RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 PCF11O94913 1555 aaKnown RBP37.27■■■■□ 3.56
CDKN3-207ENST00000543789 MLECQ14165 292 aa37.27■■■■□ 3.56
CDKN3-207ENST00000543789 PLPPR3Q6T4P5 718 aa37.27■■■■□ 3.56
CDKN3-207ENST00000543789 FBXO41Q8TF61 875 aa37.27■■■■□ 3.56
CDKN3-207ENST00000543789 LMTK3Q96Q04 1460 aa37.26■■■■□ 3.55
CDKN3-207ENST00000543789 HECW1Q76N89 1606 aa37.25■■■■□ 3.55
CDKN3-207ENST00000543789 RIMS1Q86UR5 1692 aaKnown RBP37.21■■■■□ 3.55
CDKN3-207ENST00000543789 TROQ12816 1431 aaPredicted RBP37.18■■■■□ 3.54
CDKN3-207ENST00000543789 ATP10AO60312 1499 aa37.16■■■■□ 3.54
CDKN3-207ENST00000543789 HSPA2P54652 639 aa37.16■■■■□ 3.54
CDKN3-207ENST00000543789 CLIP1P30622 1438 aa37.12■■■■□ 3.53
CDKN3-207ENST00000543789 AFAP1Q8N556 730 aa37.11■■■■□ 3.53
CDKN3-207ENST00000543789 SIGLEC1Q9BZZ2 1709 aa37.1■■■■□ 3.53
CDKN3-207ENST00000543789 C9orf84Q5VXU9 1444 aa37.1■■■■□ 3.53
CDKN3-207ENST00000543789 KIF14Q15058 1648 aa37.07■■■■□ 3.53
CDKN3-207ENST00000543789 MYT1LQ9UL68 1186 aa37.06■■■■□ 3.52
CDKN3-207ENST00000543789 ARHGAP5Q13017 1502 aa37.05■■■■□ 3.52
CDKN3-207ENST00000543789 MYO5CQ9NQX4 1742 aa37.05■■■■□ 3.52
CDKN3-207ENST00000543789 ZNF518AQ6AHZ1 1483 aa37.05■■■■□ 3.52
CDKN3-207ENST00000543789 ARHGEF12Q9NZN5 1544 aa37■■■■□ 3.51
CDKN3-207ENST00000543789 CASKIN1Q8WXD9 1431 aa36.97■■■■□ 3.51
CDKN3-207ENST00000543789 CEBPAP49715 358 aaPredicted RBP36.96■■■■□ 3.51
CDKN3-207ENST00000543789 FER1L4A9Z1Z3 1794 aa36.93■■■■□ 3.5
CDKN3-207ENST00000543789 KDM5CP41229 1560 aa36.92■■■■□ 3.5
CDKN3-207ENST00000543789 CCDC18Q5T9S5 1454 aa36.91■■■■□ 3.5
CDKN3-207ENST00000543789 MLH3Q9UHC1 1453 aa36.87■■■■□ 3.49
CDKN3-207ENST00000543789 LRRIQ1Q96JM4 1722 aa36.86■■■■□ 3.49
CDKN3-207ENST00000543789 TRAPPC8Q9Y2L5 1435 aa36.85■■■■□ 3.49
CDKN3-207ENST00000543789 CERKQ8TCT0 537 aa36.81■■■■□ 3.48
CDKN3-207ENST00000543789 CDC42BPBQ9Y5S2 1711 aa36.79■■■■□ 3.48
CDKN3-207ENST00000543789 DIP2CQ9Y2E4 1556 aa36.79■■■■□ 3.48
CDKN3-207ENST00000543789 ESF1Q9H501 851 aaKnown RBP36.79■■■■□ 3.48
CDKN3-207ENST00000543789 REREQ9P2R6 1566 aa36.77■■■■□ 3.48
CDKN3-207ENST00000543789 ABCC1P33527 1531 aa36.76■■■■□ 3.48
CDKN3-207ENST00000543789 PREX2Q70Z35 1606 aa36.75■■■■□ 3.47
CDKN3-207ENST00000543789 ZNF777Q9ULD5 760 aaPredicted RBP36.75■■■■□ 3.47
CDKN3-207ENST00000543789 FYCO1Q9BQS8 1478 aa36.75■■■■□ 3.47
CDKN3-207ENST00000543789 DMRT2Q9Y5R5 561 aa36.74■■■■□ 3.47
CDKN3-207ENST00000543789 UHRF1BP1Q6BDS2 1440 aa36.73■■■■□ 3.47
CDKN3-207ENST00000543789 AGLP35573 1532 aa36.7■■■■□ 3.47
CDKN3-207ENST00000543789 ABCA6Q8N139 1617 aa36.7■■■■□ 3.47
CDKN3-207ENST00000543789 PREX1Q8TCU6 1659 aa36.69■■■■□ 3.46
CDKN3-207ENST00000543789 HNRNPMP52272 730 aaKnown RBP eCLIP36.64■■■■□ 3.46
CDKN3-207ENST00000543789 GPATCH8Q9UKJ3 1502 aaKnown RBP36.64■■■■□ 3.46
CDKN3-207ENST00000543789 ITSN2Q9NZM3 1697 aa36.63■■■■□ 3.45
CDKN3-207ENST00000543789 SPAG9O60271 1321 aaKnown RBP36.62■■■■□ 3.45
CDKN3-207ENST00000543789 CFDP1Q9UEE9 299 aaPredicted RBP36.61■■■■□ 3.45
CDKN3-207ENST00000543789 CDC42BPAQ5VT25 1732 aa36.59■■■■□ 3.45
CDKN3-207ENST00000543789 CNTLNQ9NXG0 1405 aa36.59■■■■□ 3.45
CDKN3-207ENST00000543789 SETD1BQ9UPS6 1966 aaKnown RBP36.58■■■■□ 3.45
CDKN3-207ENST00000543789 KIDINS220Q9ULH0 1771 aa36.57■■■■□ 3.44
CDKN3-207ENST00000543789 SAMD9LQ8IVG5 1584 aa36.56■■■■□ 3.44
CDKN3-207ENST00000543789 KIAA1107Q9UPP5 1409 aa36.54■■■■□ 3.44
CDKN3-207ENST00000543789 CCNB3Q8WWL7 1395 aa36.53■■■■□ 3.44
CDKN3-207ENST00000543789 SYCP2Q9BX26 1530 aa36.52■■■■□ 3.44
CDKN3-207ENST00000543789 C3P01024 1663 aa36.51■■■■□ 3.43
CDKN3-207ENST00000543789 MTUS2Q5JR59 1369 aa36.51■■■■□ 3.43
CDKN3-207ENST00000543789 PLEKHH2Q8IVE3 1493 aa36.5■■■■□ 3.43
CDKN3-207ENST00000543789 STRCQ7RTU9 1775 aa36.49■■■■□ 3.43
CDKN3-207ENST00000543789 ZMYM3Q14202 1370 aa36.47■■■■□ 3.43
CDKN3-207ENST00000543789 PTPRTO14522 1441 aa36.47■■■■□ 3.43
CDKN3-207ENST00000543789 NPATQ14207 1427 aa36.42■■■■□ 3.42
CDKN3-207ENST00000543789 ATP7AQ04656 1500 aa36.39■■■■□ 3.42
CDKN3-207ENST00000543789 A2MP01023 1474 aa36.38■■■■□ 3.41
CDKN3-207ENST00000543789 GGT6Q6P531 493 aa36.38■■■■□ 3.41
CDKN3-207ENST00000543789 ZNF644Q9H582 1327 aaPredicted RBP36.37■■■■□ 3.41
CDKN3-207ENST00000543789 NCOA1Q15788 1441 aa36.35■■■■□ 3.41
CDKN3-207ENST00000543789 PPP6R1Q9UPN7 881 aa36.33■■■■□ 3.41
CDKN3-207ENST00000543789 INO80Q9ULG1 1556 aaPredicted RBP36.3■■■■□ 3.4
CDKN3-207ENST00000543789 SUPT6HQ7KZ85 1726 aaKnown RBP36.3■■■■□ 3.4
CDKN3-207ENST00000543789 PLXNC1O60486 1568 aa36.28■■■■□ 3.4
CDKN3-207ENST00000543789 MROH2AA6NES4 1674 aa36.28■■■■□ 3.4
CDKN3-207ENST00000543789 MBD5Q9P267 1494 aa36.26■■■■□ 3.4
CDKN3-207ENST00000543789 NCKAP5LQ9HCH0 1330 aa36.25■■■■□ 3.39
CDKN3-207ENST00000543789 CEP162Q5TB80 1403 aa36.25■■■■□ 3.39
CDKN3-207ENST00000543789 EHBP1L1Q8N3D4 1523 aa36.24■■■■□ 3.39
CDKN3-207ENST00000543789 CAMSAP1Q5T5Y3 1602 aa36.23■■■■□ 3.39
CDKN3-207ENST00000543789 PTPRKQ15262 1439 aa36.23■■■■□ 3.39
CDKN3-207ENST00000543789 RTEL1-TNFRSF6BF6WH68 1400 aa36.22■■■■□ 3.39
CDKN3-207ENST00000543789 TIAM1Q13009 1591 aa36.22■■■■□ 3.39
CDKN3-207ENST00000543789 LTBP4Q8N2S1 1624 aa36.19■■■■□ 3.38
CDKN3-207ENST00000543789 PKD2Q13563 968 aa36.19■■■■□ 3.38
CDKN3-207ENST00000543789 DHX29Q7Z478 1369 aaKnown RBP36.18■■■■□ 3.38
CDKN3-207ENST00000543789 CLTCQ00610 1675 aaKnown RBP36.17■■■■□ 3.38
CDKN3-207ENST00000543789 RSPH4AQ5TD94 716 aa36.16■■■■□ 3.38
CDKN3-207ENST00000543789 ADGBQ8N7X0 1667 aa36.11■■■■□ 3.37
CDKN3-207ENST00000543789 KIF3BO15066 747 aa36.11■■■■□ 3.37
CDKN3-207ENST00000543789 PLA2R1Q13018 1463 aa36.11■■■■□ 3.37
CDKN3-207ENST00000543789 IQSEC2Q5JU85 1478 aa36.11■■■■□ 3.37
CDKN3-207ENST00000543789 DISP3Q9P2K9 1392 aa36.09■■■■□ 3.37
CDKN3-207ENST00000543789 ZNF335Q9H4Z2 1342 aaPredicted RBP36.08■■■■□ 3.37
CDKN3-207ENST00000543789 NCOA2Q15596 1464 aa36.08■■■■□ 3.37
CDKN3-207ENST00000543789 CEP170BQ9Y4F5 1589 aaPredicted RBP36.06■■■■□ 3.36
CDKN3-207ENST00000543789 CCDC141Q6ZP82 1450 aa36.05■■■■□ 3.36
CDKN3-207ENST00000543789 MYO3AQ8NEV4 1616 aa36.05■■■■□ 3.36
CDKN3-207ENST00000543789 TCOF1Q13428 1488 aaKnown RBP36.04■■■■□ 3.36
CDKN3-207ENST00000543789 FBXO31Q5XUX0 539 aaPredicted RBP36.02■■■■□ 3.36
CDKN3-207ENST00000543789 CAMSAP2Q08AD1 1489 aa36.01■■■■□ 3.36
CDKN3-207ENST00000543789 TSPY4P0CV99 314 aa36.01■■■■□ 3.36
CDKN3-207ENST00000543789 TSPY10P0CW01 314 aa36.01■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms