RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 FRMPD1Q5SYB0 1578 aa11.47□□□□□ -0.57
NUP43-206ENST00000543637 ARHGAP5Q13017 1502 aa11.47□□□□□ -0.57
NUP43-206ENST00000543637 BCORL1Q5H9F3 1711 aa11.46□□□□□ -0.57
NUP43-206ENST00000543637 PCF11O94913 1555 aaKnown RBP11.46□□□□□ -0.57
NUP43-206ENST00000543637 MAGI2Q86UL8 1455 aa11.46□□□□□ -0.57
NUP43-206ENST00000543637 CDC42BPBQ9Y5S2 1711 aa11.46□□□□□ -0.58
NUP43-206ENST00000543637 ADAMTSL3P82987 1691 aa11.46□□□□□ -0.58
NUP43-206ENST00000543637 ZFYVE16Q7Z3T8 1539 aa11.45□□□□□ -0.58
NUP43-206ENST00000543637 FYCO1Q9BQS8 1478 aa11.45□□□□□ -0.58
NUP43-206ENST00000543637 ZMYM4Q5VZL5 1548 aa11.44□□□□□ -0.58
NUP43-206ENST00000543637 MLECQ14165 292 aa11.43□□□□□ -0.58
NUP43-206ENST00000543637 ZNF777Q9ULD5 760 aaPredicted RBP11.43□□□□□ -0.58
NUP43-206ENST00000543637 ARHGEF40Q8TER5 1519 aa11.43□□□□□ -0.58
NUP43-206ENST00000543637 PLPPR3Q6T4P5 718 aa11.42□□□□□ -0.58
NUP43-206ENST00000543637 PTPRMP28827 1452 aa11.42□□□□□ -0.58
NUP43-206ENST00000543637 ZNF518AQ6AHZ1 1483 aa11.42□□□□□ -0.58
NUP43-206ENST00000543637 HECW2Q9P2P5 1572 aa11.41□□□□□ -0.58
NUP43-206ENST00000543637 CDC42BPAQ5VT25 1732 aa11.41□□□□□ -0.58
NUP43-206ENST00000543637 RIMS1Q86UR5 1692 aaKnown RBP11.41□□□□□ -0.58
NUP43-206ENST00000543637 ATP10AO60312 1499 aa11.41□□□□□ -0.58
NUP43-206ENST00000543637 AFAP1Q8N556 730 aa11.41□□□□□ -0.58
NUP43-206ENST00000543637 PREX2Q70Z35 1606 aa11.41□□□□□ -0.58
NUP43-206ENST00000543637 MADDQ8WXG6 1647 aa11.41□□□□□ -0.58
NUP43-206ENST00000543637 MTUS2Q5JR59 1369 aa11.41□□□□□ -0.58
NUP43-206ENST00000543637 YEATS2Q9ULM3 1422 aa11.4□□□□□ -0.58
NUP43-206ENST00000543637 ESF1Q9H501 851 aaKnown RBP11.39□□□□□ -0.59
NUP43-206ENST00000543637 FER1L4A9Z1Z3 1794 aa11.39□□□□□ -0.59
NUP43-206ENST00000543637 C9orf84Q5VXU9 1444 aa11.38□□□□□ -0.59
NUP43-206ENST00000543637 CFDP1Q9UEE9 299 aaPredicted RBP11.38□□□□□ -0.59
NUP43-206ENST00000543637 CCNB3Q8WWL7 1395 aa11.38□□□□□ -0.59
NUP43-206ENST00000543637 ITSN2Q9NZM3 1697 aa11.37□□□□□ -0.59
NUP43-206ENST00000543637 CEP162Q5TB80 1403 aa11.36□□□□□ -0.59
NUP43-206ENST00000543637 LOC105371045A0A1W2PR82 267 aa11.36□□□□□ -0.59
NUP43-206ENST00000543637 HNRNPMP52272 730 aaKnown RBP eCLIP11.35□□□□□ -0.59
NUP43-206ENST00000543637 KDM5CP41229 1560 aa11.35□□□□□ -0.59
NUP43-206ENST00000543637 MLH3Q9UHC1 1453 aa11.34□□□□□ -0.59
NUP43-206ENST00000543637 SIGLEC1Q9BZZ2 1709 aa11.34□□□□□ -0.59
NUP43-206ENST00000543637 PLEKHH2Q8IVE3 1493 aa11.33□□□□□ -0.6
NUP43-206ENST00000543637 ABCC1P33527 1531 aa11.33□□□□□ -0.6
NUP43-206ENST00000543637 GPATCH8Q9UKJ3 1502 aaKnown RBP11.33□□□□□ -0.6
NUP43-206ENST00000543637 TRAPPC8Q9Y2L5 1435 aa11.33□□□□□ -0.6
NUP43-206ENST00000543637 SPAG9O60271 1321 aaKnown RBP11.33□□□□□ -0.6
NUP43-206ENST00000543637 EHBP1L1Q8N3D4 1523 aa11.31□□□□□ -0.6
NUP43-206ENST00000543637 SETD1BQ9UPS6 1966 aaKnown RBP11.31□□□□□ -0.6
NUP43-206ENST00000543637 APLP2Q06481 763 aa11.31□□□□□ -0.6
NUP43-206ENST00000543637 SAMD9LQ8IVG5 1584 aa11.31□□□□□ -0.6
NUP43-206ENST00000543637 DIP2CQ9Y2E4 1556 aa11.31□□□□□ -0.6
NUP43-206ENST00000543637 SUPT6HQ7KZ85 1726 aaKnown RBP11.31□□□□□ -0.6
NUP43-206ENST00000543637 KIDINS220Q9ULH0 1771 aa11.31□□□□□ -0.6
NUP43-206ENST00000543637 ARHGEF12Q9NZN5 1544 aa11.3□□□□□ -0.6
NUP43-206ENST00000543637 ABCA6Q8N139 1617 aa11.3□□□□□ -0.6
NUP43-206ENST00000543637 REREQ9P2R6 1566 aa11.29□□□□□ -0.6
NUP43-206ENST00000543637 KIAA1107Q9UPP5 1409 aa11.29□□□□□ -0.6
NUP43-206ENST00000543637 CEBPAP49715 358 aaPredicted RBP11.29□□□□□ -0.6
NUP43-206ENST00000543637 SYCP2Q9BX26 1530 aa11.29□□□□□ -0.6
NUP43-206ENST00000543637 RSPH4AQ5TD94 716 aa11.28□□□□□ -0.6
NUP43-206ENST00000543637 PREX1Q8TCU6 1659 aa11.27□□□□□ -0.6
NUP43-206ENST00000543637 AGLP35573 1532 aa11.27□□□□□ -0.61
NUP43-206ENST00000543637 HSPA2P54652 639 aa11.26□□□□□ -0.61
NUP43-206ENST00000543637 ILDR1Q86SU0 546 aaPredicted RBP11.26□□□□□ -0.61
NUP43-206ENST00000543637 VPS8Q8N3P4 1428 aa11.26□□□□□ -0.61
NUP43-206ENST00000543637 LMTK3Q96Q04 1460 aa11.25□□□□□ -0.61
NUP43-206ENST00000543637 ATP7AQ04656 1500 aa11.25□□□□□ -0.61
NUP43-206ENST00000543637 TIAM1Q13009 1591 aa11.25□□□□□ -0.61
NUP43-206ENST00000543637 ADGBQ8N7X0 1667 aa11.25□□□□□ -0.61
NUP43-206ENST00000543637 TSPY4P0CV99 314 aa11.25□□□□□ -0.61
NUP43-206ENST00000543637 TSPY10P0CW01 314 aa11.25□□□□□ -0.61
NUP43-206ENST00000543637 C3P01024 1663 aa11.24□□□□□ -0.61
NUP43-206ENST00000543637 GGT6Q6P531 493 aa11.24□□□□□ -0.61
NUP43-206ENST00000543637 DMRT2Q9Y5R5 561 aa11.24□□□□□ -0.61
NUP43-206ENST00000543637 ZNF644Q9H582 1327 aaPredicted RBP11.24□□□□□ -0.61
NUP43-206ENST00000543637 CNTLNQ9NXG0 1405 aa11.24□□□□□ -0.61
NUP43-206ENST00000543637 UHRF1BP1Q6BDS2 1440 aa11.23□□□□□ -0.61
NUP43-206ENST00000543637 NCOA2Q15596 1464 aa11.23□□□□□ -0.61
NUP43-206ENST00000543637 RTEL1-TNFRSF6BF6WH68 1400 aa11.22□□□□□ -0.61
NUP43-206ENST00000543637 A2MP01023 1474 aa11.22□□□□□ -0.61
NUP43-206ENST00000543637 PPP6R1Q9UPN7 881 aa11.22□□□□□ -0.61
NUP43-206ENST00000543637 INO80Q9ULG1 1556 aaPredicted RBP11.21□□□□□ -0.61
NUP43-206ENST00000543637 MROH2AA6NES4 1674 aa11.2□□□□□ -0.62
NUP43-206ENST00000543637 LRRC9Q6ZRR7 1453 aa11.2□□□□□ -0.62
NUP43-206ENST00000543637 CLTCQ00610 1675 aaKnown RBP11.2□□□□□ -0.62
NUP43-206ENST00000543637 MAP3K1Q13233 1512 aa11.19□□□□□ -0.62
NUP43-206ENST00000543637 ZMYM3Q14202 1370 aa11.19□□□□□ -0.62
NUP43-206ENST00000543637 CAMSAP2Q08AD1 1489 aa11.19□□□□□ -0.62
NUP43-206ENST00000543637 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
NUP43-206ENST00000543637 DHX29Q7Z478 1369 aaKnown RBP11.18□□□□□ -0.62
NUP43-206ENST00000543637 KIF3BO15066 747 aa11.18□□□□□ -0.62
NUP43-206ENST00000543637 KANK4Q5T7N3 995 aaPredicted RBP11.18□□□□□ -0.62
NUP43-206ENST00000543637 FBXO41Q8TF61 875 aa11.18□□□□□ -0.62
NUP43-206ENST00000543637 CCDC141Q6ZP82 1450 aa11.18□□□□□ -0.62
NUP43-206ENST00000543637 ARHGEF5Q12774 1597 aa11.16□□□□□ -0.62
NUP43-206ENST00000543637 NPATQ14207 1427 aa11.15□□□□□ -0.62
NUP43-206ENST00000543637 PLXNC1O60486 1568 aa11.15□□□□□ -0.62
NUP43-206ENST00000543637 WASHC2CQ9Y4E1 1318 aa11.14□□□□□ -0.63
NUP43-206ENST00000543637 MIA2Q96PC5 1412 aa11.14□□□□□ -0.63
NUP43-206ENST00000543637 STRCQ7RTU9 1775 aa11.13□□□□□ -0.63
NUP43-206ENST00000543637 MYOM3Q5VTT5 1437 aa11.13□□□□□ -0.63
NUP43-206ENST00000543637 CERKQ8TCT0 537 aa11.13□□□□□ -0.63
NUP43-206ENST00000543637 MAST1Q9Y2H9 1570 aa11.1□□□□□ -0.63
NUP43-206ENST00000543637 PKD2Q13563 968 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms