RNA–Protein interactions for RNA: ENST00000541372.1

SLC3A2-216, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 269 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-216ENST00000541372 MAP3K1Q13233 1512 aa24.2■■□□□ 1.47
SLC3A2-216ENST00000541372 ADGRL1O94910 1474 aa24.2■■□□□ 1.47
SLC3A2-216ENST00000541372 ZNF777Q9ULD5 760 aaPredicted RBP24.2■■□□□ 1.46
SLC3A2-216ENST00000541372 TIAM1Q13009 1591 aa24.18■■□□□ 1.46
SLC3A2-216ENST00000541372 CFAP74Q9C0B2 1584 aa24.17■■□□□ 1.46
SLC3A2-216ENST00000541372 EHBP1L1Q8N3D4 1523 aa24.17■■□□□ 1.46
SLC3A2-216ENST00000541372 AFAP1Q8N556 730 aa24.17■■□□□ 1.46
SLC3A2-216ENST00000541372 LRRC9Q6ZRR7 1453 aa24.17■■□□□ 1.46
SLC3A2-216ENST00000541372 MYO5CQ9NQX4 1742 aa24.16■■□□□ 1.46
SLC3A2-216ENST00000541372 POGZQ7Z3K3 1410 aa24.12■■□□□ 1.45
SLC3A2-216ENST00000541372 KDM4FA0A1W2PPD8 638 aa24.12■■□□□ 1.45
SLC3A2-216ENST00000541372 HNRNPMP52272 730 aaKnown RBP eCLIP24.12■■□□□ 1.45
SLC3A2-216ENST00000541372 NCOA2Q15596 1464 aa24.12■■□□□ 1.45
SLC3A2-216ENST00000541372 CDC42BPBQ9Y5S2 1711 aa24.1■■□□□ 1.45
SLC3A2-216ENST00000541372 FRMPD1Q5SYB0 1578 aa24.1■■□□□ 1.45
SLC3A2-216ENST00000541372 ZNF644Q9H582 1327 aaPredicted RBP24.1■■□□□ 1.45
SLC3A2-216ENST00000541372 PREX2Q70Z35 1606 aa24.09■■□□□ 1.45
SLC3A2-216ENST00000541372 ARHGEF12Q9NZN5 1544 aa24.09■■□□□ 1.45
SLC3A2-216ENST00000541372 TRAPPC8Q9Y2L5 1435 aa24.07■■□□□ 1.44
SLC3A2-216ENST00000541372 KIAA1107Q9UPP5 1409 aa24.06■■□□□ 1.44
SLC3A2-216ENST00000541372 CDC42BPAQ5VT25 1732 aa24.06■■□□□ 1.44
SLC3A2-216ENST00000541372 MAGI2Q86UL8 1455 aa24.06■■□□□ 1.44
SLC3A2-216ENST00000541372 ZNF518AQ6AHZ1 1483 aa24.05■■□□□ 1.44
SLC3A2-216ENST00000541372 AEBP2Q6ZN18 517 aaPredicted RBP24.04■■□□□ 1.44
SLC3A2-216ENST00000541372 MYT1LQ9UL68 1186 aa24.04■■□□□ 1.44
SLC3A2-216ENST00000541372 RICTORQ6R327 1708 aa24.04■■□□□ 1.44
SLC3A2-216ENST00000541372 YEATS2Q9ULM3 1422 aa24.02■■□□□ 1.44
SLC3A2-216ENST00000541372 PLEKHH2Q8IVE3 1493 aa24.02■■□□□ 1.44
SLC3A2-216ENST00000541372 SUPT6HQ7KZ85 1726 aaKnown RBP24.01■■□□□ 1.43
SLC3A2-216ENST00000541372 ABCC1P33527 1531 aa24.01■■□□□ 1.43
SLC3A2-216ENST00000541372 ZMYM4Q5VZL5 1548 aa24.01■■□□□ 1.43
SLC3A2-216ENST00000541372 ARID4BQ4LE39 1312 aaPredicted RBP24■■□□□ 1.43
SLC3A2-216ENST00000541372 SAMD9LQ8IVG5 1584 aa23.99■■□□□ 1.43
SLC3A2-216ENST00000541372 RSPH4AQ5TD94 716 aa23.98■■□□□ 1.43
SLC3A2-216ENST00000541372 SPAG9O60271 1321 aaKnown RBP23.97■■□□□ 1.43
SLC3A2-216ENST00000541372 MLH3Q9UHC1 1453 aa23.97■■□□□ 1.43
SLC3A2-216ENST00000541372 ZFYVE16Q7Z3T8 1539 aa23.96■■□□□ 1.43
SLC3A2-216ENST00000541372 ATP10AO60312 1499 aa23.95■■□□□ 1.42
SLC3A2-216ENST00000541372 MBD5Q9P267 1494 aa23.95■■□□□ 1.42
SLC3A2-216ENST00000541372 KDM5CP41229 1560 aa23.95■■□□□ 1.42
SLC3A2-216ENST00000541372 SYCP2Q9BX26 1530 aa23.94■■□□□ 1.42
SLC3A2-216ENST00000541372 MYOM3Q5VTT5 1437 aa23.93■■□□□ 1.42
SLC3A2-216ENST00000541372 MIA2Q96PC5 1412 aa23.93■■□□□ 1.42
SLC3A2-216ENST00000541372 ARHGEF40Q8TER5 1519 aa23.91■■□□□ 1.42
SLC3A2-216ENST00000541372 ITSN2Q9NZM3 1697 aa23.89■■□□□ 1.42
SLC3A2-216ENST00000541372 CAMSAP2Q08AD1 1489 aa23.87■■□□□ 1.41
SLC3A2-216ENST00000541372 C9orf84Q5VXU9 1444 aa23.87■■□□□ 1.41
SLC3A2-216ENST00000541372 TSPY4P0CV99 314 aa23.87■■□□□ 1.41
SLC3A2-216ENST00000541372 TSPY10P0CW01 314 aa23.87■■□□□ 1.41
SLC3A2-216ENST00000541372 PPARGC1BQ86YN6 1023 aaKnown RBP23.86■■□□□ 1.41
SLC3A2-216ENST00000541372 MLECQ14165 292 aa23.85■■□□□ 1.41
SLC3A2-216ENST00000541372 HECW2Q9P2P5 1572 aa23.84■■□□□ 1.41
SLC3A2-216ENST00000541372 RTEL1-TNFRSF6BF6WH68 1400 aa23.82■■□□□ 1.4
SLC3A2-216ENST00000541372 CCDC141Q6ZP82 1450 aa23.81■■□□□ 1.4
SLC3A2-216ENST00000541372 FGD6Q6ZV73 1430 aa23.8■■□□□ 1.4
SLC3A2-216ENST00000541372 DIP2CQ9Y2E4 1556 aa23.79■■□□□ 1.4
SLC3A2-216ENST00000541372 KIDINS220Q9ULH0 1771 aa23.78■■□□□ 1.4
SLC3A2-216ENST00000541372 ATP7AQ04656 1500 aa23.76■■□□□ 1.39
SLC3A2-216ENST00000541372 ABCA6Q8N139 1617 aa23.75■■□□□ 1.39
SLC3A2-216ENST00000541372 ARHGEF5Q12774 1597 aa23.74■■□□□ 1.39
SLC3A2-216ENST00000541372 REREQ9P2R6 1566 aa23.74■■□□□ 1.39
SLC3A2-216ENST00000541372 SIGLEC1Q9BZZ2 1709 aa23.73■■□□□ 1.39
SLC3A2-216ENST00000541372 FAM50AQ14320 339 aaKnown RBP23.73■■□□□ 1.39
SLC3A2-216ENST00000541372 DHX29Q7Z478 1369 aaKnown RBP23.73■■□□□ 1.39
SLC3A2-216ENST00000541372 A2MP01023 1474 aa23.73■■□□□ 1.39
SLC3A2-216ENST00000541372 AGLP35573 1532 aa23.73■■□□□ 1.39
SLC3A2-216ENST00000541372 ADAMTSL3P82987 1691 aa23.73■■□□□ 1.39
SLC3A2-216ENST00000541372 BCORL1Q5H9F3 1711 aa23.73■■□□□ 1.39
SLC3A2-216ENST00000541372 TCOF1Q13428 1488 aaKnown RBP23.72■■□□□ 1.39
SLC3A2-216ENST00000541372 INO80Q9ULG1 1556 aaPredicted RBP23.71■■□□□ 1.39
SLC3A2-216ENST00000541372 ABCC5O15440 1437 aa23.71■■□□□ 1.39
SLC3A2-216ENST00000541372 PTPN23Q9H3S7 1636 aa23.7■■□□□ 1.38
SLC3A2-216ENST00000541372 PTPRMP28827 1452 aa23.69■■□□□ 1.38
SLC3A2-216ENST00000541372 GGT6Q6P531 493 aa23.66■■□□□ 1.38
SLC3A2-216ENST00000541372 ESF1Q9H501 851 aaKnown RBP23.66■■□□□ 1.38
SLC3A2-216ENST00000541372 KIF3BO15066 747 aa23.65■■□□□ 1.38
SLC3A2-216ENST00000541372 CHIC2Q9UKJ5 165 aa23.65■■□□□ 1.38
SLC3A2-216ENST00000541372 PPP6R1Q9UPN7 881 aa23.65■■□□□ 1.38
SLC3A2-216ENST00000541372 DAPK1P53355 1430 aa23.65■■□□□ 1.38
SLC3A2-216ENST00000541372 RRP7BPQ9NSQ0 103 aa23.64■■□□□ 1.37
SLC3A2-216ENST00000541372 PLPPR3Q6T4P5 718 aa23.63■■□□□ 1.37
SLC3A2-216ENST00000541372 MADDQ8WXG6 1647 aa23.62■■□□□ 1.37
SLC3A2-216ENST00000541372 CEBPAP49715 358 aaPredicted RBP23.61■■□□□ 1.37
SLC3A2-216ENST00000541372 MAST1Q9Y2H9 1570 aa23.61■■□□□ 1.37
SLC3A2-216ENST00000541372 PLXNC1O60486 1568 aa23.6■■□□□ 1.37
SLC3A2-216ENST00000541372 SHANK2Q9UPX8 1470 aa23.58■■□□□ 1.37
SLC3A2-216ENST00000541372 ANKRD30AQ9BXX3 1397 aa23.56■■□□□ 1.36
SLC3A2-216ENST00000541372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.56■■□□□ 1.36
SLC3A2-216ENST00000541372 ADGBQ8N7X0 1667 aa23.56■■□□□ 1.36
SLC3A2-216ENST00000541372 KIF15Q9NS87 1388 aa23.55■■□□□ 1.36
SLC3A2-216ENST00000541372 NCOA1Q15788 1441 aa23.54■■□□□ 1.36
SLC3A2-216ENST00000541372 CNTLNQ9NXG0 1405 aa23.54■■□□□ 1.36
SLC3A2-216ENST00000541372 DNMT1P26358 1616 aaKnown RBP23.54■■□□□ 1.36
SLC3A2-216ENST00000541372 ZMYM3Q14202 1370 aa23.53■■□□□ 1.36
SLC3A2-216ENST00000541372 RIMS1Q86UR5 1692 aaKnown RBP23.53■■□□□ 1.36
SLC3A2-216ENST00000541372 PTPRKQ15262 1439 aa23.52■■□□□ 1.36
SLC3A2-216ENST00000541372 ITGAEP38570 1179 aa23.52■■□□□ 1.36
SLC3A2-216ENST00000541372 WASHC2CQ9Y4E1 1318 aa23.5■■□□□ 1.35
SLC3A2-216ENST00000541372 DUOX2Q9NRD8 1548 aa23.49■■□□□ 1.35
SLC3A2-216ENST00000541372 RRBP1Q9P2E9 1410 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms