RNA–Protein interactions for RNA: ENST00000543199.5

GPN3-203, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5 BASIC

Gene GPN3, Length 1,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-203ENST00000543199 SCAPERQ9BY12 1400 aa21.1■□□□□ 0.97
GPN3-203ENST00000543199 RIMS1Q86UR5 1692 aaKnown RBP21.1■□□□□ 0.97
GPN3-203ENST00000543199 POGZQ7Z3K3 1410 aa21.09■□□□□ 0.97
GPN3-203ENST00000543199 PCF11O94913 1555 aaKnown RBP21.07■□□□□ 0.96
GPN3-203ENST00000543199 PLPPR3Q6T4P5 718 aa21.07■□□□□ 0.96
GPN3-203ENST00000543199 SIGLEC1Q9BZZ2 1709 aa21.07■□□□□ 0.96
GPN3-203ENST00000543199 CDK11AQ9UQ88 783 aaPredicted RBP21.07■□□□□ 0.96
GPN3-203ENST00000543199 MAGI2Q86UL8 1455 aa21.07■□□□□ 0.96
GPN3-203ENST00000543199 KIF14Q15058 1648 aa21.07■□□□□ 0.96
GPN3-203ENST00000543199 MYO5CQ9NQX4 1742 aa21.06■□□□□ 0.96
GPN3-203ENST00000543199 LMTK3Q96Q04 1460 aa21.05■□□□□ 0.96
GPN3-203ENST00000543199 MLECQ14165 292 aa21.04■□□□□ 0.96
GPN3-203ENST00000543199 EFCAB2Q5VUJ9 269 aa21.04■□□□□ 0.96
GPN3-203ENST00000543199 TROQ12816 1431 aaPredicted RBP21.03■□□□□ 0.96
GPN3-203ENST00000543199 LRRIQ1Q96JM4 1722 aa21.01■□□□□ 0.95
GPN3-203ENST00000543199 CLIP1P30622 1438 aa21■□□□□ 0.95
GPN3-203ENST00000543199 ARHGAP5Q13017 1502 aa21■□□□□ 0.95
GPN3-203ENST00000543199 ATP10AO60312 1499 aa20.97■□□□□ 0.95
GPN3-203ENST00000543199 C9orf84Q5VXU9 1444 aa20.97■□□□□ 0.95
GPN3-203ENST00000543199 FER1L4A9Z1Z3 1794 aa20.97■□□□□ 0.95
GPN3-203ENST00000543199 HSPA2P54652 639 aa20.96■□□□□ 0.95
GPN3-203ENST00000543199 ZNF518AQ6AHZ1 1483 aa20.96■□□□□ 0.95
GPN3-203ENST00000543199 AFAP1Q8N556 730 aa20.94■□□□□ 0.94
GPN3-203ENST00000543199 CASKIN1Q8WXD9 1431 aa20.93■□□□□ 0.94
GPN3-203ENST00000543199 MYT1LQ9UL68 1186 aa20.93■□□□□ 0.94
GPN3-203ENST00000543199 ARHGEF12Q9NZN5 1544 aa20.92■□□□□ 0.94
GPN3-203ENST00000543199 FBXO41Q8TF61 875 aa20.92■□□□□ 0.94
GPN3-203ENST00000543199 KDM5CP41229 1560 aa20.92■□□□□ 0.94
GPN3-203ENST00000543199 CCDC18Q5T9S5 1454 aa20.91■□□□□ 0.94
GPN3-203ENST00000543199 CDC42BPBQ9Y5S2 1711 aa20.9■□□□□ 0.94
GPN3-203ENST00000543199 PREX2Q70Z35 1606 aa20.88■□□□□ 0.93
GPN3-203ENST00000543199 DIP2CQ9Y2E4 1556 aa20.87■□□□□ 0.93
GPN3-203ENST00000543199 CEBPAP49715 358 aaPredicted RBP20.86■□□□□ 0.93
GPN3-203ENST00000543199 ABCC1P33527 1531 aa20.85■□□□□ 0.93
GPN3-203ENST00000543199 TRAPPC8Q9Y2L5 1435 aa20.84■□□□□ 0.93
GPN3-203ENST00000543199 FYCO1Q9BQS8 1478 aa20.84■□□□□ 0.93
GPN3-203ENST00000543199 ABCA6Q8N139 1617 aa20.83■□□□□ 0.93
GPN3-203ENST00000543199 MLH3Q9UHC1 1453 aa20.82■□□□□ 0.92
GPN3-203ENST00000543199 ITSN2Q9NZM3 1697 aa20.81■□□□□ 0.92
GPN3-203ENST00000543199 CDC42BPAQ5VT25 1732 aa20.8■□□□□ 0.92
GPN3-203ENST00000543199 REREQ9P2R6 1566 aa20.8■□□□□ 0.92
GPN3-203ENST00000543199 PREX1Q8TCU6 1659 aa20.8■□□□□ 0.92
GPN3-203ENST00000543199 ZNF777Q9ULD5 760 aaPredicted RBP20.78■□□□□ 0.92
GPN3-203ENST00000543199 MSH5O43196 834 aa20.76■□□□□ 0.91
GPN3-203ENST00000543199 KIDINS220Q9ULH0 1771 aa20.75■□□□□ 0.91
GPN3-203ENST00000543199 SAMD9LQ8IVG5 1584 aa20.74■□□□□ 0.91
GPN3-203ENST00000543199 UHRF1BP1Q6BDS2 1440 aa20.74■□□□□ 0.91
GPN3-203ENST00000543199 AGLP35573 1532 aa20.74■□□□□ 0.91
GPN3-203ENST00000543199 ESF1Q9H501 851 aaKnown RBP20.73■□□□□ 0.91
GPN3-203ENST00000543199 SYCP2Q9BX26 1530 aa20.73■□□□□ 0.91
GPN3-203ENST00000543199 GPATCH8Q9UKJ3 1502 aaKnown RBP20.73■□□□□ 0.91
GPN3-203ENST00000543199 C3P01024 1663 aa20.71■□□□□ 0.91
GPN3-203ENST00000543199 HNRNPMP52272 730 aaKnown RBP eCLIP20.69■□□□□ 0.9
GPN3-203ENST00000543199 CERKQ8TCT0 537 aa20.69■□□□□ 0.9
GPN3-203ENST00000543199 CFDP1Q9UEE9 299 aaPredicted RBP20.67■□□□□ 0.9
GPN3-203ENST00000543199 SPAG9O60271 1321 aaKnown RBP20.67■□□□□ 0.9
GPN3-203ENST00000543199 MTUS2Q5JR59 1369 aa20.67■□□□□ 0.9
GPN3-203ENST00000543199 CCNB3Q8WWL7 1395 aa20.67■□□□□ 0.9
GPN3-203ENST00000543199 SETD1BQ9UPS6 1966 aaKnown RBP20.67■□□□□ 0.9
GPN3-203ENST00000543199 STRCQ7RTU9 1775 aa20.66■□□□□ 0.9
GPN3-203ENST00000543199 CNTLNQ9NXG0 1405 aa20.64■□□□□ 0.89
GPN3-203ENST00000543199 KIAA1107Q9UPP5 1409 aa20.63■□□□□ 0.89
GPN3-203ENST00000543199 ATP7AQ04656 1500 aa20.63■□□□□ 0.89
GPN3-203ENST00000543199 DMRT2Q9Y5R5 561 aa20.63■□□□□ 0.89
GPN3-203ENST00000543199 PLEKHH2Q8IVE3 1493 aa20.62■□□□□ 0.89
GPN3-203ENST00000543199 SUPT6HQ7KZ85 1726 aaKnown RBP20.62■□□□□ 0.89
GPN3-203ENST00000543199 INO80Q9ULG1 1556 aaPredicted RBP20.6■□□□□ 0.89
GPN3-203ENST00000543199 TIAM1Q13009 1591 aa20.58■□□□□ 0.88
GPN3-203ENST00000543199 EHBP1L1Q8N3D4 1523 aa20.58■□□□□ 0.88
GPN3-203ENST00000543199 A2MP01023 1474 aa20.58■□□□□ 0.88
GPN3-203ENST00000543199 ZNF644Q9H582 1327 aaPredicted RBP20.57■□□□□ 0.88
GPN3-203ENST00000543199 PLXNC1O60486 1568 aa20.57■□□□□ 0.88
GPN3-203ENST00000543199 CEP162Q5TB80 1403 aa20.57■□□□□ 0.88
GPN3-203ENST00000543199 ZMYM3Q14202 1370 aa20.57■□□□□ 0.88
GPN3-203ENST00000543199 MROH2AA6NES4 1674 aa20.56■□□□□ 0.88
GPN3-203ENST00000543199 NPATQ14207 1427 aa20.54■□□□□ 0.88
GPN3-203ENST00000543199 GGT6Q6P531 493 aa20.54■□□□□ 0.88
GPN3-203ENST00000543199 PTPRTO14522 1441 aa20.53■□□□□ 0.88
GPN3-203ENST00000543199 CLTCQ00610 1675 aaKnown RBP20.53■□□□□ 0.88
GPN3-203ENST00000543199 NCOA1Q15788 1441 aa20.52■□□□□ 0.88
GPN3-203ENST00000543199 MBD5Q9P267 1494 aa20.52■□□□□ 0.87
GPN3-203ENST00000543199 CAMSAP1Q5T5Y3 1602 aa20.5■□□□□ 0.87
GPN3-203ENST00000543199 ADGBQ8N7X0 1667 aa20.49■□□□□ 0.87
GPN3-203ENST00000543199 PTPRKQ15262 1439 aa20.46■□□□□ 0.87
GPN3-203ENST00000543199 MYO3AQ8NEV4 1616 aa20.46■□□□□ 0.87
GPN3-203ENST00000543199 NCOA2Q15596 1464 aa20.46■□□□□ 0.87
GPN3-203ENST00000543199 RTEL1-TNFRSF6BF6WH68 1400 aa20.45■□□□□ 0.86
GPN3-203ENST00000543199 LTBP4Q8N2S1 1624 aa20.44■□□□□ 0.86
GPN3-203ENST00000543199 NCKAP5LQ9HCH0 1330 aa20.44■□□□□ 0.86
GPN3-203ENST00000543199 CAMSAP2Q08AD1 1489 aa20.44■□□□□ 0.86
GPN3-203ENST00000543199 CEP170BQ9Y4F5 1589 aaPredicted RBP20.43■□□□□ 0.86
GPN3-203ENST00000543199 PPP6R1Q9UPN7 881 aa20.42■□□□□ 0.86
GPN3-203ENST00000543199 DHX29Q7Z478 1369 aaKnown RBP20.42■□□□□ 0.86
GPN3-203ENST00000543199 CCDC141Q6ZP82 1450 aa20.42■□□□□ 0.86
GPN3-203ENST00000543199 ZNF142P52746 1687 aaPredicted RBP20.42■□□□□ 0.86
GPN3-203ENST00000543199 KIF3BO15066 747 aa20.39■□□□□ 0.86
GPN3-203ENST00000543199 PLA2R1Q13018 1463 aa20.39■□□□□ 0.85
GPN3-203ENST00000543199 ZNF335Q9H4Z2 1342 aaPredicted RBP20.36■□□□□ 0.85
GPN3-203ENST00000543199 PKD2Q13563 968 aa20.36■□□□□ 0.85
GPN3-203ENST00000543199 TCOF1Q13428 1488 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms