RNA–Protein interactions for RNA: ENST00000541371.5

PRPF19-206, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 3

Gene PRPF19, Length 943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-206ENST00000541371 YEATS2Q9ULM3 1422 aa21.67■■□□□ 1.06
PRPF19-206ENST00000541371 CLIP1P30622 1438 aa21.64■■□□□ 1.06
PRPF19-206ENST00000541371 TROQ12816 1431 aaPredicted RBP21.64■■□□□ 1.06
PRPF19-206ENST00000541371 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
PRPF19-206ENST00000541371 MLECQ14165 292 aa21.62■■□□□ 1.05
PRPF19-206ENST00000541371 MYO5CQ9NQX4 1742 aa21.61■■□□□ 1.05
PRPF19-206ENST00000541371 RIMS1Q86UR5 1692 aaKnown RBP21.61■■□□□ 1.05
PRPF19-206ENST00000541371 KIF14Q15058 1648 aa21.61■■□□□ 1.05
PRPF19-206ENST00000541371 PCF11O94913 1555 aaKnown RBP21.58■■□□□ 1.05
PRPF19-206ENST00000541371 ARHGAP5Q13017 1502 aa21.58■■□□□ 1.04
PRPF19-206ENST00000541371 ATP10AO60312 1499 aa21.58■■□□□ 1.04
PRPF19-206ENST00000541371 MYT1LQ9UL68 1186 aa21.56■■□□□ 1.04
PRPF19-206ENST00000541371 LMTK3Q96Q04 1460 aa21.56■■□□□ 1.04
PRPF19-206ENST00000541371 CASKIN1Q8WXD9 1431 aa21.55■■□□□ 1.04
PRPF19-206ENST00000541371 AFAP1Q8N556 730 aa21.55■■□□□ 1.04
PRPF19-206ENST00000541371 SIGLEC1Q9BZZ2 1709 aa21.55■■□□□ 1.04
PRPF19-206ENST00000541371 C9orf84Q5VXU9 1444 aa21.55■■□□□ 1.04
PRPF19-206ENST00000541371 ZNF518AQ6AHZ1 1483 aa21.54■■□□□ 1.04
PRPF19-206ENST00000541371 CCDC18Q5T9S5 1454 aa21.53■■□□□ 1.04
PRPF19-206ENST00000541371 LRRIQ1Q96JM4 1722 aa21.52■■□□□ 1.04
PRPF19-206ENST00000541371 HSPA2P54652 639 aa21.5■■□□□ 1.03
PRPF19-206ENST00000541371 FBXO41Q8TF61 875 aa21.49■■□□□ 1.03
PRPF19-206ENST00000541371 FER1L4A9Z1Z3 1794 aa21.48■■□□□ 1.03
PRPF19-206ENST00000541371 ARHGEF12Q9NZN5 1544 aa21.46■■□□□ 1.03
PRPF19-206ENST00000541371 KDM5CP41229 1560 aa21.46■■□□□ 1.03
PRPF19-206ENST00000541371 CDC42BPBQ9Y5S2 1711 aa21.45■■□□□ 1.02
PRPF19-206ENST00000541371 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.02
PRPF19-206ENST00000541371 CEBPAP49715 358 aaPredicted RBP21.42■■□□□ 1.02
PRPF19-206ENST00000541371 PREX2Q70Z35 1606 aa21.42■■□□□ 1.02
PRPF19-206ENST00000541371 MLH3Q9UHC1 1453 aa21.42■■□□□ 1.02
PRPF19-206ENST00000541371 TRAPPC8Q9Y2L5 1435 aa21.42■■□□□ 1.02
PRPF19-206ENST00000541371 ZNF777Q9ULD5 760 aaPredicted RBP21.4■■□□□ 1.02
PRPF19-206ENST00000541371 DIP2CQ9Y2E4 1556 aa21.4■■□□□ 1.02
PRPF19-206ENST00000541371 ABCC1P33527 1531 aa21.39■■□□□ 1.02
PRPF19-206ENST00000541371 ESF1Q9H501 851 aaKnown RBP21.37■■□□□ 1.01
PRPF19-206ENST00000541371 REREQ9P2R6 1566 aa21.36■■□□□ 1.01
PRPF19-206ENST00000541371 ITSN2Q9NZM3 1697 aa21.35■■□□□ 1.01
PRPF19-206ENST00000541371 ABCA6Q8N139 1617 aa21.35■■□□□ 1.01
PRPF19-206ENST00000541371 CDC42BPAQ5VT25 1732 aa21.35■■□□□ 1.01
PRPF19-206ENST00000541371 GPATCH8Q9UKJ3 1502 aaKnown RBP21.33■■□□□ 1
PRPF19-206ENST00000541371 AGLP35573 1532 aa21.32■■□□□ 1
PRPF19-206ENST00000541371 HNRNPMP52272 730 aaKnown RBP eCLIP21.31■■□□□ 1
PRPF19-206ENST00000541371 CFDP1Q9UEE9 299 aaPredicted RBP21.31■■□□□ 1
PRPF19-206ENST00000541371 PREX1Q8TCU6 1659 aa21.31■■□□□ 1
PRPF19-206ENST00000541371 SPAG9O60271 1321 aaKnown RBP21.3■■□□□ 1
PRPF19-206ENST00000541371 MTUS2Q5JR59 1369 aa21.3■■□□□ 1
PRPF19-206ENST00000541371 CCNB3Q8WWL7 1395 aa21.3■■□□□ 1
PRPF19-206ENST00000541371 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
PRPF19-206ENST00000541371 KIDINS220Q9ULH0 1771 aa21.28■■□□□ 1
PRPF19-206ENST00000541371 SAMD9LQ8IVG5 1584 aa21.27■■□□□ 1
PRPF19-206ENST00000541371 SYCP2Q9BX26 1530 aa21.27■■□□□ 1
PRPF19-206ENST00000541371 DMRT2Q9Y5R5 561 aa21.26■□□□□ 0.99
PRPF19-206ENST00000541371 SETD1BQ9UPS6 1966 aaKnown RBP21.26■□□□□ 0.99
PRPF19-206ENST00000541371 CERKQ8TCT0 537 aa21.25■□□□□ 0.99
PRPF19-206ENST00000541371 KIAA1107Q9UPP5 1409 aa21.25■□□□□ 0.99
PRPF19-206ENST00000541371 PLEKHH2Q8IVE3 1493 aa21.25■□□□□ 0.99
PRPF19-206ENST00000541371 CNTLNQ9NXG0 1405 aa21.24■□□□□ 0.99
PRPF19-206ENST00000541371 C3P01024 1663 aa21.22■□□□□ 0.99
PRPF19-206ENST00000541371 ATP7AQ04656 1500 aa21.19■□□□□ 0.98
PRPF19-206ENST00000541371 CEP162Q5TB80 1403 aa21.18■□□□□ 0.98
PRPF19-206ENST00000541371 EHBP1L1Q8N3D4 1523 aa21.16■□□□□ 0.98
PRPF19-206ENST00000541371 A2MP01023 1474 aa21.16■□□□□ 0.98
PRPF19-206ENST00000541371 ZMYM3Q14202 1370 aa21.16■□□□□ 0.98
PRPF19-206ENST00000541371 ZNF644Q9H582 1327 aaPredicted RBP21.16■□□□□ 0.98
PRPF19-206ENST00000541371 STRCQ7RTU9 1775 aa21.15■□□□□ 0.98
PRPF19-206ENST00000541371 SUPT6HQ7KZ85 1726 aaKnown RBP21.15■□□□□ 0.98
PRPF19-206ENST00000541371 GGT6Q6P531 493 aa21.14■□□□□ 0.97
PRPF19-206ENST00000541371 INO80Q9ULG1 1556 aaPredicted RBP21.14■□□□□ 0.97
PRPF19-206ENST00000541371 TIAM1Q13009 1591 aa21.13■□□□□ 0.97
PRPF19-206ENST00000541371 NPATQ14207 1427 aa21.12■□□□□ 0.97
PRPF19-206ENST00000541371 PTPRTO14522 1441 aa21.11■□□□□ 0.97
PRPF19-206ENST00000541371 MROH2AA6NES4 1674 aa21.1■□□□□ 0.97
PRPF19-206ENST00000541371 PLXNC1O60486 1568 aa21.1■□□□□ 0.97
PRPF19-206ENST00000541371 MBD5Q9P267 1494 aa21.09■□□□□ 0.97
PRPF19-206ENST00000541371 SOCS7O14512 581 aa21.09■□□□□ 0.97
PRPF19-206ENST00000541371 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
PRPF19-206ENST00000541371 ILDR2Q71H61 639 aa21.08■□□□□ 0.97
PRPF19-206ENST00000541371 RTEL1-TNFRSF6BF6WH68 1400 aa21.07■□□□□ 0.96
PRPF19-206ENST00000541371 NCOA1Q15788 1441 aa21.06■□□□□ 0.96
PRPF19-206ENST00000541371 CLTCQ00610 1675 aaKnown RBP21.05■□□□□ 0.96
PRPF19-206ENST00000541371 ADGBQ8N7X0 1667 aa21.05■□□□□ 0.96
PRPF19-206ENST00000541371 NCOA2Q15596 1464 aa21.05■□□□□ 0.96
PRPF19-206ENST00000541371 RSPH4AQ5TD94 716 aa21.04■□□□□ 0.96
PRPF19-206ENST00000541371 DHX29Q7Z478 1369 aaKnown RBP21.03■□□□□ 0.96
PRPF19-206ENST00000541371 CAMSAP1Q5T5Y3 1602 aa21.03■□□□□ 0.96
PRPF19-206ENST00000541371 PTPRKQ15262 1439 aa21.02■□□□□ 0.96
PRPF19-206ENST00000541371 LOC105371045A0A1W2PR82 267 aa21.01■□□□□ 0.95
PRPF19-206ENST00000541371 NCKAP5LQ9HCH0 1330 aa21.01■□□□□ 0.95
PRPF19-206ENST00000541371 CCDC141Q6ZP82 1450 aa21.01■□□□□ 0.95
PRPF19-206ENST00000541371 KIF3BO15066 747 aa21■□□□□ 0.95
PRPF19-206ENST00000541371 CAMSAP2Q08AD1 1489 aa21■□□□□ 0.95
PRPF19-206ENST00000541371 TSPY4P0CV99 314 aa20.98■□□□□ 0.95
PRPF19-206ENST00000541371 TSPY10P0CW01 314 aa20.98■□□□□ 0.95
PRPF19-206ENST00000541371 PKD2Q13563 968 aa20.98■□□□□ 0.95
PRPF19-206ENST00000541371 VPS8Q8N3P4 1428 aa20.96■□□□□ 0.95
PRPF19-206ENST00000541371 MYO3AQ8NEV4 1616 aa20.96■□□□□ 0.95
PRPF19-206ENST00000541371 LTBP4Q8N2S1 1624 aa20.95■□□□□ 0.94
PRPF19-206ENST00000541371 CEP170BQ9Y4F5 1589 aaPredicted RBP20.94■□□□□ 0.94
PRPF19-206ENST00000541371 PLA2R1Q13018 1463 aa20.94■□□□□ 0.94
PRPF19-206ENST00000541371 LRRC9Q6ZRR7 1453 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms