RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 CAMSAP2Q08AD1 1489 aa24.14■■□□□ 1.45
XRCC1-202ENST00000543982 CDC42BPBQ9Y5S2 1711 aa24.13■■□□□ 1.45
XRCC1-202ENST00000543982 ABCA9Q8IUA7 1624 aa24.13■■□□□ 1.45
XRCC1-202ENST00000543982 PREX2Q70Z35 1606 aa24.12■■□□□ 1.45
XRCC1-202ENST00000543982 ITSN2Q9NZM3 1697 aa24.11■■□□□ 1.45
XRCC1-202ENST00000543982 HNRNPMP52272 730 aaKnown RBP eCLIP24.11■■□□□ 1.45
XRCC1-202ENST00000543982 ARHGAP5Q13017 1502 aa24.1■■□□□ 1.45
XRCC1-202ENST00000543982 FAM69CQ0P6D2 419 aa24.1■■□□□ 1.45
XRCC1-202ENST00000543982 SAMD9LQ8IVG5 1584 aa24.08■■□□□ 1.45
XRCC1-202ENST00000543982 ABCC5O15440 1437 aa24.08■■□□□ 1.45
XRCC1-202ENST00000543982 CD109Q6YHK3 1445 aa24.08■■□□□ 1.45
XRCC1-202ENST00000543982 EFCAB2Q5VUJ9 269 aa24.08■■□□□ 1.45
XRCC1-202ENST00000543982 CHIC2Q9UKJ5 165 aa24.08■■□□□ 1.45
XRCC1-202ENST00000543982 MYO5CQ9NQX4 1742 aa24.07■■□□□ 1.44
XRCC1-202ENST00000543982 ARHGEF12Q9NZN5 1544 aa24.05■■□□□ 1.44
XRCC1-202ENST00000543982 MBD5Q9P267 1494 aa24.05■■□□□ 1.44
XRCC1-202ENST00000543982 DAPK1P53355 1430 aa24.04■■□□□ 1.44
XRCC1-202ENST00000543982 DIP2BQ9P265 1576 aa24.03■■□□□ 1.44
XRCC1-202ENST00000543982 FANCAO15360 1455 aa24.01■■□□□ 1.43
XRCC1-202ENST00000543982 GLI2P10070 1586 aa24■■□□□ 1.43
XRCC1-202ENST00000543982 ARAP3Q8WWN8 1544 aa24■■□□□ 1.43
XRCC1-202ENST00000543982 SYCP2Q9BX26 1530 aa23.99■■□□□ 1.43
XRCC1-202ENST00000543982 RRP7BPQ9NSQ0 103 aa23.98■■□□□ 1.43
XRCC1-202ENST00000543982 DNMT1P26358 1616 aaKnown RBP23.98■■□□□ 1.43
XRCC1-202ENST00000543982 KIAA1107Q9UPP5 1409 aa23.97■■□□□ 1.43
XRCC1-202ENST00000543982 TRAPPC8Q9Y2L5 1435 aa23.96■■□□□ 1.43
XRCC1-202ENST00000543982 MAP3K4Q9Y6R4 1608 aa23.95■■□□□ 1.43
XRCC1-202ENST00000543982 AKNAQ7Z591 1439 aa23.94■■□□□ 1.42
XRCC1-202ENST00000543982 AFAP1Q8N556 730 aa23.94■■□□□ 1.42
XRCC1-202ENST00000543982 ABCC1P33527 1531 aa23.93■■□□□ 1.42
XRCC1-202ENST00000543982 SCAPERQ9BY12 1400 aa23.91■■□□□ 1.42
XRCC1-202ENST00000543982 PLEKHH2Q8IVE3 1493 aa23.91■■□□□ 1.42
XRCC1-202ENST00000543982 ARHGEF5Q12774 1597 aa23.9■■□□□ 1.42
XRCC1-202ENST00000543982 NAIPQ13075 1403 aa23.9■■□□□ 1.42
XRCC1-202ENST00000543982 SETD5Q9C0A6 1442 aa23.9■■□□□ 1.42
XRCC1-202ENST00000543982 CCDC141Q6ZP82 1450 aa23.9■■□□□ 1.42
XRCC1-202ENST00000543982 RAB3GAP2Q9H2M9 1393 aa23.89■■□□□ 1.42
XRCC1-202ENST00000543982 ADGRL1O94910 1474 aa23.89■■□□□ 1.41
XRCC1-202ENST00000543982 TSPY4P0CV99 314 aa23.88■■□□□ 1.41
XRCC1-202ENST00000543982 TSPY10P0CW01 314 aa23.88■■□□□ 1.41
XRCC1-202ENST00000543982 HFM1A2PYH4 1435 aa23.88■■□□□ 1.41
XRCC1-202ENST00000543982 C9orf84Q5VXU9 1444 aa23.88■■□□□ 1.41
XRCC1-202ENST00000543982 KIF13AQ9H1H9 1805 aa23.88■■□□□ 1.41
XRCC1-202ENST00000543982 RSPH4AQ5TD94 716 aa23.87■■□□□ 1.41
XRCC1-202ENST00000543982 NCOA1Q15788 1441 aa23.87■■□□□ 1.41
XRCC1-202ENST00000543982 ROCK1Q13464 1354 aa23.86■■□□□ 1.41
XRCC1-202ENST00000543982 PPRC1Q5VV67 1664 aaKnown RBP23.85■■□□□ 1.41
XRCC1-202ENST00000543982 RAPGEF3O95398 923 aa23.83■■□□□ 1.41
XRCC1-202ENST00000543982 CROCC2H7BZ55 1655 aa23.83■■□□□ 1.41
XRCC1-202ENST00000543982 NEO1Q92859 1461 aa23.83■■□□□ 1.41
XRCC1-202ENST00000543982 SHANK2Q9UPX8 1470 aa23.83■■□□□ 1.41
XRCC1-202ENST00000543982 ADGRL2O95490 1459 aa23.82■■□□□ 1.4
XRCC1-202ENST00000543982 TSPOAP1O95153 1857 aa23.82■■□□□ 1.4
XRCC1-202ENST00000543982 TRHP20396 242 aaPredicted RBP23.82■■□□□ 1.4
XRCC1-202ENST00000543982 KDM6BO15054 1643 aa23.81■■□□□ 1.4
XRCC1-202ENST00000543982 ANKRD30AQ9BXX3 1397 aa23.8■■□□□ 1.4
XRCC1-202ENST00000543982 SPAG9O60271 1321 aaKnown RBP23.78■■□□□ 1.4
XRCC1-202ENST00000543982 POGZQ7Z3K3 1410 aa23.76■■□□□ 1.39
XRCC1-202ENST00000543982 HRCP23327 699 aa23.76■■□□□ 1.39
XRCC1-202ENST00000543982 KIF15Q9NS87 1388 aa23.75■■□□□ 1.39
XRCC1-202ENST00000543982 CFAP74Q9C0B2 1584 aa23.75■■□□□ 1.39
XRCC1-202ENST00000543982 COL17A1Q9UMD9 1497 aaPredicted RBP23.75■■□□□ 1.39
XRCC1-202ENST00000543982 MAST1Q9Y2H9 1570 aa23.75■■□□□ 1.39
XRCC1-202ENST00000543982 DENND4BO75064 1496 aaPredicted RBP23.74■■□□□ 1.39
XRCC1-202ENST00000543982 TEX14Q8IWB6 1497 aa23.72■■□□□ 1.39
XRCC1-202ENST00000543982 ZNF518AQ6AHZ1 1483 aa23.71■■□□□ 1.39
XRCC1-202ENST00000543982 ADGBQ8N7X0 1667 aa23.71■■□□□ 1.39
XRCC1-202ENST00000543982 CCER1Q8TC90 406 aaPredicted RBP23.71■■□□□ 1.39
XRCC1-202ENST00000543982 GCC2Q8IWJ2 1684 aa23.7■■□□□ 1.38
XRCC1-202ENST00000543982 ZFYVE16Q7Z3T8 1539 aa23.7■■□□□ 1.38
XRCC1-202ENST00000543982 RTEL1-TNFRSF6BF6WH68 1400 aa23.7■■□□□ 1.38
XRCC1-202ENST00000543982 DHX57Q6P158 1386 aaKnown RBP23.7■■□□□ 1.38
XRCC1-202ENST00000543982 ANKRD50Q9ULJ7 1429 aa23.69■■□□□ 1.38
XRCC1-202ENST00000543982 MYT1LQ9UL68 1186 aa23.68■■□□□ 1.38
XRCC1-202ENST00000543982 KDM5CP41229 1560 aa23.67■■□□□ 1.38
XRCC1-202ENST00000543982 FRMPD1Q5SYB0 1578 aa23.67■■□□□ 1.38
XRCC1-202ENST00000543982 ATP7AQ04656 1500 aa23.66■■□□□ 1.38
XRCC1-202ENST00000543982 INO80Q9ULG1 1556 aaPredicted RBP23.66■■□□□ 1.38
XRCC1-202ENST00000543982 PLXNC1O60486 1568 aa23.64■■□□□ 1.37
XRCC1-202ENST00000543982 TRIM52Q96A61 297 aa23.63■■□□□ 1.37
XRCC1-202ENST00000543982 MLH3Q9UHC1 1453 aa23.63■■□□□ 1.37
XRCC1-202ENST00000543982 KIDINS220Q9ULH0 1771 aa23.63■■□□□ 1.37
XRCC1-202ENST00000543982 RICTORQ6R327 1708 aa23.63■■□□□ 1.37
XRCC1-202ENST00000543982 YEATS2Q9ULM3 1422 aa23.61■■□□□ 1.37
XRCC1-202ENST00000543982 DUOX2Q9NRD8 1548 aa23.58■■□□□ 1.37
XRCC1-202ENST00000543982 HECW2Q9P2P5 1572 aa23.56■■□□□ 1.36
XRCC1-202ENST00000543982 DHX29Q7Z478 1369 aaKnown RBP23.56■■□□□ 1.36
XRCC1-202ENST00000543982 MPHOSPH9Q99550 1183 aa23.54■■□□□ 1.36
XRCC1-202ENST00000543982 ABCA6Q8N139 1617 aa23.53■■□□□ 1.36
XRCC1-202ENST00000543982 ERBINQ96RT1 1412 aa23.53■■□□□ 1.36
XRCC1-202ENST00000543982 FOXD1Q16676 465 aa23.52■■□□□ 1.36
XRCC1-202ENST00000543982 ZEB1P37275 1124 aaPredicted RBP23.52■■□□□ 1.36
XRCC1-202ENST00000543982 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.52■■□□□ 1.36
XRCC1-202ENST00000543982 ZMYM4Q5VZL5 1548 aa23.52■■□□□ 1.36
XRCC1-202ENST00000543982 A2MP01023 1474 aa23.52■■□□□ 1.36
XRCC1-202ENST00000543982 PZPP20742 1482 aa23.52■■□□□ 1.36
XRCC1-202ENST00000543982 NUP155O75694 1391 aa23.51■■□□□ 1.35
XRCC1-202ENST00000543982 KIF3BO15066 747 aa23.51■■□□□ 1.35
XRCC1-202ENST00000543982 DIP2CQ9Y2E4 1556 aa23.5■■□□□ 1.35
XRCC1-202ENST00000543982 SLC4A1APQ9BWU0 796 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms