RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 PREX2Q70Z35 1606 aa26.14■■□□□ 1.77
GTDC1-219ENST00000542155 ABCA9Q8IUA7 1624 aa26.13■■□□□ 1.77
GTDC1-219ENST00000542155 MYO5CQ9NQX4 1742 aa26.12■■□□□ 1.77
GTDC1-219ENST00000542155 PLCH2O75038 1416 aa26.1■■□□□ 1.77
GTDC1-219ENST00000542155 PTPRKQ15262 1439 aa26.1■■□□□ 1.77
GTDC1-219ENST00000542155 CAMSAP2Q08AD1 1489 aa26.1■■□□□ 1.77
GTDC1-219ENST00000542155 ARHGAP5Q13017 1502 aa26.07■■□□□ 1.76
GTDC1-219ENST00000542155 SAMD9LQ8IVG5 1584 aa26.05■■□□□ 1.76
GTDC1-219ENST00000542155 HNRNPMP52272 730 aaKnown RBP eCLIP26.01■■□□□ 1.76
GTDC1-219ENST00000542155 CD109Q6YHK3 1445 aa26.01■■□□□ 1.75
GTDC1-219ENST00000542155 DIP2BQ9P265 1576 aa26■■□□□ 1.75
GTDC1-219ENST00000542155 FAM69CQ0P6D2 419 aa26■■□□□ 1.75
GTDC1-219ENST00000542155 ABCC5O15440 1437 aa26■■□□□ 1.75
GTDC1-219ENST00000542155 EFCAB2Q5VUJ9 269 aa26■■□□□ 1.75
GTDC1-219ENST00000542155 CHIC2Q9UKJ5 165 aa25.99■■□□□ 1.75
GTDC1-219ENST00000542155 DAPK1P53355 1430 aa25.98■■□□□ 1.75
GTDC1-219ENST00000542155 DNMT1P26358 1616 aaKnown RBP25.97■■□□□ 1.75
GTDC1-219ENST00000542155 MBD5Q9P267 1494 aa25.97■■□□□ 1.75
GTDC1-219ENST00000542155 ARAP3Q8WWN8 1544 aa25.97■■□□□ 1.75
GTDC1-219ENST00000542155 ARHGEF12Q9NZN5 1544 aa25.96■■□□□ 1.75
GTDC1-219ENST00000542155 GLI2P10070 1586 aa25.96■■□□□ 1.75
GTDC1-219ENST00000542155 FANCAO15360 1455 aa25.95■■□□□ 1.75
GTDC1-219ENST00000542155 MAP3K4Q9Y6R4 1608 aa25.94■■□□□ 1.74
GTDC1-219ENST00000542155 SYCP2Q9BX26 1530 aa25.94■■□□□ 1.74
GTDC1-219ENST00000542155 KIF13AQ9H1H9 1805 aa25.91■■□□□ 1.74
GTDC1-219ENST00000542155 ABCC1P33527 1531 aa25.89■■□□□ 1.74
GTDC1-219ENST00000542155 KIAA1107Q9UPP5 1409 aa25.89■■□□□ 1.73
GTDC1-219ENST00000542155 RRP7BPQ9NSQ0 103 aa25.88■■□□□ 1.73
GTDC1-219ENST00000542155 ARHGEF5Q12774 1597 aa25.87■■□□□ 1.73
GTDC1-219ENST00000542155 TRAPPC8Q9Y2L5 1435 aa25.87■■□□□ 1.73
GTDC1-219ENST00000542155 TSPOAP1O95153 1857 aa25.86■■□□□ 1.73
GTDC1-219ENST00000542155 CROCC2H7BZ55 1655 aa25.86■■□□□ 1.73
GTDC1-219ENST00000542155 AKNAQ7Z591 1439 aa25.86■■□□□ 1.73
GTDC1-219ENST00000542155 PLEKHH2Q8IVE3 1493 aa25.85■■□□□ 1.73
GTDC1-219ENST00000542155 CCDC141Q6ZP82 1450 aa25.83■■□□□ 1.73
GTDC1-219ENST00000542155 AFAP1Q8N556 730 aa25.83■■□□□ 1.73
GTDC1-219ENST00000542155 ADGRL1O94910 1474 aa25.83■■□□□ 1.73
GTDC1-219ENST00000542155 PPRC1Q5VV67 1664 aaKnown RBP25.83■■□□□ 1.72
GTDC1-219ENST00000542155 SCAPERQ9BY12 1400 aa25.82■■□□□ 1.72
GTDC1-219ENST00000542155 NAIPQ13075 1403 aa25.82■■□□□ 1.72
GTDC1-219ENST00000542155 SETD5Q9C0A6 1442 aa25.82■■□□□ 1.72
GTDC1-219ENST00000542155 RAB3GAP2Q9H2M9 1393 aa25.81■■□□□ 1.72
GTDC1-219ENST00000542155 HFM1A2PYH4 1435 aa25.81■■□□□ 1.72
GTDC1-219ENST00000542155 C9orf84Q5VXU9 1444 aa25.8■■□□□ 1.72
GTDC1-219ENST00000542155 TSPY4P0CV99 314 aa25.8■■□□□ 1.72
GTDC1-219ENST00000542155 TSPY10P0CW01 314 aa25.8■■□□□ 1.72
GTDC1-219ENST00000542155 RSPH4AQ5TD94 716 aa25.8■■□□□ 1.72
GTDC1-219ENST00000542155 NCOA1Q15788 1441 aa25.78■■□□□ 1.72
GTDC1-219ENST00000542155 ROCK1Q13464 1354 aa25.78■■□□□ 1.72
GTDC1-219ENST00000542155 SHANK2Q9UPX8 1470 aa25.77■■□□□ 1.72
GTDC1-219ENST00000542155 NEO1Q92859 1461 aa25.76■■□□□ 1.71
GTDC1-219ENST00000542155 KDM6BO15054 1643 aa25.75■■□□□ 1.71
GTDC1-219ENST00000542155 CFAP74Q9C0B2 1584 aa25.75■■□□□ 1.71
GTDC1-219ENST00000542155 ADGRL2O95490 1459 aa25.75■■□□□ 1.71
GTDC1-219ENST00000542155 ADGBQ8N7X0 1667 aa25.74■■□□□ 1.71
GTDC1-219ENST00000542155 GCC2Q8IWJ2 1684 aa25.71■■□□□ 1.71
GTDC1-219ENST00000542155 RAPGEF3O95398 923 aa25.71■■□□□ 1.71
GTDC1-219ENST00000542155 ANKRD30AQ9BXX3 1397 aa25.71■■□□□ 1.71
GTDC1-219ENST00000542155 TRHP20396 242 aaPredicted RBP25.71■■□□□ 1.71
GTDC1-219ENST00000542155 MAST1Q9Y2H9 1570 aa25.7■■□□□ 1.7
GTDC1-219ENST00000542155 SPAG9O60271 1321 aaKnown RBP25.68■■□□□ 1.7
GTDC1-219ENST00000542155 POGZQ7Z3K3 1410 aa25.67■■□□□ 1.7
GTDC1-219ENST00000542155 KIF15Q9NS87 1388 aa25.65■■□□□ 1.7
GTDC1-219ENST00000542155 TEX14Q8IWB6 1497 aa25.65■■□□□ 1.7
GTDC1-219ENST00000542155 ZNF518AQ6AHZ1 1483 aa25.65■■□□□ 1.7
GTDC1-219ENST00000542155 DENND4BO75064 1496 aaPredicted RBP25.64■■□□□ 1.69
GTDC1-219ENST00000542155 ZFYVE16Q7Z3T8 1539 aa25.64■■□□□ 1.69
GTDC1-219ENST00000542155 HRCP23327 699 aa25.62■■□□□ 1.69
GTDC1-219ENST00000542155 COL17A1Q9UMD9 1497 aaPredicted RBP25.62■■□□□ 1.69
GTDC1-219ENST00000542155 CCER1Q8TC90 406 aaPredicted RBP25.61■■□□□ 1.69
GTDC1-219ENST00000542155 KDM5CP41229 1560 aa25.61■■□□□ 1.69
GTDC1-219ENST00000542155 INO80Q9ULG1 1556 aaPredicted RBP25.61■■□□□ 1.69
GTDC1-219ENST00000542155 RICTORQ6R327 1708 aa25.61■■□□□ 1.69
GTDC1-219ENST00000542155 RTEL1-TNFRSF6BF6WH68 1400 aa25.61■■□□□ 1.69
GTDC1-219ENST00000542155 PLXNC1O60486 1568 aa25.6■■□□□ 1.69
GTDC1-219ENST00000542155 ATP7AQ04656 1500 aa25.6■■□□□ 1.69
GTDC1-219ENST00000542155 DHX57Q6P158 1386 aaKnown RBP25.6■■□□□ 1.69
GTDC1-219ENST00000542155 ANKRD50Q9ULJ7 1429 aa25.6■■□□□ 1.69
GTDC1-219ENST00000542155 KIDINS220Q9ULH0 1771 aa25.6■■□□□ 1.69
GTDC1-219ENST00000542155 FRMPD1Q5SYB0 1578 aa25.59■■□□□ 1.69
GTDC1-219ENST00000542155 MYT1LQ9UL68 1186 aa25.59■■□□□ 1.69
GTDC1-219ENST00000542155 MLH3Q9UHC1 1453 aa25.54■■□□□ 1.68
GTDC1-219ENST00000542155 HECW2Q9P2P5 1572 aa25.52■■□□□ 1.68
GTDC1-219ENST00000542155 TRIM52Q96A61 297 aa25.52■■□□□ 1.68
GTDC1-219ENST00000542155 DUOX2Q9NRD8 1548 aa25.51■■□□□ 1.67
GTDC1-219ENST00000542155 YEATS2Q9ULM3 1422 aa25.49■■□□□ 1.67
GTDC1-219ENST00000542155 ABCA6Q8N139 1617 aa25.48■■□□□ 1.67
GTDC1-219ENST00000542155 ZMYM4Q5VZL5 1548 aa25.44■■□□□ 1.66
GTDC1-219ENST00000542155 DHX29Q7Z478 1369 aaKnown RBP25.44■■□□□ 1.66
GTDC1-219ENST00000542155 ERBINQ96RT1 1412 aa25.44■■□□□ 1.66
GTDC1-219ENST00000542155 DIP2CQ9Y2E4 1556 aa25.42■■□□□ 1.66
GTDC1-219ENST00000542155 MPHOSPH9Q99550 1183 aa25.41■■□□□ 1.66
GTDC1-219ENST00000542155 A2MP01023 1474 aa25.4■■□□□ 1.66
GTDC1-219ENST00000542155 PZPP20742 1482 aa25.4■■□□□ 1.66
GTDC1-219ENST00000542155 NUP155O75694 1391 aa25.4■■□□□ 1.66
GTDC1-219ENST00000542155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.39■■□□□ 1.65
GTDC1-219ENST00000542155 KIF3BO15066 747 aa25.38■■□□□ 1.65
GTDC1-219ENST00000542155 FOXD1Q16676 465 aa25.38■■□□□ 1.65
GTDC1-219ENST00000542155 SLC4A1APQ9BWU0 796 aaKnown RBP25.35■■□□□ 1.65
GTDC1-219ENST00000542155 MAGI2Q86UL8 1455 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms