RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 KDM5BQ9UGL1 1544 aa15.86■□□□□ 0.13
MDH1-216ENST00000544381 EPRSP07814 1512 aaKnown RBP15.85■□□□□ 0.13
MDH1-216ENST00000544381 ZCCHC11Q5TAX3 1644 aaKnown RBP15.85■□□□□ 0.13
MDH1-216ENST00000544381 UACAQ9BZF9 1416 aa15.84■□□□□ 0.13
MDH1-216ENST00000544381 ILDR1Q86SU0 546 aaPredicted RBP15.84■□□□□ 0.13
MDH1-216ENST00000544381 CARMIL2Q6F5E8 1435 aa15.83■□□□□ 0.13
MDH1-216ENST00000544381 UGGT2Q9NYU1 1516 aa15.82■□□□□ 0.12
MDH1-216ENST00000544381 TTBK1Q5TCY1 1321 aaPredicted RBP15.82■□□□□ 0.12
MDH1-216ENST00000544381 KIAA0556O60303 1618 aa15.81■□□□□ 0.12
MDH1-216ENST00000544381 CLIP1P30622 1438 aa15.81■□□□□ 0.12
MDH1-216ENST00000544381 PRR29P0C7W0 189 aa15.8■□□□□ 0.12
MDH1-216ENST00000544381 HECW2Q9P2P5 1572 aa15.8■□□□□ 0.12
MDH1-216ENST00000544381 RANGAP1P46060 587 aaPredicted RBP15.79■□□□□ 0.12
MDH1-216ENST00000544381 PRKAR2AP13861 404 aaKnown RBP15.73■□□□□ 0.11
MDH1-216ENST00000544381 TEX14Q8IWB6 1497 aa15.73■□□□□ 0.11
MDH1-216ENST00000544381 WDR7Q9Y4E6 1490 aa15.72■□□□□ 0.11
MDH1-216ENST00000544381 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.11
MDH1-216ENST00000544381 CTTNBP2Q8WZ74 1663 aa15.71■□□□□ 0.11
MDH1-216ENST00000544381 ABCA8O94911 1581 aa15.7■□□□□ 0.1
MDH1-216ENST00000544381 CFAP43Q8NDM7 1665 aa15.69■□□□□ 0.1
MDH1-216ENST00000544381 MAGI3Q5TCQ9 1506 aa15.67■□□□□ 0.1
MDH1-216ENST00000544381 VPS8Q8N3P4 1428 aa15.65■□□□□ 0.1
MDH1-216ENST00000544381 ARHGAP35Q9NRY4 1499 aa15.64■□□□□ 0.09
MDH1-216ENST00000544381 CHADLQ6NUI6 762 aa15.63■□□□□ 0.09
MDH1-216ENST00000544381 PROM2Q8N271 834 aa15.62■□□□□ 0.09
MDH1-216ENST00000544381 CD109Q6YHK3 1445 aa15.61■□□□□ 0.09
MDH1-216ENST00000544381 EFCAB5A4FU69 1503 aa15.59■□□□□ 0.09
MDH1-216ENST00000544381 HAX1O00165 279 aa15.59■□□□□ 0.09
MDH1-216ENST00000544381 FKBP8Q14318 412 aa15.59■□□□□ 0.09
MDH1-216ENST00000544381 TRIM26Q12899 539 aaPredicted RBP15.56■□□□□ 0.08
MDH1-216ENST00000544381 PPARGC1BQ86YN6 1023 aaKnown RBP15.56■□□□□ 0.08
MDH1-216ENST00000544381 P3H3Q8IVL6 736 aa15.56■□□□□ 0.08
MDH1-216ENST00000544381 ARAP3Q8WWN8 1544 aa15.56■□□□□ 0.08
MDH1-216ENST00000544381 ADAMTSL3P82987 1691 aa15.56■□□□□ 0.08
MDH1-216ENST00000544381 ABCA9Q8IUA7 1624 aa15.54■□□□□ 0.08
MDH1-216ENST00000544381 FRMPD1Q5SYB0 1578 aa15.53■□□□□ 0.08
MDH1-216ENST00000544381 PCGF6Q9BYE7 350 aa15.52■□□□□ 0.08
MDH1-216ENST00000544381 ATP10BO94823 1461 aa15.51■□□□□ 0.07
MDH1-216ENST00000544381 KCNH8Q96L42 1107 aa15.51■□□□□ 0.07
MDH1-216ENST00000544381 SAMD9Q5K651 1589 aa15.51■□□□□ 0.07
MDH1-216ENST00000544381 FHOD3Q2V2M9 1422 aa15.51■□□□□ 0.07
MDH1-216ENST00000544381 PTPRMP28827 1452 aa15.48■□□□□ 0.07
MDH1-216ENST00000544381 BCORL1Q5H9F3 1711 aa15.48■□□□□ 0.07
MDH1-216ENST00000544381 FMN1Q68DA7 1419 aa15.47■□□□□ 0.07
MDH1-216ENST00000544381 MADDQ8WXG6 1647 aa15.46■□□□□ 0.06
MDH1-216ENST00000544381 CREBZFQ9NS37 354 aa15.45■□□□□ 0.06
MDH1-216ENST00000544381 FARP1Q9Y4F1 1045 aaPredicted RBP15.45■□□□□ 0.06
MDH1-216ENST00000544381 ARID3CA6NKF2 412 aa15.43■□□□□ 0.06
MDH1-216ENST00000544381 RAPGEF6Q8TEU7 1601 aa15.43■□□□□ 0.06
MDH1-216ENST00000544381 SIGLEC1Q9BZZ2 1709 aa15.43■□□□□ 0.06
MDH1-216ENST00000544381 ATP1B4Q9UN42 357 aaPredicted RBP15.43■□□□□ 0.06
MDH1-216ENST00000544381 PCF11O94913 1555 aaKnown RBP15.42■□□□□ 0.06
MDH1-216ENST00000544381 NEO1Q92859 1461 aa15.41■□□□□ 0.06
MDH1-216ENST00000544381 LMTK3Q96Q04 1460 aa15.41■□□□□ 0.06
MDH1-216ENST00000544381 FYCO1Q9BQS8 1478 aa15.41■□□□□ 0.06
MDH1-216ENST00000544381 CASKIN1Q8WXD9 1431 aa15.41■□□□□ 0.06
MDH1-216ENST00000544381 RAPGEF3O95398 923 aa15.41■□□□□ 0.06
MDH1-216ENST00000544381 SP7Q8TDD2 431 aaPredicted RBP15.41■□□□□ 0.06
MDH1-216ENST00000544381 RICTORQ6R327 1708 aa15.41■□□□□ 0.06
MDH1-216ENST00000544381 ARHGEF40Q8TER5 1519 aa15.4■□□□□ 0.06
MDH1-216ENST00000544381 NUP153P49790 1475 aaKnown RBP15.4■□□□□ 0.06
MDH1-216ENST00000544381 FBXO41Q8TF61 875 aa15.4■□□□□ 0.06
MDH1-216ENST00000544381 MAP3K1Q13233 1512 aa15.39■□□□□ 0.05
MDH1-216ENST00000544381 C19orf67A6NJJ6 358 aa15.39■□□□□ 0.05
MDH1-216ENST00000544381 PHLDB1Q86UU1 1377 aa15.38■□□□□ 0.05
MDH1-216ENST00000544381 EVX2Q03828 476 aa15.38■□□□□ 0.05
MDH1-216ENST00000544381 RIMS1Q86UR5 1692 aaKnown RBP15.37■□□□□ 0.05
MDH1-216ENST00000544381 TIAM1Q13009 1591 aa15.36■□□□□ 0.05
MDH1-216ENST00000544381 KANK4Q5T7N3 995 aaPredicted RBP15.35■□□□□ 0.05
MDH1-216ENST00000544381 TTC37Q6PGP7 1564 aa15.32■□□□□ 0.04
MDH1-216ENST00000544381 ZMYM4Q5VZL5 1548 aa15.32■□□□□ 0.04
MDH1-216ENST00000544381 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.31■□□□□ 0.048e-6■□□□□ 10.5
MDH1-216ENST00000544381 HECW1Q76N89 1606 aa15.3■□□□□ 0.04
MDH1-216ENST00000544381 LRRC9Q6ZRR7 1453 aa15.3■□□□□ 0.04
MDH1-216ENST00000544381 DENND4BO75064 1496 aaPredicted RBP15.28■□□□□ 0.04
MDH1-216ENST00000544381 CCDC18Q5T9S5 1454 aa15.28■□□□□ 0.04
MDH1-216ENST00000544381 YEATS2Q9ULM3 1422 aa15.27■□□□□ 0.04
MDH1-216ENST00000544381 AKNAQ7Z591 1439 aa15.27■□□□□ 0.03
MDH1-216ENST00000544381 FANCAO15360 1455 aa15.26■□□□□ 0.03
MDH1-216ENST00000544381 CD44P16070 742 aaKnown RBP15.26■□□□□ 0.03
MDH1-216ENST00000544381 CFAP74Q9C0B2 1584 aa15.26■□□□□ 0.03
MDH1-216ENST00000544381 LRRIQ1Q96JM4 1722 aa15.26■□□□□ 0.03
MDH1-216ENST00000544381 ZFYVE16Q7Z3T8 1539 aa15.25■□□□□ 0.03
MDH1-216ENST00000544381 FER1L4A9Z1Z3 1794 aa15.24■□□□□ 0.03
MDH1-216ENST00000544381 HSPA2P54652 639 aa15.23■□□□□ 0.03
MDH1-216ENST00000544381 MIER1Q8N108 512 aa15.23■□□□□ 0.03
MDH1-216ENST00000544381 MTUS2Q5JR59 1369 aa15.23■□□□□ 0.03
MDH1-216ENST00000544381 MNX1P50219 401 aaPredicted RBP15.22■□□□□ 0.03
MDH1-216ENST00000544381 ARID4BQ4LE39 1312 aaPredicted RBP15.22■□□□□ 0.03
MDH1-216ENST00000544381 CDK13Q14004 1512 aaKnown RBP15.22■□□□□ 0.03
MDH1-216ENST00000544381 PLEKHG5O94827 1062 aa15.21■□□□□ 0.03
MDH1-216ENST00000544381 ARHGEF12Q9NZN5 1544 aa15.2■□□□□ 0.02
MDH1-216ENST00000544381 EHBP1L1Q8N3D4 1523 aa15.19■□□□□ 0.02
MDH1-216ENST00000544381 POGZQ7Z3K3 1410 aa15.19■□□□□ 0.02
MDH1-216ENST00000544381 MAGI2Q86UL8 1455 aa15.18■□□□□ 0.02
MDH1-216ENST00000544381 FBXO3Q9UK99 471 aa15.17■□□□□ 0.02
MDH1-216ENST00000544381 CDK11AQ9UQ88 783 aaPredicted RBP15.17■□□□□ 0.02
MDH1-216ENST00000544381 PLCD3Q8N3E9 789 aa15.17■□□□□ 0.02
MDH1-216ENST00000544381 STRCQ7RTU9 1775 aa15.17■□□□□ 0.02
MDH1-216ENST00000544381 RRBP1Q9P2E9 1410 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms