0.5
CPSF7-224ENST00000544990 MAP3K4Q9Y6R4 1608 aa11.93□□□□□ -0.5
CPSF7-224ENST00000544990 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-224ENST00000544990 NUP153P49790 1475 aaKnown RBP11.91□□□□□ -0.5
CPSF7-224ENST00000544990 CFAP43Q8NDM7 1665 aa11.91□□□□□ -0.5
CPSF7-224ENST00000544990 TEX14Q8IWB6 1497 aa11.9□□□□□ -0.5
CPSF7-224ENST00000544990 KDM6BO15054 1643 aa11.9□□□□□ -0.5
CPSF7-224ENST00000544990 PLEKHD1A6NEE1 506 aa11.9□□□□□ -0.5
CPSF7-224ENST00000544990 ATP1B4Q9UN42 357 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-224ENST00000544990 PPRC1Q5VV67 1664 aaKnown RBP11.9□□□□□ -0.5
CPSF7-224ENST00000544990 CD109Q6YHK3 1445 aa11.89□□□□□ -0.51
CPSF7-224ENST00000544990 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
CPSF7-224ENST00000544990 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
CPSF7-224ENST00000544990 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
CPSF7-224ENST00000544990 HECW1Q76N89 1606 aa11.87□□□□□ -0.51
CPSF7-224ENST00000544990 VASPP50552 380 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-224ENST00000544990 CLIP1P30622 1438 aa11.86□□□□□ -0.51
CPSF7-224ENST00000544990 MAGI3Q5TCQ9 1506 aa11.86□□□□□ -0.51
CPSF7-224ENST00000544990 CDK11AQ9UQ88 783 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-224ENST00000544990 ABCA9Q8IUA7 1624 aa11.84□□□□□ -0.51
CPSF7-224ENST00000544990 CDK13Q14004 1512 aaKnown RBP11.83□□□□□ -0.52
CPSF7-224ENST00000544990 CASKIN1Q8WXD9 1431 aa11.81□□□□□ -0.52
CPSF7-224ENST00000544990 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
CPSF7-224ENST00000544990 CCDC18Q5T9S5 1454 aa11.79□□□□□ -0.52
CPSF7-224ENST00000544990 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
CPSF7-224ENST00000544990 PCF11O94913 1555 aaKnown RBP11.79□□□□□ -0.52
CPSF7-224ENST00000544990 COL17A1Q9UMD9 1497 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-224ENST00000544990 LRRIQ1Q96JM4 1722 aa11.78□□□□□ -0.52
CPSF7-224ENST00000544990 CEP162Q5TB80 1403 aa11.77□□□□□ -0.52
CPSF7-224ENST00000544990 FYCO1Q9BQS8 1478 aa11.77□□□□□ -0.52
CPSF7-224ENST00000544990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.77□□□□□ -0.52
CPSF7-224ENST00000544990 NEO1Q92859 1461 aa11.76□□□□□ -0.53
CPSF7-224ENST00000544990 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
CPSF7-224ENST00000544990 TROQ12816 1431 aaPredicted RBP11.76□□□□□ -0.53
CPSF7-224ENST00000544990 ARAP3Q8WWN8 1544 aa11.76□□□□□ -0.53
CPSF7-224ENST00000544990 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
CPSF7-224ENST00000544990 CFAP74Q9C0B2 1584 aa11.75□□□□□ -0.53
CPSF7-224ENST00000544990 KIF14Q15058 1648 aa11.75□□□□□ -0.53
CPSF7-224ENST00000544990 TTC37Q6PGP7 1564 aa11.74□□□□□ -0.53
CPSF7-224ENST00000544990 MYO5CQ9NQX4 1742 aa11.72□□□□□ -0.53
CPSF7-224ENST00000544990 FANCAO15360 1455 aa11.72□□□□□ -0.53
CPSF7-224ENST00000544990 PLCH2O75038 1416 aa11.72□□□□□ -0.53
CPSF7-224ENST00000544990 AKNAQ7Z591 1439 aa11.71□□□□□ -0.53
CPSF7-224ENST00000544990 RAPGEF3O95398 923 aa11.7□□□□□ -0.54
CPSF7-224ENST00000544990 EFCAB2Q5VUJ9 269 aa11.7□□□□□ -0.54
CPSF7-224ENST00000544990 DENND4BO75064 1496 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-224ENST00000544990 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-224ENST00000544990 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
CPSF7-224ENST00000544990 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
CPSF7-224ENST00000544990 ARHGAP5Q13017 1502 aa11.66□□□□□ -0.54
CPSF7-224ENST00000544990 ADGRL1O94910 1474 aa11.66□□□□□ -0.54
CPSF7-224ENST00000544990 SLC24A1O60721 1099 aa11.65□□□□□ -0.54
CPSF7-224ENST00000544990 PLCD3Q8N3E9 789 aa11.65□□□□□ -0.54
CPSF7-224ENST00000544990 VPS8Q8N3P4 1428 aa11.65□□□□□ -0.54
CPSF7-224ENST00000544990 SCAPERQ9BY12 1400 aa11.65□□□□□ -0.54
CPSF7-224ENST00000544990 RICTORQ6R327 1708 aa11.65□□□□□ -0.54
CPSF7-224ENST00000544990 CDC42BPBQ9Y5S2 1711 aa11.65□□□□□ -0.54
CPSF7-224ENST00000544990 FRMPD1Q5SYB0 1578 aa11.64□□□□□ -0.55
CPSF7-224ENST00000544990 KDM4FA0A1W2PPD8 638 aa11.64□□□□□ -0.55
CPSF7-224ENST00000544990 PREX2Q70Z35 1606 aa11.64□□□□□ -0.55
CPSF7-224ENST00000544990 CDC42BPAQ5VT25 1732 aa11.63□□□□□ -0.55
CPSF7-224ENST00000544990 EHBP1L1Q8N3D4 1523 aa11.62□□□□□ -0.55
CPSF7-224ENST00000544990 PLEKHG5O94827 1062 aa11.62□□□□□ -0.55
CPSF7-224ENST00000544990 MIER1Q8N108 512 aa11.62□□□□□ -0.55
CPSF7-224ENST00000544990 CCNB3Q8WWL7 1395 aa11.61□□□□□ -0.55
CPSF7-224ENST00000544990 MAGI2Q86UL8 1455 aa11.61□□□□□ -0.55
CPSF7-224ENST00000544990 POGZQ7Z3K3 1410 aa11.6□□□□□ -0.55
CPSF7-224ENST00000544990 ZMYM4Q5VZL5 1548 aa11.6□□□□□ -0.55
CPSF7-224ENST00000544990 ZNF777Q9ULD5 760 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-224ENST00000544990 GPATCH8Q9UKJ3 1502 aaKnown RBP11.6□□□□□ -0.55
CPSF7-224ENST00000544990 TIAM1Q13009 1591 aa11.59□□□□□ -0.55
CPSF7-224ENST00000544990 ZNF518AQ6AHZ1 1483 aa11.59□□□□□ -0.55
CPSF7-224ENST00000544990 RBM42Q9BTD8 480 aaKnown RBP11.59□□□□□ -0.55
CPSF7-224ENST00000544990 CFDP1Q9UEE9 299 aaPredicted RBP11.59□□□□□ -0.55
CPSF7-224ENST00000544990 MYT1LQ9UL68 1186 aa11.59□□□□□ -0.55
CPSF7-224ENST00000544990 ARID4BQ4LE39 1312 aaPredicted RBP11.59□□□□□ -0.55
CPSF7-224ENST00000544990 SUPT6HQ7KZ85 1726 aaKnown RBP11.58□□□□□ -0.56
CPSF7-224ENST00000544990 AFAP1Q8N556 730 aa11.58□□□□□ -0.56
CPSF7-224ENST00000544990 SPOCK2Q92563 424 aa11.58□□□□□ -0.56
CPSF7-224ENST00000544990 ZFYVE16Q7Z3T8 1539 aa11.58□□□□□ -0.56
CPSF7-224ENST00000544990 ARHGEF40Q8TER5 1519 aa11.58□□□□□ -0.56
CPSF7-224ENST00000544990 MAP3K1Q13233 1512 aa11.57□□□□□ -0.56
CPSF7-224ENST00000544990 ITSN2Q9NZM3 1697 aa11.57□□□□□ -0.56
CPSF7-224ENST00000544990 ABCC1P33527 1531 aa11.56□□□□□ -0.56
CPSF7-224ENST00000544990 PLEKHH2Q8IVE3 1493 aa11.56□□□□□ -0.56
CPSF7-224ENST00000544990 KDM5CP41229 1560 aa11.55□□□□□ -0.56
CPSF7-224ENST00000544990 YEATS2Q9ULM3 1422 aa11.55□□□□□ -0.56
CPSF7-224ENST00000544990 LRRC9Q6ZRR7 1453 aa11.55□□□□□ -0.56
CPSF7-224ENST00000544990 SAMD9LQ8IVG5 1584 aa11.54□□□□□ -0.56
CPSF7-224ENST00000544990 HNRNPMP52272 730 aaKnown RBP eCLIP11.54□□□□□ -0.56
CPSF7-224ENST00000544990 ATP10AO60312 1499 aa11.54□□□□□ -0.56
CPSF7-224ENST00000544990 NCOA2Q15596 1464 aa11.54□□□□□ -0.56
CPSF7-224ENST00000544990 ARHGEF12Q9NZN5 1544 aa11.54□□□□□ -0.56
CPSF7-224ENST00000544990 HECW2Q9P2P5 1572 aa11.54□□□□□ -0.56
CPSF7-224ENST00000544990 KIAA1107Q9UPP5 1409 aa11.53□□□□□ -0.56
CPSF7-224ENST00000544990 TRAPPC8Q9Y2L5 1435 aa11.53□□□□□ -0.56
CPSF7-224ENST00000544990 MLH3Q9UHC1 1453 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms