RNA–Protein interactions for RNA: ENST00000544105.5

LDHC-208, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-208ENST00000544105 CCER1Q8TC90 406 aaPredicted RBP15.48■□□□□ 0.07
LDHC-208ENST00000544105 ABCA8O94911 1581 aa15.48■□□□□ 0.07
LDHC-208ENST00000544105 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
LDHC-208ENST00000544105 UACAQ9BZF9 1416 aa15.47■□□□□ 0.07
LDHC-208ENST00000544105 FOXD4L1Q9NU39 408 aa15.46■□□□□ 0.07
LDHC-208ENST00000544105 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.46■□□□□ 0.07
LDHC-208ENST00000544105 ITGAEP38570 1179 aa15.45■□□□□ 0.06
LDHC-208ENST00000544105 MYOM3Q5VTT5 1437 aa15.44■□□□□ 0.06
LDHC-208ENST00000544105 TROQ12816 1431 aaPredicted RBP15.43■□□□□ 0.06
LDHC-208ENST00000544105 FGD6Q6ZV73 1430 aa15.43■□□□□ 0.06
LDHC-208ENST00000544105 ATP10BO94823 1461 aa15.41■□□□□ 0.06
LDHC-208ENST00000544105 MAGI3Q5TCQ9 1506 aa15.41■□□□□ 0.06
LDHC-208ENST00000544105 MIA2Q96PC5 1412 aa15.39■□□□□ 0.05
LDHC-208ENST00000544105 ARHGEF11O15085 1522 aa15.38■□□□□ 0.05
LDHC-208ENST00000544105 ERCC6L2Q5T890 1561 aa15.38■□□□□ 0.05
LDHC-208ENST00000544105 ABCC2Q92887 1545 aa15.37■□□□□ 0.05
LDHC-208ENST00000544105 UHRF1BP1LA0JNW5 1464 aa15.35■□□□□ 0.05
LDHC-208ENST00000544105 PTPN23Q9H3S7 1636 aa15.33■□□□□ 0.04
LDHC-208ENST00000544105 CFDP1Q9UEE9 299 aaPredicted RBP15.33■□□□□ 0.04
LDHC-208ENST00000544105 KIF14Q15058 1648 aa15.32■□□□□ 0.04
LDHC-208ENST00000544105 NPM1P06748 294 aaKnown RBP eCLIP15.31■□□□□ 0.04
LDHC-208ENST00000544105 TCOF1Q13428 1488 aaKnown RBP15.31■□□□□ 0.04
LDHC-208ENST00000544105 ADCY10Q96PN6 1610 aa15.31■□□□□ 0.04
LDHC-208ENST00000544105 SETD5Q9C0A6 1442 aa15.3■□□□□ 0.04
LDHC-208ENST00000544105 ITSN2Q9NZM3 1697 aa15.28■□□□□ 0.04
LDHC-208ENST00000544105 ZBTB12Q9Y330 459 aaPredicted RBP15.28■□□□□ 0.04
LDHC-208ENST00000544105 KDM5BQ9UGL1 1544 aa15.27■□□□□ 0.03
LDHC-208ENST00000544105 ZNF777Q9ULD5 760 aaPredicted RBP15.26■□□□□ 0.03
LDHC-208ENST00000544105 GPATCH8Q9UKJ3 1502 aaKnown RBP15.26■□□□□ 0.03
LDHC-208ENST00000544105 ACIN1Q9UKV3 1341 aaKnown RBP15.25■□□□□ 0.03
LDHC-208ENST00000544105 KCNH8Q96L42 1107 aa15.25■□□□□ 0.03
LDHC-208ENST00000544105 RAB3GAP2Q9H2M9 1393 aa15.24■□□□□ 0.03
LDHC-208ENST00000544105 CLSPNQ9HAW4 1339 aa15.24■□□□□ 0.03
LDHC-208ENST00000544105 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
LDHC-208ENST00000544105 ZCCHC11Q5TAX3 1644 aaKnown RBP15.23■□□□□ 0.03
LDHC-208ENST00000544105 ABCC10Q5T3U5 1492 aa15.22■□□□□ 0.03
LDHC-208ENST00000544105 RSPH4AQ5TD94 716 aa15.2■□□□□ 0.02
LDHC-208ENST00000544105 CHRDL2Q6WN34 429 aa15.2■□□□□ 0.02
LDHC-208ENST00000544105 CHIC2Q9UKJ5 165 aa15.2■□□□□ 0.02
LDHC-208ENST00000544105 ZNF644Q9H582 1327 aaPredicted RBP15.19■□□□□ 0.02
LDHC-208ENST00000544105 HFM1A2PYH4 1435 aa15.19■□□□□ 0.02
LDHC-208ENST00000544105 CAMSAP2Q08AD1 1489 aa15.19■□□□□ 0.02
LDHC-208ENST00000544105 DAPK1P53355 1430 aa15.18■□□□□ 0.02
LDHC-208ENST00000544105 TSPY4P0CV99 314 aa15.18■□□□□ 0.02
LDHC-208ENST00000544105 TSPY10P0CW01 314 aa15.18■□□□□ 0.02
LDHC-208ENST00000544105 PTPRKQ15262 1439 aa15.17■□□□□ 0.02
LDHC-208ENST00000544105 ROCK1Q13464 1354 aa15.17■□□□□ 0.02
LDHC-208ENST00000544105 DHX57Q6P158 1386 aaKnown RBP15.17■□□□□ 0.02
LDHC-208ENST00000544105 RRP7BPQ9NSQ0 103 aa15.17■□□□□ 0.02
LDHC-208ENST00000544105 AKNAQ7Z591 1439 aa15.17■□□□□ 0.02
LDHC-208ENST00000544105 EFCAB2Q5VUJ9 269 aa15.16■□□□□ 0.02
LDHC-208ENST00000544105 CDC42BPAQ5VT25 1732 aa15.16■□□□□ 0.02
LDHC-208ENST00000544105 ABCC5O15440 1437 aa15.16■□□□□ 0.02
LDHC-208ENST00000544105 DNMT1P26358 1616 aaKnown RBP15.15■□□□□ 0.02
LDHC-208ENST00000544105 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.15■□□□□ 0.02
LDHC-208ENST00000544105 WDR7Q9Y4E6 1490 aa15.14■□□□□ 0.01
LDHC-208ENST00000544105 NAIPQ13075 1403 aa15.14■□□□□ 0.01
LDHC-208ENST00000544105 PLEKHH2Q8IVE3 1493 aa15.14■□□□□ 0.01
LDHC-208ENST00000544105 ARHGAP5Q13017 1502 aa15.13■□□□□ 0.01
LDHC-208ENST00000544105 ANKRD30AQ9BXX3 1397 aa15.12■□□□□ 0.01
LDHC-208ENST00000544105 PLCH2O75038 1416 aa15.12■□□□□ 0.01
LDHC-208ENST00000544105 PREX2Q70Z35 1606 aa15.12■□□□□ 0.01
LDHC-208ENST00000544105 ASXL2Q76L83 1435 aa15.11■□□□□ 0.01
LDHC-208ENST00000544105 CYB5RLQ6IPT4 315 aa15.11■□□□□ 0.01
LDHC-208ENST00000544105 MYO5CQ9NQX4 1742 aa15.11■□□□□ 0.01
LDHC-208ENST00000544105 HNRNPMP52272 730 aaKnown RBP eCLIP15.1■□□□□ 0.01
LDHC-208ENST00000544105 TRIM52Q96A61 297 aa15.1■□□□□ 0.01
LDHC-208ENST00000544105 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
LDHC-208ENST00000544105 TTC37Q6PGP7 1564 aa15.09■□□□□ 0.01
LDHC-208ENST00000544105 KIAA1107Q9UPP5 1409 aa15.08■□□□□ 0
LDHC-208ENST00000544105 ARHGEF5Q12774 1597 aa15.07■□□□□ 0
LDHC-208ENST00000544105 GCC2Q8IWJ2 1684 aa15.07■□□□□ 0
LDHC-208ENST00000544105 CDC42BPBQ9Y5S2 1711 aa15.07■□□□□ 0
LDHC-208ENST00000544105 SHANK2Q9UPX8 1470 aa15.07■□□□□ 0
LDHC-208ENST00000544105 CCDC141Q6ZP82 1450 aa15.06■□□□□ 0
LDHC-208ENST00000544105 ARAP3Q8WWN8 1544 aa15.06■□□□□ 0
LDHC-208ENST00000544105 NCOA1Q15788 1441 aa15.05■□□□□ -0
LDHC-208ENST00000544105 C9orf84Q5VXU9 1444 aa15.05■□□□□ -0
LDHC-208ENST00000544105 ADGRL2O95490 1459 aa15.05■□□□□ -0
LDHC-208ENST00000544105 SAMD9LQ8IVG5 1584 aa15.05■□□□□ -0
LDHC-208ENST00000544105 ADGBQ8N7X0 1667 aa15.04■□□□□ -0
LDHC-208ENST00000544105 RIMBP3CA6NJZ7 1639 aa15.04■□□□□ -0
LDHC-208ENST00000544105 RIMBP3BA6NNM3 1639 aa15.04■□□□□ -0
LDHC-208ENST00000544105 RIMBP3Q9UFD9 1639 aa15.04■□□□□ -0
LDHC-208ENST00000544105 MBD5Q9P267 1494 aa15.03■□□□□ -0
LDHC-208ENST00000544105 CROCC2H7BZ55 1655 aa15.03■□□□□ -0
LDHC-208ENST00000544105 ZBTB22O15209 634 aa15.02■□□□□ -0
LDHC-208ENST00000544105 ABCA9Q8IUA7 1624 aa15.02□□□□□ -0.01
LDHC-208ENST00000544105 TIMELESSQ9UNS1 1208 aa15□□□□□ -0.01
LDHC-208ENST00000544105 SYCP2Q9BX26 1530 aa15□□□□□ -0.01
LDHC-208ENST00000544105 FANCAO15360 1455 aa14.99□□□□□ -0.01
LDHC-208ENST00000544105 ANKRD50Q9ULJ7 1429 aa14.99□□□□□ -0.01
LDHC-208ENST00000544105 MPHOSPH9Q99550 1183 aa14.98□□□□□ -0.01
LDHC-208ENST00000544105 CD109Q6YHK3 1445 aa14.98□□□□□ -0.01
LDHC-208ENST00000544105 KIF15Q9NS87 1388 aa14.98□□□□□ -0.01
LDHC-208ENST00000544105 NEUROD1Q13562 356 aa14.97□□□□□ -0.01
LDHC-208ENST00000544105 ATXN8OSP0DMR3 200 aa14.96□□□□□ -0.01
LDHC-208ENST00000544105 MYT1LQ9UL68 1186 aa14.96□□□□□ -0.01
LDHC-208ENST00000544105 MAST1Q9Y2H9 1570 aa14.96□□□□□ -0.01
LDHC-208ENST00000544105 MAPKBP1O60336 1514 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms