RNA–Protein interactions for RNA: ENST00000541236.5

ARF3-207, Transcript of ADP ribosylation factor 3, humanhuman

TSL 2

Gene ARF3, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-207ENST00000541236 KIF14Q15058 1648 aa20.59■□□□□ 0.89
ARF3-207ENST00000541236 MYO5CQ9NQX4 1742 aa20.58■□□□□ 0.89
ARF3-207ENST00000541236 HSPA2P54652 639 aa20.58■□□□□ 0.89
ARF3-207ENST00000541236 UBTFP17480 764 aaKnown RBP20.57■□□□□ 0.88
ARF3-207ENST00000541236 ARHGEF12Q9NZN5 1544 aa20.57■□□□□ 0.88
ARF3-207ENST00000541236 ATP10AO60312 1499 aa20.56■□□□□ 0.88
ARF3-207ENST00000541236 EFCAB2Q5VUJ9 269 aa20.56■□□□□ 0.88
ARF3-207ENST00000541236 FER1L4A9Z1Z3 1794 aa20.56■□□□□ 0.88
ARF3-207ENST00000541236 TROQ12816 1431 aaPredicted RBP20.55■□□□□ 0.88
ARF3-207ENST00000541236 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
ARF3-207ENST00000541236 C9orf84Q5VXU9 1444 aa20.54■□□□□ 0.88
ARF3-207ENST00000541236 MLECQ14165 292 aa20.54■□□□□ 0.88
ARF3-207ENST00000541236 ATP1B4Q9UN42 357 aaPredicted RBP20.54■□□□□ 0.88
ARF3-207ENST00000541236 PLPPR3Q6T4P5 718 aa20.53■□□□□ 0.88
ARF3-207ENST00000541236 CDK11AQ9UQ88 783 aaPredicted RBP20.53■□□□□ 0.88
ARF3-207ENST00000541236 KDM5CP41229 1560 aa20.53■□□□□ 0.88
ARF3-207ENST00000541236 LRRIQ1Q96JM4 1722 aa20.53■□□□□ 0.88
ARF3-207ENST00000541236 ZNF518AQ6AHZ1 1483 aa20.52■□□□□ 0.88
ARF3-207ENST00000541236 ARHGAP5Q13017 1502 aa20.49■□□□□ 0.87
ARF3-207ENST00000541236 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
ARF3-207ENST00000541236 CLIP1P30622 1438 aa20.47■□□□□ 0.87
ARF3-207ENST00000541236 AFAP1Q8N556 730 aa20.47■□□□□ 0.87
ARF3-207ENST00000541236 DIP2CQ9Y2E4 1556 aa20.46■□□□□ 0.87
ARF3-207ENST00000541236 REREQ9P2R6 1566 aa20.45■□□□□ 0.86
ARF3-207ENST00000541236 PREX1Q8TCU6 1659 aa20.45■□□□□ 0.86
ARF3-207ENST00000541236 CDC42BPBQ9Y5S2 1711 aa20.44■□□□□ 0.86
ARF3-207ENST00000541236 CEBPAP49715 358 aaPredicted RBP20.43■□□□□ 0.86
ARF3-207ENST00000541236 MLH3Q9UHC1 1453 aa20.43■□□□□ 0.86
ARF3-207ENST00000541236 PREX2Q70Z35 1606 aa20.42■□□□□ 0.86
ARF3-207ENST00000541236 ABCA6Q8N139 1617 aa20.42■□□□□ 0.86
ARF3-207ENST00000541236 CASKIN1Q8WXD9 1431 aa20.42■□□□□ 0.86
ARF3-207ENST00000541236 ABCC1P33527 1531 aa20.41■□□□□ 0.86
ARF3-207ENST00000541236 CCDC18Q5T9S5 1454 aa20.39■□□□□ 0.85
ARF3-207ENST00000541236 TRAPPC8Q9Y2L5 1435 aa20.39■□□□□ 0.85
ARF3-207ENST00000541236 CERKQ8TCT0 537 aa20.39■□□□□ 0.85
ARF3-207ENST00000541236 AGLP35573 1532 aa20.37■□□□□ 0.85
ARF3-207ENST00000541236 ITSN2Q9NZM3 1697 aa20.36■□□□□ 0.85
ARF3-207ENST00000541236 STRCQ7RTU9 1775 aa20.35■□□□□ 0.85
ARF3-207ENST00000541236 UHRF1BP1Q6BDS2 1440 aa20.34■□□□□ 0.85
ARF3-207ENST00000541236 CDC42BPAQ5VT25 1732 aa20.33■□□□□ 0.85
ARF3-207ENST00000541236 KIDINS220Q9ULH0 1771 aa20.33■□□□□ 0.84
ARF3-207ENST00000541236 C3P01024 1663 aa20.32■□□□□ 0.84
ARF3-207ENST00000541236 MYT1LQ9UL68 1186 aa20.32■□□□□ 0.84
ARF3-207ENST00000541236 FYCO1Q9BQS8 1478 aa20.31■□□□□ 0.84
ARF3-207ENST00000541236 SAMD9LQ8IVG5 1584 aa20.28■□□□□ 0.84
ARF3-207ENST00000541236 SETD1BQ9UPS6 1966 aaKnown RBP20.28■□□□□ 0.84
ARF3-207ENST00000541236 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
ARF3-207ENST00000541236 GPATCH8Q9UKJ3 1502 aaKnown RBP20.26■□□□□ 0.83
ARF3-207ENST00000541236 SYCP2Q9BX26 1530 aa20.24■□□□□ 0.83
ARF3-207ENST00000541236 PTPRTO14522 1441 aa20.24■□□□□ 0.83
ARF3-207ENST00000541236 CNTLNQ9NXG0 1405 aa20.24■□□□□ 0.83
ARF3-207ENST00000541236 ESF1Q9H501 851 aaKnown RBP20.2■□□□□ 0.82
ARF3-207ENST00000541236 ZNF777Q9ULD5 760 aaPredicted RBP20.2■□□□□ 0.82
ARF3-207ENST00000541236 MROH2AA6NES4 1674 aa20.19■□□□□ 0.82
ARF3-207ENST00000541236 KIAA1107Q9UPP5 1409 aa20.19■□□□□ 0.82
ARF3-207ENST00000541236 NCOA1Q15788 1441 aa20.19■□□□□ 0.82
ARF3-207ENST00000541236 PLXNC1O60486 1568 aa20.18■□□□□ 0.82
ARF3-207ENST00000541236 INO80Q9ULG1 1556 aaPredicted RBP20.18■□□□□ 0.82
ARF3-207ENST00000541236 HNRNPMP52272 730 aaKnown RBP eCLIP20.18■□□□□ 0.82
ARF3-207ENST00000541236 SPAG9O60271 1321 aaKnown RBP20.18■□□□□ 0.82
ARF3-207ENST00000541236 NPATQ14207 1427 aa20.18■□□□□ 0.82
ARF3-207ENST00000541236 ATP7AQ04656 1500 aa20.17■□□□□ 0.82
ARF3-207ENST00000541236 LTBP4Q8N2S1 1624 aa20.17■□□□□ 0.82
ARF3-207ENST00000541236 ZMYM3Q14202 1370 aa20.15■□□□□ 0.82
ARF3-207ENST00000541236 PLEKHH2Q8IVE3 1493 aa20.15■□□□□ 0.82
ARF3-207ENST00000541236 SUPT6HQ7KZ85 1726 aaKnown RBP20.14■□□□□ 0.81
ARF3-207ENST00000541236 A2MP01023 1474 aa20.13■□□□□ 0.81
ARF3-207ENST00000541236 CFDP1Q9UEE9 299 aaPredicted RBP20.13■□□□□ 0.81
ARF3-207ENST00000541236 CCNB3Q8WWL7 1395 aa20.12■□□□□ 0.81
ARF3-207ENST00000541236 CAMSAP1Q5T5Y3 1602 aa20.12■□□□□ 0.81
ARF3-207ENST00000541236 CLTCQ00610 1675 aaKnown RBP20.1■□□□□ 0.81
ARF3-207ENST00000541236 IQSEC2Q5JU85 1478 aa20.09■□□□□ 0.81
ARF3-207ENST00000541236 MTUS2Q5JR59 1369 aa20.08■□□□□ 0.81
ARF3-207ENST00000541236 TIAM1Q13009 1591 aa20.08■□□□□ 0.81
ARF3-207ENST00000541236 MBD5Q9P267 1494 aa20.08■□□□□ 0.81
ARF3-207ENST00000541236 MYO3AQ8NEV4 1616 aa20.08■□□□□ 0.8
ARF3-207ENST00000541236 PTPRKQ15262 1439 aa20.08■□□□□ 0.8
ARF3-207ENST00000541236 ZNF142P52746 1687 aaPredicted RBP20.07■□□□□ 0.8
ARF3-207ENST00000541236 ZNF644Q9H582 1327 aaPredicted RBP20.06■□□□□ 0.8
ARF3-207ENST00000541236 ADGBQ8N7X0 1667 aa20.05■□□□□ 0.8
ARF3-207ENST00000541236 EHBP1L1Q8N3D4 1523 aa20.05■□□□□ 0.8
ARF3-207ENST00000541236 PLA2R1Q13018 1463 aa20.05■□□□□ 0.8
ARF3-207ENST00000541236 CEP170BQ9Y4F5 1589 aaPredicted RBP20.04■□□□□ 0.8
ARF3-207ENST00000541236 GGT6Q6P531 493 aa20.03■□□□□ 0.8
ARF3-207ENST00000541236 TCOF1Q13428 1488 aaKnown RBP20.03■□□□□ 0.8
ARF3-207ENST00000541236 NCKAP5LQ9HCH0 1330 aa20.02■□□□□ 0.8
ARF3-207ENST00000541236 DISP3Q9P2K9 1392 aa20.02■□□□□ 0.8
ARF3-207ENST00000541236 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.79
ARF3-207ENST00000541236 CEP162Q5TB80 1403 aa20.02■□□□□ 0.79
ARF3-207ENST00000541236 ILDR2Q71H61 639 aa20.01■□□□□ 0.79
ARF3-207ENST00000541236 PPP6R1Q9UPN7 881 aa20.01■□□□□ 0.79
ARF3-207ENST00000541236 ZNF335Q9H4Z2 1342 aaPredicted RBP19.99■□□□□ 0.79
ARF3-207ENST00000541236 PKD2Q13563 968 aa19.98■□□□□ 0.79
ARF3-207ENST00000541236 DHX29Q7Z478 1369 aaKnown RBP19.97■□□□□ 0.79
ARF3-207ENST00000541236 SPATA31D1Q6ZQQ2 1576 aa19.95■□□□□ 0.78
ARF3-207ENST00000541236 A2ML1A8K2U0 1454 aa19.95■□□□□ 0.78
ARF3-207ENST00000541236 DNMT1P26358 1616 aaKnown RBP19.94■□□□□ 0.78
ARF3-207ENST00000541236 NCOA2Q15596 1464 aa19.93■□□□□ 0.78
ARF3-207ENST00000541236 CCDC141Q6ZP82 1450 aa19.93■□□□□ 0.78
ARF3-207ENST00000541236 CAMSAP2Q08AD1 1489 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms