RNA–Protein interactions for RNA: ENST00000544802.5

GTF2IP4-202, Transcript of general transcription factor IIi pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP4, Length 3,609 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP4-202ENST00000544802 CFDP1Q9UEE9 299 aaPredicted RBP23.93■■□□□ 1.42
GTF2IP4-202ENST00000544802 CCDC7Q96M83 1385 aa23.93■■□□□ 1.42
GTF2IP4-202ENST00000544802 CRBNQ96SW2 442 aa23.93■■□□□ 1.42
GTF2IP4-202ENST00000544802 EIF4G1Q04637 1599 aaKnown RBP23.93■■□□□ 1.42
GTF2IP4-202ENST00000544802 PRXQ9BXM0 1461 aa23.9■■□□□ 1.42
GTF2IP4-202ENST00000544802 RRP1P56182 461 aaKnown RBP23.9■■□□□ 1.42
GTF2IP4-202ENST00000544802 FMN1Q68DA7 1419 aa23.89■■□□□ 1.42
GTF2IP4-202ENST00000544802 CCDC146Q8IYE0 955 aa23.88■■□□□ 1.41
GTF2IP4-202ENST00000544802 DDRGK1Q96HY6 314 aa23.85■■□□□ 1.41
GTF2IP4-202ENST00000544802 TCERG1O14776 1098 aaKnown RBP23.85■■□□□ 1.41
GTF2IP4-202ENST00000544802 NAP1L5Q96NT1 182 aaPredicted RBP23.83■■□□□ 1.41
GTF2IP4-202ENST00000544802 CNTLNQ9NXG0 1405 aa23.82■■□□□ 1.4
GTF2IP4-202ENST00000544802 CHGAP10645 457 aaKnown RBP23.81■■□□□ 1.4
GTF2IP4-202ENST00000544802 FGD6Q6ZV73 1430 aa23.81■■□□□ 1.4
GTF2IP4-202ENST00000544802 TSPY4P0CV99 314 aa23.8■■□□□ 1.4
GTF2IP4-202ENST00000544802 TSPY10P0CW01 314 aa23.8■■□□□ 1.4
GTF2IP4-202ENST00000544802 NFKBIBQ15653 356 aa23.8■■□□□ 1.4
GTF2IP4-202ENST00000544802 GSE1Q14687 1217 aa23.79■■□□□ 1.4
GTF2IP4-202ENST00000544802 FRAT2O75474 233 aaPredicted RBP23.78■■□□□ 1.4
GTF2IP4-202ENST00000544802 ARID3AQ99856 593 aa23.76■■□□□ 1.39
GTF2IP4-202ENST00000544802 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
GTF2IP4-202ENST00000544802 UACAQ9BZF9 1416 aa23.75■■□□□ 1.39
GTF2IP4-202ENST00000544802 CLUAP1Q96AJ1 413 aa23.74■■□□□ 1.39
GTF2IP4-202ENST00000544802 HSP90AA1P07900 732 aaKnown RBP23.74■■□□□ 1.39
GTF2IP4-202ENST00000544802 USP47Q96K76 1375 aa23.74■■□□□ 1.39
GTF2IP4-202ENST00000544802 ZBTB7CA1YPR0 619 aa23.73■■□□□ 1.39
GTF2IP4-202ENST00000544802 C20orf194Q5TEA3 1177 aa23.73■■□□□ 1.39
GTF2IP4-202ENST00000544802 BCL2L13Q9BXK5 485 aa23.73■■□□□ 1.39
GTF2IP4-202ENST00000544802 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.73■■□□□ 1.39
GTF2IP4-202ENST00000544802 TPRNQ4KMQ1 711 aa23.72■■□□□ 1.39
GTF2IP4-202ENST00000544802 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.39
GTF2IP4-202ENST00000544802 UPF2Q9HAU5 1272 aaKnown RBP23.7■■□□□ 1.38
GTF2IP4-202ENST00000544802 PNISRQ8TF01 805 aaKnown RBP23.7■■□□□ 1.38
GTF2IP4-202ENST00000544802 KNSTRNQ9Y448 316 aa23.7■■□□□ 1.38
GTF2IP4-202ENST00000544802 CFTRP13569 1480 aa23.69■■□□□ 1.38
GTF2IP4-202ENST00000544802 PTPRKQ15262 1439 aa23.69■■□□□ 1.38
GTF2IP4-202ENST00000544802 PEG3Q9GZU2 1588 aa23.68■■□□□ 1.38
GTF2IP4-202ENST00000544802 CUX1P39880 1505 aa23.67■■□□□ 1.38
GTF2IP4-202ENST00000544802 BACH2Q9BYV9 841 aa23.66■■□□□ 1.38
GTF2IP4-202ENST00000544802 NCAPD3P42695 1498 aa23.66■■□□□ 1.38
GTF2IP4-202ENST00000544802 TIAM1Q13009 1591 aa23.66■■□□□ 1.38
GTF2IP4-202ENST00000544802 DNAJC5BQ9UF47 199 aa23.65■■□□□ 1.38
GTF2IP4-202ENST00000544802 RRP7AQ9Y3A4 280 aaKnown RBP23.65■■□□□ 1.38
GTF2IP4-202ENST00000544802 PANK3Q9H999 370 aa23.65■■□□□ 1.38
GTF2IP4-202ENST00000544802 NUP155O75694 1391 aa23.65■■□□□ 1.38
GTF2IP4-202ENST00000544802 FOXD4L1Q9NU39 408 aa23.62■■□□□ 1.37
GTF2IP4-202ENST00000544802 NLRP13Q86W25 1043 aa23.61■■□□□ 1.37
GTF2IP4-202ENST00000544802 ROCK2O75116 1388 aaKnown RBP23.61■■□□□ 1.37
GTF2IP4-202ENST00000544802 FGD5Q6ZNL6 1462 aa23.61■■□□□ 1.37
GTF2IP4-202ENST00000544802 NAIPQ13075 1403 aa23.6■■□□□ 1.37
GTF2IP4-202ENST00000544802 HNRNPMP52272 730 aaKnown RBP eCLIP23.59■■□□□ 1.37
GTF2IP4-202ENST00000544802 KTN1Q86UP2 1357 aaKnown RBP23.59■■□□□ 1.37
GTF2IP4-202ENST00000544802 CC2D2AQ9P2K1 1620 aa23.58■■□□□ 1.37
GTF2IP4-202ENST00000544802 MYBBP1AQ9BQG0 1328 aaKnown RBP23.58■■□□□ 1.37
GTF2IP4-202ENST00000544802 NBPF1Q3BBV0 1214 aa23.58■■□□□ 1.36
GTF2IP4-202ENST00000544802 COG6Q9Y2V7 657 aa23.57■■□□□ 1.36
GTF2IP4-202ENST00000544802 ERICH3Q5RHP9 1530 aa23.56■■□□□ 1.36
GTF2IP4-202ENST00000544802 TOP2BQ02880 1626 aa23.56■■□□□ 1.36
GTF2IP4-202ENST00000544802 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
GTF2IP4-202ENST00000544802 BECN1Q14457 450 aa23.56■■□□□ 1.36
GTF2IP4-202ENST00000544802 ADAMTS8Q9UP79 889 aa23.54■■□□□ 1.36
GTF2IP4-202ENST00000544802 NCLP19338 710 aaKnown RBP23.53■■□□□ 1.36
GTF2IP4-202ENST00000544802 CHMP7Q8WUX9 453 aaPredicted RBP23.53■■□□□ 1.36
GTF2IP4-202ENST00000544802 RALBP1Q15311 655 aa23.52■■□□□ 1.36
GTF2IP4-202ENST00000544802 MYOM3Q5VTT5 1437 aa23.52■■□□□ 1.36
GTF2IP4-202ENST00000544802 APAF1O14727 1248 aa23.51■■□□□ 1.35
GTF2IP4-202ENST00000544802 PLEKHD1A6NEE1 506 aa23.51■■□□□ 1.35
GTF2IP4-202ENST00000544802 FAM161AQ3B820 660 aa23.49■■□□□ 1.35
GTF2IP4-202ENST00000544802 USP35Q9P2H5 1018 aa23.49■■□□□ 1.35
GTF2IP4-202ENST00000544802 HFM1A2PYH4 1435 aa23.49■■□□□ 1.35
GTF2IP4-202ENST00000544802 MFAP1P55081 439 aaKnown RBP23.48■■□□□ 1.35
GTF2IP4-202ENST00000544802 POGKQ9P215 609 aa23.48■■□□□ 1.35
GTF2IP4-202ENST00000544802 BCAR3O75815 825 aa23.48■■□□□ 1.35
GTF2IP4-202ENST00000544802 PANK1Q8TE04 598 aa23.47■■□□□ 1.35
GTF2IP4-202ENST00000544802 SMG6Q86US8 1419 aaKnown RBP23.47■■□□□ 1.35
GTF2IP4-202ENST00000544802 SAFB2Q14151 953 aaKnown RBP eCLIP23.47■■□□□ 1.35
GTF2IP4-202ENST00000544802 KIF15Q9NS87 1388 aa23.47■■□□□ 1.35
GTF2IP4-202ENST00000544802 VSIG10Q8N0Z9 540 aa23.46■■□□□ 1.35
GTF2IP4-202ENST00000544802 CADPSQ9ULU8 1353 aa23.46■■□□□ 1.35
GTF2IP4-202ENST00000544802 GOLGA2Q08379 1002 aa23.46■■□□□ 1.35
GTF2IP4-202ENST00000544802 PCF11O94913 1555 aaKnown RBP23.46■■□□□ 1.35
GTF2IP4-202ENST00000544802 TRIM44Q96DX7 344 aaPredicted RBP23.45■■□□□ 1.34
GTF2IP4-202ENST00000544802 HMGXB3Q12766 1538 aa23.44■■□□□ 1.34
GTF2IP4-202ENST00000544802 TMF1P82094 1093 aa23.44■■□□□ 1.34
GTF2IP4-202ENST00000544802 SLC24A1O60721 1099 aa23.44■■□□□ 1.34
GTF2IP4-202ENST00000544802 FTSJ3Q8IY81 847 aaKnown RBP23.41■■□□□ 1.34
GTF2IP4-202ENST00000544802 PNNQ9H307 717 aaKnown RBP23.4■■□□□ 1.34
GTF2IP4-202ENST00000544802 GLIPR1L2Q4G1C9 344 aa23.39■■□□□ 1.34
GTF2IP4-202ENST00000544802 CASKIN1Q8WXD9 1431 aa23.38■■□□□ 1.33
GTF2IP4-202ENST00000544802 MS4A1P11836 297 aa23.38■■□□□ 1.33
GTF2IP4-202ENST00000544802 CENPQQ7L2Z9 268 aaPredicted RBP23.36■■□□□ 1.33
GTF2IP4-202ENST00000544802 U2SURPO15042 1029 aaKnown RBP23.36■■□□□ 1.33
GTF2IP4-202ENST00000544802 PDS5BQ9NTI5 1447 aa23.36■■□□□ 1.33
GTF2IP4-202ENST00000544802 NCOA1Q15788 1441 aa23.35■■□□□ 1.33
GTF2IP4-202ENST00000544802 APBB1O00213 710 aa23.34■■□□□ 1.33
GTF2IP4-202ENST00000544802 NUTM2DQ5VT03 806 aaPredicted RBP23.33■■□□□ 1.33
GTF2IP4-202ENST00000544802 PDE3BQ13370 1112 aa23.33■■□□□ 1.32
GTF2IP4-202ENST00000544802 GOLGA6L3A6NEY3 463 aa23.29■■□□□ 1.32
GTF2IP4-202ENST00000544802 ANP32BQ92688 251 aaKnown RBP23.29■■□□□ 1.32
GTF2IP4-202ENST00000544802 NESP48681 1621 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms