RNA–Protein interactions for RNA: ENST00000543120.5

PTPN6-221, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-221ENST00000543120 ARID4BQ4LE39 1312 aaPredicted RBP26.62■■□□□ 1.85
PTPN6-221ENST00000543120 ARHGAP5Q13017 1502 aa26.61■■□□□ 1.85
PTPN6-221ENST00000543120 YEATS2Q9ULM3 1422 aa26.61■■□□□ 1.85
PTPN6-221ENST00000543120 MYO5CQ9NQX4 1742 aa26.59■■□□□ 1.85
PTPN6-221ENST00000543120 ZMYM4Q5VZL5 1548 aa26.57■■□□□ 1.84
PTPN6-221ENST00000543120 MAGI2Q86UL8 1455 aa26.54■■□□□ 1.84
PTPN6-221ENST00000543120 ARHGEF40Q8TER5 1519 aa26.54■■□□□ 1.84
PTPN6-221ENST00000543120 MTUS2Q5JR59 1369 aa26.52■■□□□ 1.84
PTPN6-221ENST00000543120 ZFYVE16Q7Z3T8 1539 aa26.52■■□□□ 1.84
PTPN6-221ENST00000543120 ARHGEF12Q9NZN5 1544 aa26.52■■□□□ 1.84
PTPN6-221ENST00000543120 GPATCH8Q9UKJ3 1502 aaKnown RBP26.52■■□□□ 1.84
PTPN6-221ENST00000543120 CDC42BPBQ9Y5S2 1711 aa26.51■■□□□ 1.83
PTPN6-221ENST00000543120 ZNF777Q9ULD5 760 aaPredicted RBP26.51■■□□□ 1.83
PTPN6-221ENST00000543120 TRAPPC8Q9Y2L5 1435 aa26.49■■□□□ 1.83
PTPN6-221ENST00000543120 ZNF518AQ6AHZ1 1483 aa26.48■■□□□ 1.83
PTPN6-221ENST00000543120 PREX2Q70Z35 1606 aa26.47■■□□□ 1.83
PTPN6-221ENST00000543120 ADAMTSL3P82987 1691 aa26.47■■□□□ 1.83
PTPN6-221ENST00000543120 CFDP1Q9UEE9 299 aaPredicted RBP26.46■■□□□ 1.83
PTPN6-221ENST00000543120 CCNB3Q8WWL7 1395 aa26.46■■□□□ 1.83
PTPN6-221ENST00000543120 ATP10AO60312 1499 aa26.45■■□□□ 1.82
PTPN6-221ENST00000543120 HNRNPMP52272 730 aaKnown RBP eCLIP26.45■■□□□ 1.82
PTPN6-221ENST00000543120 MYT1LQ9UL68 1186 aa26.45■■□□□ 1.82
PTPN6-221ENST00000543120 MLECQ14165 292 aa26.44■■□□□ 1.82
PTPN6-221ENST00000543120 PTPRMP28827 1452 aa26.43■■□□□ 1.82
PTPN6-221ENST00000543120 SIGLEC1Q9BZZ2 1709 aa26.43■■□□□ 1.82
PTPN6-221ENST00000543120 ABCC1P33527 1531 aa26.43■■□□□ 1.82
PTPN6-221ENST00000543120 BCORL1Q5H9F3 1711 aa26.42■■□□□ 1.82
PTPN6-221ENST00000543120 CDC42BPAQ5VT25 1732 aa26.42■■□□□ 1.82
PTPN6-221ENST00000543120 KDM5CP41229 1560 aa26.41■■□□□ 1.82
PTPN6-221ENST00000543120 VPS8Q8N3P4 1428 aa26.41■■□□□ 1.82
PTPN6-221ENST00000543120 ZNF644Q9H582 1327 aaPredicted RBP26.39■■□□□ 1.82
PTPN6-221ENST00000543120 C9orf84Q5VXU9 1444 aa26.39■■□□□ 1.81
PTPN6-221ENST00000543120 MLH3Q9UHC1 1453 aa26.38■■□□□ 1.81
PTPN6-221ENST00000543120 SAMD9LQ8IVG5 1584 aa26.37■■□□□ 1.81
PTPN6-221ENST00000543120 MADDQ8WXG6 1647 aa26.36■■□□□ 1.81
PTPN6-221ENST00000543120 EHBP1L1Q8N3D4 1523 aa26.35■■□□□ 1.81
PTPN6-221ENST00000543120 KIAA1107Q9UPP5 1409 aa26.33■■□□□ 1.81
PTPN6-221ENST00000543120 KANK4Q5T7N3 995 aaPredicted RBP26.33■■□□□ 1.81
PTPN6-221ENST00000543120 PLPPR3Q6T4P5 718 aa26.32■■□□□ 1.8
PTPN6-221ENST00000543120 SYCP2Q9BX26 1530 aa26.32■■□□□ 1.8
PTPN6-221ENST00000543120 ITSN2Q9NZM3 1697 aa26.31■■□□□ 1.8
PTPN6-221ENST00000543120 TIAM1Q13009 1591 aa26.31■■□□□ 1.8
PTPN6-221ENST00000543120 HECW2Q9P2P5 1572 aa26.31■■□□□ 1.8
PTPN6-221ENST00000543120 DIP2CQ9Y2E4 1556 aa26.3■■□□□ 1.8
PTPN6-221ENST00000543120 SPAG9O60271 1321 aaKnown RBP26.3■■□□□ 1.8
PTPN6-221ENST00000543120 NCOA2Q15596 1464 aa26.3■■□□□ 1.8
PTPN6-221ENST00000543120 ABCA6Q8N139 1617 aa26.26■■□□□ 1.79
PTPN6-221ENST00000543120 LRRC9Q6ZRR7 1453 aa26.26■■□□□ 1.79
PTPN6-221ENST00000543120 PLEKHH2Q8IVE3 1493 aa26.26■■□□□ 1.79
PTPN6-221ENST00000543120 RIMS1Q86UR5 1692 aaKnown RBP26.25■■□□□ 1.79
PTPN6-221ENST00000543120 MBD5Q9P267 1494 aa26.23■■□□□ 1.79
PTPN6-221ENST00000543120 KIDINS220Q9ULH0 1771 aa26.23■■□□□ 1.79
PTPN6-221ENST00000543120 CEBPAP49715 358 aaPredicted RBP26.23■■□□□ 1.79
PTPN6-221ENST00000543120 REREQ9P2R6 1566 aa26.2■■□□□ 1.79
PTPN6-221ENST00000543120 MAP3K1Q13233 1512 aa26.19■■□□□ 1.78
PTPN6-221ENST00000543120 SUPT6HQ7KZ85 1726 aaKnown RBP26.17■■□□□ 1.78
PTPN6-221ENST00000543120 AGLP35573 1532 aa26.17■■□□□ 1.78
PTPN6-221ENST00000543120 ATP7AQ04656 1500 aa26.14■■□□□ 1.77
PTPN6-221ENST00000543120 LMTK3Q96Q04 1460 aa26.12■■□□□ 1.77
PTPN6-221ENST00000543120 CAMSAP2Q08AD1 1489 aa26.11■■□□□ 1.77
PTPN6-221ENST00000543120 FER1L4A9Z1Z3 1794 aa26.11■■□□□ 1.77
PTPN6-221ENST00000543120 APLP2Q06481 763 aa26.11■■□□□ 1.77
PTPN6-221ENST00000543120 HSPA2P54652 639 aa26.1■■□□□ 1.77
PTPN6-221ENST00000543120 RSPH4AQ5TD94 716 aa26.1■■□□□ 1.77
PTPN6-221ENST00000543120 INO80Q9ULG1 1556 aaPredicted RBP26.1■■□□□ 1.77
PTPN6-221ENST00000543120 A2MP01023 1474 aa26.1■■□□□ 1.77
PTPN6-221ENST00000543120 RTEL1-TNFRSF6BF6WH68 1400 aa26.08■■□□□ 1.77
PTPN6-221ENST00000543120 ESF1Q9H501 851 aaKnown RBP26.07■■□□□ 1.76
PTPN6-221ENST00000543120 CCDC141Q6ZP82 1450 aa26.04■■□□□ 1.76
PTPN6-221ENST00000543120 GGT6Q6P531 493 aa26.04■■□□□ 1.76
PTPN6-221ENST00000543120 MYOM3Q5VTT5 1437 aa26.04■■□□□ 1.76
PTPN6-221ENST00000543120 TSPY4P0CV99 314 aa26.02■■□□□ 1.76
PTPN6-221ENST00000543120 TSPY10P0CW01 314 aa26.02■■□□□ 1.76
PTPN6-221ENST00000543120 DHX29Q7Z478 1369 aaKnown RBP26.02■■□□□ 1.76
PTPN6-221ENST00000543120 PLXNC1O60486 1568 aa26.02■■□□□ 1.76
PTPN6-221ENST00000543120 MIA2Q96PC5 1412 aa26■■□□□ 1.75
PTPN6-221ENST00000543120 ZMYM3Q14202 1370 aa25.98■■□□□ 1.75
PTPN6-221ENST00000543120 CNTLNQ9NXG0 1405 aa25.97■■□□□ 1.75
PTPN6-221ENST00000543120 ARHGEF5Q12774 1597 aa25.96■■□□□ 1.75
PTPN6-221ENST00000543120 KIF3BO15066 747 aa25.95■■□□□ 1.74
PTPN6-221ENST00000543120 PPP6R1Q9UPN7 881 aa25.93■■□□□ 1.74
PTPN6-221ENST00000543120 C3P01024 1663 aa25.91■■□□□ 1.74
PTPN6-221ENST00000543120 ADGBQ8N7X0 1667 aa25.91■■□□□ 1.74
PTPN6-221ENST00000543120 UHRF1BP1Q6BDS2 1440 aa25.88■■□□□ 1.73
PTPN6-221ENST00000543120 ABCC5O15440 1437 aa25.86■■□□□ 1.73
PTPN6-221ENST00000543120 FGD6Q6ZV73 1430 aa25.85■■□□□ 1.73
PTPN6-221ENST00000543120 ILDR1Q86SU0 546 aaPredicted RBP25.84■■□□□ 1.73
PTPN6-221ENST00000543120 PREX1Q8TCU6 1659 aa25.83■■□□□ 1.73
PTPN6-221ENST00000543120 NPATQ14207 1427 aa25.82■■□□□ 1.72
PTPN6-221ENST00000543120 PTPRKQ15262 1439 aa25.82■■□□□ 1.72
PTPN6-221ENST00000543120 CLTCQ00610 1675 aaKnown RBP25.82■■□□□ 1.72
PTPN6-221ENST00000543120 MAST1Q9Y2H9 1570 aa25.82■■□□□ 1.72
PTPN6-221ENST00000543120 PTPN23Q9H3S7 1636 aa25.81■■□□□ 1.72
PTPN6-221ENST00000543120 RRP7BPQ9NSQ0 103 aa25.81■■□□□ 1.72
PTPN6-221ENST00000543120 SETD1BQ9UPS6 1966 aaKnown RBP25.8■■□□□ 1.72
PTPN6-221ENST00000543120 TCOF1Q13428 1488 aaKnown RBP25.8■■□□□ 1.72
PTPN6-221ENST00000543120 WASHC2CQ9Y4E1 1318 aa25.8■■□□□ 1.72
PTPN6-221ENST00000543120 MROH2AA6NES4 1674 aa25.8■■□□□ 1.72
PTPN6-221ENST00000543120 FBXO31Q5XUX0 539 aaPredicted RBP25.79■■□□□ 1.72
PTPN6-221ENST00000543120 PPARGC1BQ86YN6 1023 aaKnown RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms