RNA–Protein interactions for RNA: ENST00000541359.1

LINC00943-207, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 676 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-207ENST00000541359 ARHGAP5Q13017 1502 aa33.92■■■■□ 3.02
LINC00943-207ENST00000541359 GPATCH8Q9UKJ3 1502 aaKnown RBP33.91■■■■□ 3.02
LINC00943-207ENST00000541359 RICTORQ6R327 1708 aa33.87■■■■□ 3.01
LINC00943-207ENST00000541359 EFCAB2Q5VUJ9 269 aa33.87■■■■□ 3.01
LINC00943-207ENST00000541359 SUPT6HQ7KZ85 1726 aaKnown RBP33.87■■■■□ 3.01
LINC00943-207ENST00000541359 ADGRL1O94910 1474 aa33.86■■■■□ 3.01
LINC00943-207ENST00000541359 KANK4Q5T7N3 995 aaPredicted RBP33.85■■■■□ 3.01
LINC00943-207ENST00000541359 DENND4BO75064 1496 aaPredicted RBP33.84■■■■□ 3.01
LINC00943-207ENST00000541359 NCOA2Q15596 1464 aa33.84■■■■□ 3.01
LINC00943-207ENST00000541359 RAPGEF3O95398 923 aa33.83■■■■□ 3.01
LINC00943-207ENST00000541359 CCNB3Q8WWL7 1395 aa33.81■■■■□ 3
LINC00943-207ENST00000541359 SCAPERQ9BY12 1400 aa33.8■■■■□ 3
LINC00943-207ENST00000541359 ABCC1P33527 1531 aa33.79■■■■□ 3
LINC00943-207ENST00000541359 POGZQ7Z3K3 1410 aa33.78■■■■□ 3
LINC00943-207ENST00000541359 ITSN2Q9NZM3 1697 aa33.77■■■■□ 3
LINC00943-207ENST00000541359 SAMD9LQ8IVG5 1584 aa33.77■■■■□ 3
LINC00943-207ENST00000541359 ZMYM4Q5VZL5 1548 aa33.75■■■□□ 2.99
LINC00943-207ENST00000541359 ARHGEF12Q9NZN5 1544 aa33.74■■■□□ 2.99
LINC00943-207ENST00000541359 APLP2Q06481 763 aa33.69■■■□□ 2.98
LINC00943-207ENST00000541359 CFDP1Q9UEE9 299 aaPredicted RBP33.68■■■□□ 2.98
LINC00943-207ENST00000541359 KDM5CP41229 1560 aa33.68■■■□□ 2.98
LINC00943-207ENST00000541359 ZNF518AQ6AHZ1 1483 aa33.65■■■□□ 2.98
LINC00943-207ENST00000541359 TRAPPC8Q9Y2L5 1435 aa33.65■■■□□ 2.98
LINC00943-207ENST00000541359 ARHGEF40Q8TER5 1519 aa33.64■■■□□ 2.98
LINC00943-207ENST00000541359 SYCP2Q9BX26 1530 aa33.64■■■□□ 2.98
LINC00943-207ENST00000541359 ZNF777Q9ULD5 760 aaPredicted RBP33.62■■■□□ 2.97
LINC00943-207ENST00000541359 KIAA1107Q9UPP5 1409 aa33.62■■■□□ 2.97
LINC00943-207ENST00000541359 MAGI2Q86UL8 1455 aa33.61■■■□□ 2.97
LINC00943-207ENST00000541359 PLEKHH2Q8IVE3 1493 aa33.61■■■□□ 2.97
LINC00943-207ENST00000541359 ZNF644Q9H582 1327 aaPredicted RBP33.59■■■□□ 2.97
LINC00943-207ENST00000541359 AFAP1Q8N556 730 aa33.59■■■□□ 2.97
LINC00943-207ENST00000541359 YEATS2Q9ULM3 1422 aa33.58■■■□□ 2.97
LINC00943-207ENST00000541359 ZFYVE16Q7Z3T8 1539 aa33.58■■■□□ 2.97
LINC00943-207ENST00000541359 MYOM3Q5VTT5 1437 aa33.56■■■□□ 2.96
LINC00943-207ENST00000541359 CAMSAP2Q08AD1 1489 aa33.55■■■□□ 2.96
LINC00943-207ENST00000541359 HECW2Q9P2P5 1572 aa33.55■■■□□ 2.96
LINC00943-207ENST00000541359 MBD5Q9P267 1494 aa33.54■■■□□ 2.96
LINC00943-207ENST00000541359 HNRNPMP52272 730 aaKnown RBP eCLIP33.53■■■□□ 2.96
LINC00943-207ENST00000541359 MLH3Q9UHC1 1453 aa33.52■■■□□ 2.96
LINC00943-207ENST00000541359 MIA2Q96PC5 1412 aa33.5■■■□□ 2.95
LINC00943-207ENST00000541359 SIGLEC1Q9BZZ2 1709 aa33.49■■■□□ 2.95
LINC00943-207ENST00000541359 KIDINS220Q9ULH0 1771 aa33.48■■■□□ 2.95
LINC00943-207ENST00000541359 DIP2CQ9Y2E4 1556 aa33.46■■■□□ 2.95
LINC00943-207ENST00000541359 ABCA6Q8N139 1617 aa33.46■■■□□ 2.95
LINC00943-207ENST00000541359 INO80Q9ULG1 1556 aaPredicted RBP33.44■■■□□ 2.94
LINC00943-207ENST00000541359 KDM4FA0A1W2PPD8 638 aa33.43■■■□□ 2.94
LINC00943-207ENST00000541359 ATP10AO60312 1499 aa33.42■■■□□ 2.94
LINC00943-207ENST00000541359 ARHGEF5Q12774 1597 aa33.42■■■□□ 2.94
LINC00943-207ENST00000541359 FGD6Q6ZV73 1430 aa33.39■■■□□ 2.94
LINC00943-207ENST00000541359 PTPN23Q9H3S7 1636 aa33.39■■■□□ 2.93
LINC00943-207ENST00000541359 CCDC141Q6ZP82 1450 aa33.38■■■□□ 2.93
LINC00943-207ENST00000541359 ATP7AQ04656 1500 aa33.38■■■□□ 2.93
LINC00943-207ENST00000541359 C9orf84Q5VXU9 1444 aa33.37■■■□□ 2.93
LINC00943-207ENST00000541359 REREQ9P2R6 1566 aa33.37■■■□□ 2.93
LINC00943-207ENST00000541359 TCOF1Q13428 1488 aaKnown RBP33.36■■■□□ 2.93
LINC00943-207ENST00000541359 SPAG9O60271 1321 aaKnown RBP33.35■■■□□ 2.93
LINC00943-207ENST00000541359 BCORL1Q5H9F3 1711 aa33.33■■■□□ 2.93
LINC00943-207ENST00000541359 ADAMTSL3P82987 1691 aa33.3■■■□□ 2.92
LINC00943-207ENST00000541359 RTEL1-TNFRSF6BF6WH68 1400 aa33.29■■■□□ 2.92
LINC00943-207ENST00000541359 RSPH4AQ5TD94 716 aa33.29■■■□□ 2.92
LINC00943-207ENST00000541359 PPARGC1BQ86YN6 1023 aaKnown RBP33.28■■■□□ 2.92
LINC00943-207ENST00000541359 MYT1LQ9UL68 1186 aa33.28■■■□□ 2.92
LINC00943-207ENST00000541359 MAST1Q9Y2H9 1570 aa33.25■■■□□ 2.91
LINC00943-207ENST00000541359 AGLP35573 1532 aa33.23■■■□□ 2.91
LINC00943-207ENST00000541359 PLXNC1O60486 1568 aa33.23■■■□□ 2.91
LINC00943-207ENST00000541359 ARID4BQ4LE39 1312 aaPredicted RBP33.23■■■□□ 2.91
LINC00943-207ENST00000541359 CROCC2H7BZ55 1655 aa33.23■■■□□ 2.91
LINC00943-207ENST00000541359 ADGBQ8N7X0 1667 aa33.22■■■□□ 2.91
LINC00943-207ENST00000541359 DNMT1P26358 1616 aaKnown RBP33.21■■■□□ 2.91
LINC00943-207ENST00000541359 ABCC5O15440 1437 aa33.2■■■□□ 2.91
LINC00943-207ENST00000541359 MADDQ8WXG6 1647 aa33.18■■■□□ 2.9
LINC00943-207ENST00000541359 A2MP01023 1474 aa33.18■■■□□ 2.9
LINC00943-207ENST00000541359 DAPK1P53355 1430 aa33.16■■■□□ 2.9
LINC00943-207ENST00000541359 SHANK2Q9UPX8 1470 aa33.16■■■□□ 2.9
LINC00943-207ENST00000541359 TSPY4P0CV99 314 aa33.13■■■□□ 2.89
LINC00943-207ENST00000541359 TSPY10P0CW01 314 aa33.13■■■□□ 2.89
LINC00943-207ENST00000541359 MLECQ14165 292 aa33.08■■■□□ 2.89
LINC00943-207ENST00000541359 FER1L4A9Z1Z3 1794 aa33.08■■■□□ 2.89
LINC00943-207ENST00000541359 DHX29Q7Z478 1369 aaKnown RBP33.08■■■□□ 2.89
LINC00943-207ENST00000541359 RIMS1Q86UR5 1692 aaKnown RBP33.07■■■□□ 2.89
LINC00943-207ENST00000541359 AEBP2Q6ZN18 517 aaPredicted RBP33.06■■■□□ 2.88
LINC00943-207ENST00000541359 FAM50AQ14320 339 aaKnown RBP33.05■■■□□ 2.88
LINC00943-207ENST00000541359 PTPRMP28827 1452 aa33.05■■■□□ 2.88
LINC00943-207ENST00000541359 RRBP1Q9P2E9 1410 aaKnown RBP33.02■■■□□ 2.88
LINC00943-207ENST00000541359 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.01■■■□□ 2.88
LINC00943-207ENST00000541359 PTPRKQ15262 1439 aa32.98■■■□□ 2.87
LINC00943-207ENST00000541359 ADGRL2O95490 1459 aa32.98■■■□□ 2.87
LINC00943-207ENST00000541359 DUOX2Q9NRD8 1548 aa32.95■■■□□ 2.87
LINC00943-207ENST00000541359 KIF15Q9NS87 1388 aa32.94■■■□□ 2.86
LINC00943-207ENST00000541359 EIF2AK4Q9P2K8 1649 aaKnown RBP32.93■■■□□ 2.86
LINC00943-207ENST00000541359 NCOA1Q15788 1441 aa32.93■■■□□ 2.86
LINC00943-207ENST00000541359 CHIC2Q9UKJ5 165 aa32.91■■■□□ 2.86
LINC00943-207ENST00000541359 RNF17Q9BXT8 1623 aaKnown RBP32.89■■■□□ 2.86
LINC00943-207ENST00000541359 ANKRD30AQ9BXX3 1397 aa32.89■■■□□ 2.86
LINC00943-207ENST00000541359 RRP7BPQ9NSQ0 103 aa32.88■■■□□ 2.85
LINC00943-207ENST00000541359 KIF3BO15066 747 aa32.87■■■□□ 2.85
LINC00943-207ENST00000541359 ERBINQ96RT1 1412 aa32.85■■■□□ 2.85
LINC00943-207ENST00000541359 CNTLNQ9NXG0 1405 aa32.85■■■□□ 2.85
LINC00943-207ENST00000541359 MROH2AA6NES4 1674 aa32.85■■■□□ 2.85
LINC00943-207ENST00000541359 MROH1Q8NDA8 1641 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms