RNA–Protein interactions for RNA: ENST00000544154.1

NPIPB3-213, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-213ENST00000544154 ZNF775Q96BV0 537 aaPredicted RBP6.79□□□□□ -1.32
NPIPB3-213ENST00000544154 PLCD3Q8N3E9 789 aa6.77□□□□□ -1.33
NPIPB3-213ENST00000544154 PSEN1P49768 467 aa6.76□□□□□ -1.33
NPIPB3-213ENST00000544154 ZBTB47Q9UFB7 747 aaPredicted RBP6.75□□□□□ -1.33
NPIPB3-213ENST00000544154 ZNF467Q7Z7K2 595 aaPredicted RBP6.74□□□□□ -1.33
NPIPB3-213ENST00000544154 TK2O00142 265 aa6.73□□□□□ -1.33
NPIPB3-213ENST00000544154 PTPN5P54829 565 aa6.72□□□□□ -1.33
NPIPB3-213ENST00000544154 LHX6Q9UPM6 363 aa6.71□□□□□ -1.34
NPIPB3-213ENST00000544154 ARHGAP33O14559 1287 aa6.7□□□□□ -1.34
NPIPB3-213ENST00000544154 DMRTA1Q5VZB9 504 aa6.7□□□□□ -1.34
NPIPB3-213ENST00000544154 LAPTM4AQ15012 233 aa6.69□□□□□ -1.34
NPIPB3-213ENST00000544154 ZNF787Q6DD87 383 aa6.69□□□□□ -1.34
NPIPB3-213ENST00000544154 NUDT7P0C024 238 aa6.68□□□□□ -1.34
NPIPB3-213ENST00000544154 MICALL2Q8IY33 904 aa6.68□□□□□ -1.34
NPIPB3-213ENST00000544154 CABP2Q9NPB3 220 aa6.68□□□□□ -1.34
NPIPB3-213ENST00000544154 GFRA3O60609 400 aa6.64□□□□□ -1.35
NPIPB3-213ENST00000544154 PSEN2P49810 448 aa6.62□□□□□ -1.35
NPIPB3-213ENST00000544154 CHRM1P11229 460 aaPredicted RBP6.61□□□□□ -1.35
NPIPB3-213ENST00000544154 EHMT2Q96KQ7 1210 aa6.61□□□□□ -1.35
NPIPB3-213ENST00000544154 PDAP1Q13442 181 aaKnown RBP6.6□□□□□ -1.35
NPIPB3-213ENST00000544154 LCE2AQ5TA79 106 aaPredicted RBP6.6□□□□□ -1.35
NPIPB3-213ENST00000544154 THSD4Q6ZMP0 1018 aa6.59□□□□□ -1.35
NPIPB3-213ENST00000544154 ITGBL1O95965 494 aaPredicted RBP6.56□□□□□ -1.36
NPIPB3-213ENST00000544154 STAC3Q96MF2 364 aa6.54□□□□□ -1.36
NPIPB3-213ENST00000544154 NRG2O14511 850 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-213ENST00000544154 PCDHGA4Q9Y5G9 962 aa6.53□□□□□ -1.36
NPIPB3-213ENST00000544154 EFCAB3Q8N7B9 438 aa6.51□□□□□ -1.37
NPIPB3-213ENST00000544154 VPS9D1Q9Y2B5 631 aa6.51□□□□□ -1.37
NPIPB3-213ENST00000544154 KDM4FA0A1W2PPD8 638 aa6.5□□□□□ -1.37
NPIPB3-213ENST00000544154 MS4A4AQ96JQ5 239 aa6.5□□□□□ -1.37
NPIPB3-213ENST00000544154 BHMG1C9JSJ3 638 aaPredicted RBP6.48□□□□□ -1.37
NPIPB3-213ENST00000544154 SLC34A2O95436 690 aa6.48□□□□□ -1.37
NPIPB3-213ENST00000544154 TREML4Q6UXN2 200 aa6.48□□□□□ -1.37
NPIPB3-213ENST00000544154 PSDA5PKW4 1024 aaPredicted RBP6.47□□□□□ -1.37
NPIPB3-213ENST00000544154 KIF3CO14782 793 aa6.46□□□□□ -1.38
NPIPB3-213ENST00000544154 POTECB2RU33 542 aa6.45□□□□□ -1.38
NPIPB3-213ENST00000544154 GSE1Q14687 1217 aa6.45□□□□□ -1.38
NPIPB3-213ENST00000544154 SUZ12Q15022 739 aaKnown RBP6.44□□□□□ -1.38
NPIPB3-213ENST00000544154 WNT2BQ93097 391 aa6.44□□□□□ -1.38
NPIPB3-213ENST00000544154 STK17AQ9UEE5 414 aa6.44□□□□□ -1.38
NPIPB3-213ENST00000544154 CSRNP3Q8WYN3 585 aa6.42□□□□□ -1.38
NPIPB3-213ENST00000544154 C2orf72A6NCS6 295 aa6.39□□□□□ -1.39
NPIPB3-213ENST00000544154 KCNK17Q96T54 332 aa6.39□□□□□ -1.39
NPIPB3-213ENST00000544154 SLC4A5Q9BY07 1137 aa6.39□□□□□ -1.39
NPIPB3-213ENST00000544154 PRKD2Q9BZL6 878 aa6.36□□□□□ -1.39
NPIPB3-213ENST00000544154 KCNC4Q03721 635 aa6.35□□□□□ -1.39
NPIPB3-213ENST00000544154 GOLGA8CPA6NN73 597 aa6.34□□□□□ -1.39
NPIPB3-213ENST00000544154 PPP4R3BQ5MIZ7 849 aa6.34□□□□□ -1.39
NPIPB3-213ENST00000544154 PHF8Q9UPP1 1060 aa6.34□□□□□ -1.39
NPIPB3-213ENST00000544154 SOX12O15370 315 aa6.33□□□□□ -1.4
NPIPB3-213ENST00000544154 MRPL50Q8N5N7 158 aaKnown RBP6.31□□□□□ -1.4
NPIPB3-213ENST00000544154 PDZRN3Q9UPQ7 1066 aa6.31□□□□□ -1.4
NPIPB3-213ENST00000544154 WIPF1O43516 503 aa6.29□□□□□ -1.4
NPIPB3-213ENST00000544154 V9GY48 417 aaPredicted RBP6.29□□□□□ -1.4
NPIPB3-213ENST00000544154 MYT1Q01538 1121 aa6.28□□□□□ -1.4
NPIPB3-213ENST00000544154 ZBED2Q9BTP6 218 aa6.28□□□□□ -1.4
NPIPB3-213ENST00000544154 PTCD2Q8WV60 388 aaKnown RBP6.26□□□□□ -1.41
NPIPB3-213ENST00000544154 WFS1O76024 890 aa6.25□□□□□ -1.41
NPIPB3-213ENST00000544154 KCNH8Q96L42 1107 aa6.25□□□□□ -1.41
NPIPB3-213ENST00000544154 BCAMP50895 628 aa6.24□□□□□ -1.41
NPIPB3-213ENST00000544154 INSM1Q01101 510 aaPredicted RBP6.24□□□□□ -1.41
NPIPB3-213ENST00000544154 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
NPIPB3-213ENST00000544154 NYAP1Q6ZVC0 841 aa6.22□□□□□ -1.41
NPIPB3-213ENST00000544154 BCL2L12Q9HB09 334 aa6.22□□□□□ -1.41
NPIPB3-213ENST00000544154 WBP1LQ9NX94 342 aa6.22□□□□□ -1.41
NPIPB3-213ENST00000544154 NFX1Q12986 1120 aaKnown RBP6.21□□□□□ -1.42
NPIPB3-213ENST00000544154 FBXO22Q8NEZ5 403 aa6.21□□□□□ -1.42
NPIPB3-213ENST00000544154 KRTAP4-8Q9BYQ9 185 aa6.21□□□□□ -1.42
NPIPB3-213ENST00000544154 TRIM67Q6ZTA4 783 aa6.2□□□□□ -1.42
NPIPB3-213ENST00000544154 SOWAHBA6NEL2 793 aa6.19□□□□□ -1.42
NPIPB3-213ENST00000544154 ANKK1Q8NFD2 765 aa6.19□□□□□ -1.42
NPIPB3-213ENST00000544154 NBPF3Q9H094 633 aa6.19□□□□□ -1.42
NPIPB3-213ENST00000544154 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.18□□□□□ -1.42
NPIPB3-213ENST00000544154 PPP1R18Q6NYC8 613 aa6.17□□□□□ -1.42
NPIPB3-213ENST00000544154 DGAT1O75907 488 aa6.14□□□□□ -1.43
NPIPB3-213ENST00000544154 KLHL34Q8N239 644 aa6.14□□□□□ -1.43
NPIPB3-213ENST00000544154 PTPREP23469 700 aa6.13□□□□□ -1.43
NPIPB3-213ENST00000544154 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
NPIPB3-213ENST00000544154 NLRP6P59044 892 aa6.12□□□□□ -1.43
NPIPB3-213ENST00000544154 PKDCCQ504Y2 493 aa6.12□□□□□ -1.43
NPIPB3-213ENST00000544154 TJAP1Q5JTD0 557 aa6.12□□□□□ -1.43
NPIPB3-213ENST00000544154 TMC2Q8TDI7 906 aa6.12□□□□□ -1.43
NPIPB3-213ENST00000544154 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
NPIPB3-213ENST00000544154 ZNF454Q8N9F8 522 aa6.11□□□□□ -1.43
NPIPB3-213ENST00000544154 LORP23490 312 aaPredicted RBP6.1□□□□□ -1.43
NPIPB3-213ENST00000544154 ST8SIA5O15466 376 aa6.09□□□□□ -1.43
NPIPB3-213ENST00000544154 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.09□□□□□ -1.43
NPIPB3-213ENST00000544154 AAASQ9NRG9 546 aa6.09□□□□□ -1.43
NPIPB3-213ENST00000544154 RABGEF1Q9UJ41 708 aa6.09□□□□□ -1.43
NPIPB3-213ENST00000544154 ZFRQ96KR1 1074 aaKnown RBP6.08□□□□□ -1.44
NPIPB3-213ENST00000544154 CIZ1Q9ULV3 898 aaPredicted RBP6.08□□□□□ -1.44
NPIPB3-213ENST00000544154 FOSBP53539 338 aa6.07□□□□□ -1.44
NPIPB3-213ENST00000544154 XP32Q5T750 250 aa6.07□□□□□ -1.44
NPIPB3-213ENST00000544154 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.06□□□□□ -1.44
NPIPB3-213ENST00000544154 ZFP91Q96JP5 570 aaPredicted RBP6.06□□□□□ -1.44
NPIPB3-213ENST00000544154 PROX2Q3B8N5 592 aa6.05□□□□□ -1.44
NPIPB3-213ENST00000544154 LAPTM4BQ86VI4 370 aa6.05□□□□□ -1.44
NPIPB3-213ENST00000544154 MFRPQ9BY79 579 aa6.05□□□□□ -1.44
NPIPB3-213ENST00000544154 KRTAP1-3Q8IUG1 177 aa6.04□□□□□ -1.44
NPIPB3-213ENST00000544154 DACH1Q9UI36 760 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms