RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 ARHGAP35Q9NRY4 1499 aa7.99□□□□□ -1.13
SPARCL1-209ENST00000541496 PAK3O75914 559 aaPredicted RBP7.97□□□□□ -1.13
SPARCL1-209ENST00000541496 ARHGEF11O15085 1522 aa7.97□□□□□ -1.13
SPARCL1-209ENST00000541496 SAMD9Q5K651 1589 aa7.97□□□□□ -1.13
SPARCL1-209ENST00000541496 PTPRGP23470 1445 aa7.96□□□□□ -1.13
SPARCL1-209ENST00000541496 CTTNBP2Q8WZ74 1663 aa7.96□□□□□ -1.13
SPARCL1-209ENST00000541496 KIAA0556O60303 1618 aa7.96□□□□□ -1.14
SPARCL1-209ENST00000541496 FHOD3Q2V2M9 1422 aa7.95□□□□□ -1.14
SPARCL1-209ENST00000541496 ARAP1Q96P48 1450 aa7.95□□□□□ -1.14
SPARCL1-209ENST00000541496 RANGAP1P46060 587 aaPredicted RBP7.95□□□□□ -1.14
SPARCL1-209ENST00000541496 FMN1Q68DA7 1419 aa7.95□□□□□ -1.14
SPARCL1-209ENST00000541496 ERCC6L2Q5T890 1561 aa7.94□□□□□ -1.14
SPARCL1-209ENST00000541496 P3H3Q8IVL6 736 aa7.94□□□□□ -1.14
SPARCL1-209ENST00000541496 ZNF579Q8NAF0 562 aaKnown RBP7.94□□□□□ -1.14
SPARCL1-209ENST00000541496 CLCN6P51797 869 aa7.93□□□□□ -1.14
SPARCL1-209ENST00000541496 KLHL34Q8N239 644 aa7.92□□□□□ -1.14
SPARCL1-209ENST00000541496 DCBLD2Q96PD2 775 aa7.92□□□□□ -1.14
SPARCL1-209ENST00000541496 UACAQ9BZF9 1416 aa7.92□□□□□ -1.14
SPARCL1-209ENST00000541496 VPS8Q8N3P4 1428 aa7.91□□□□□ -1.14
SPARCL1-209ENST00000541496 UHRF1BP1LA0JNW5 1464 aa7.91□□□□□ -1.14
SPARCL1-209ENST00000541496 PLB1Q6P1J6 1458 aa7.9□□□□□ -1.14
SPARCL1-209ENST00000541496 CASKIN1Q8WXD9 1431 aa7.9□□□□□ -1.14
SPARCL1-209ENST00000541496 POTEIP0CG38 1075 aa7.9□□□□□ -1.14
SPARCL1-209ENST00000541496 CYB5RLQ6IPT4 315 aa7.9□□□□□ -1.14
SPARCL1-209ENST00000541496 RIMBP3CA6NJZ7 1639 aa7.89□□□□□ -1.15
SPARCL1-209ENST00000541496 RIMBP3BA6NNM3 1639 aa7.89□□□□□ -1.15
SPARCL1-209ENST00000541496 RIMBP3Q9UFD9 1639 aa7.89□□□□□ -1.15
SPARCL1-209ENST00000541496 LHX8Q68G74 356 aa7.89□□□□□ -1.15
SPARCL1-209ENST00000541496 PHF12Q96QT6 1004 aa7.89□□□□□ -1.15
SPARCL1-209ENST00000541496 ABCA8O94911 1581 aa7.88□□□□□ -1.15
SPARCL1-209ENST00000541496 ABCC2Q92887 1545 aa7.88□□□□□ -1.15
SPARCL1-209ENST00000541496 NUP153P49790 1475 aaKnown RBP7.87□□□□□ -1.15
SPARCL1-209ENST00000541496 FYCO1Q9BQS8 1478 aa7.87□□□□□ -1.15
SPARCL1-209ENST00000541496 GALR2O43603 387 aaPredicted RBP7.87□□□□□ -1.15
SPARCL1-209ENST00000541496 NUBP1P53384 320 aa7.87□□□□□ -1.15
SPARCL1-209ENST00000541496 IFNLR1Q8IU57 520 aaPredicted RBP7.87□□□□□ -1.15
SPARCL1-209ENST00000541496 FAM212AQ96EL1 285 aa7.87□□□□□ -1.15
SPARCL1-209ENST00000541496 TTBK1Q5TCY1 1321 aaPredicted RBP7.86□□□□□ -1.15
SPARCL1-209ENST00000541496 SPOCK2Q92563 424 aa7.86□□□□□ -1.15
SPARCL1-209ENST00000541496 KDM5BQ9UGL1 1544 aa7.86□□□□□ -1.15
SPARCL1-209ENST00000541496 ATP10BO94823 1461 aa7.85□□□□□ -1.15
SPARCL1-209ENST00000541496 EPRSP07814 1512 aaKnown RBP7.84□□□□□ -1.15
SPARCL1-209ENST00000541496 CCDC18Q5T9S5 1454 aa7.84□□□□□ -1.15
SPARCL1-209ENST00000541496 RASEFQ8IZ41 740 aa7.84□□□□□ -1.15
SPARCL1-209ENST00000541496 MAP3K1Q13233 1512 aa7.83□□□□□ -1.16
SPARCL1-209ENST00000541496 RAPGEF6Q8TEU7 1601 aa7.83□□□□□ -1.16
SPARCL1-209ENST00000541496 GSE1Q14687 1217 aa7.83□□□□□ -1.16
SPARCL1-209ENST00000541496 TSPYL2Q9H2G4 693 aaPredicted RBP7.83□□□□□ -1.16
SPARCL1-209ENST00000541496 CDK11AQ9UQ88 783 aaPredicted RBP7.83□□□□□ -1.16
SPARCL1-209ENST00000541496 PCF11O94913 1555 aaKnown RBP7.83□□□□□ -1.16
SPARCL1-209ENST00000541496 HECW1Q76N89 1606 aa7.82□□□□□ -1.16
SPARCL1-209ENST00000541496 ADCY10Q96PN6 1610 aa7.82□□□□□ -1.16
SPARCL1-209ENST00000541496 ATP1B4Q9UN42 357 aaPredicted RBP7.82□□□□□ -1.16
SPARCL1-209ENST00000541496 CCDC61Q9Y6R9 512 aa7.81□□□□□ -1.16
SPARCL1-209ENST00000541496 PLEKHD1A6NEE1 506 aa7.8□□□□□ -1.16
SPARCL1-209ENST00000541496 TROQ12816 1431 aaPredicted RBP7.79□□□□□ -1.16
SPARCL1-209ENST00000541496 ASXL2Q76L83 1435 aa7.79□□□□□ -1.16
SPARCL1-209ENST00000541496 MAPKBP1O60336 1514 aa7.79□□□□□ -1.16
SPARCL1-209ENST00000541496 CDK13Q14004 1512 aaKnown RBP7.79□□□□□ -1.16
SPARCL1-209ENST00000541496 ARID3CA6NKF2 412 aa7.79□□□□□ -1.16
SPARCL1-209ENST00000541496 DCAF8Q5TAQ9 597 aa7.79□□□□□ -1.16
SPARCL1-209ENST00000541496 WDR7Q9Y4E6 1490 aa7.78□□□□□ -1.16
SPARCL1-209ENST00000541496 TIAM1Q13009 1591 aa7.77□□□□□ -1.17
SPARCL1-209ENST00000541496 LRRC9Q6ZRR7 1453 aa7.77□□□□□ -1.17
SPARCL1-209ENST00000541496 MTUS2Q5JR59 1369 aa7.77□□□□□ -1.17
SPARCL1-209ENST00000541496 KANK4Q5T7N3 995 aaPredicted RBP7.77□□□□□ -1.17
SPARCL1-209ENST00000541496 MS4A3Q96HJ5 214 aa7.76□□□□□ -1.17
SPARCL1-209ENST00000541496 SGIP1Q9BQI5 828 aa7.76□□□□□ -1.17
SPARCL1-209ENST00000541496 ABCC10Q5T3U5 1492 aa7.75□□□□□ -1.17
SPARCL1-209ENST00000541496 ZCCHC11Q5TAX3 1644 aaKnown RBP7.75□□□□□ -1.17
SPARCL1-209ENST00000541496 MAGI3Q5TCQ9 1506 aa7.75□□□□□ -1.17
SPARCL1-209ENST00000541496 EHBP1L1Q8N3D4 1523 aa7.74□□□□□ -1.17
SPARCL1-209ENST00000541496 KIF12Q96FN5 646 aa7.74□□□□□ -1.17
SPARCL1-209ENST00000541496 KCNH8Q96L42 1107 aa7.72□□□□□ -1.17
SPARCL1-209ENST00000541496 CIZ1Q9ULV3 898 aaPredicted RBP7.72□□□□□ -1.17
SPARCL1-209ENST00000541496 CFAP43Q8NDM7 1665 aa7.72□□□□□ -1.17
SPARCL1-209ENST00000541496 GLI2P10070 1586 aa7.71□□□□□ -1.17
SPARCL1-209ENST00000541496 NCOA2Q15596 1464 aa7.71□□□□□ -1.18
SPARCL1-209ENST00000541496 CHRM1P11229 460 aaPredicted RBP7.71□□□□□ -1.18
SPARCL1-209ENST00000541496 FAM69CQ0P6D2 419 aa7.71□□□□□ -1.18
SPARCL1-209ENST00000541496 PLCH2O75038 1416 aa7.7□□□□□ -1.18
SPARCL1-209ENST00000541496 PELP1Q8IZL8 1130 aaKnown RBP7.7□□□□□ -1.18
SPARCL1-209ENST00000541496 CCNB3Q8WWL7 1395 aa7.7□□□□□ -1.18
SPARCL1-209ENST00000541496 CD109Q6YHK3 1445 aa7.69□□□□□ -1.18
SPARCL1-209ENST00000541496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.69□□□□□ -1.18
SPARCL1-209ENST00000541496 ARAP3Q8WWN8 1544 aa7.69□□□□□ -1.18
SPARCL1-209ENST00000541496 GPATCH8Q9UKJ3 1502 aaKnown RBP7.69□□□□□ -1.18
SPARCL1-209ENST00000541496 MAP3K13O43283 966 aa7.69□□□□□ -1.18
SPARCL1-209ENST00000541496 KIF14Q15058 1648 aa7.69□□□□□ -1.18
SPARCL1-209ENST00000541496 PHLDB1Q86UU1 1377 aa7.69□□□□□ -1.18
SPARCL1-209ENST00000541496 LRRIQ1Q96JM4 1722 aa7.69□□□□□ -1.18
SPARCL1-209ENST00000541496 MYOM3Q5VTT5 1437 aa7.69□□□□□ -1.18
SPARCL1-209ENST00000541496 MIA2Q96PC5 1412 aa7.69□□□□□ -1.18
SPARCL1-209ENST00000541496 DIP2BQ9P265 1576 aa7.68□□□□□ -1.18
SPARCL1-209ENST00000541496 CFDP1Q9UEE9 299 aaPredicted RBP7.68□□□□□ -1.18
SPARCL1-209ENST00000541496 PCDHB13Q9Y5F0 798 aa7.68□□□□□ -1.18
SPARCL1-209ENST00000541496 ABCA9Q8IUA7 1624 aa7.67□□□□□ -1.18
SPARCL1-209ENST00000541496 ATMINO43313 823 aaPredicted RBP7.67□□□□□ -1.18
SPARCL1-209ENST00000541496 PYGBP11216 843 aa7.67□□□□□ -1.18
SPARCL1-209ENST00000541496 EFCAB2Q5VUJ9 269 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms