RNA–Protein interactions for RNA: ENST00000541189.5

MSRB3-210, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-210ENST00000541189 PPARGC1BQ86YN6 1023 aaKnown RBP21.55■■□□□ 1.04
MSRB3-210ENST00000541189 ARHGAP5Q13017 1502 aa21.55■■□□□ 1.04
MSRB3-210ENST00000541189 MYO5CQ9NQX4 1742 aa21.52■■□□□ 1.04
MSRB3-210ENST00000541189 ZNF777Q9ULD5 760 aaPredicted RBP21.52■■□□□ 1.04
MSRB3-210ENST00000541189 MYOM3Q5VTT5 1437 aa21.51■■□□□ 1.03
MSRB3-210ENST00000541189 PREX2Q70Z35 1606 aa21.51■■□□□ 1.03
MSRB3-210ENST00000541189 COL17A1Q9UMD9 1497 aaPredicted RBP21.5■■□□□ 1.03
MSRB3-210ENST00000541189 CFAP74Q9C0B2 1584 aa21.48■■□□□ 1.03
MSRB3-210ENST00000541189 MIA2Q96PC5 1412 aa21.48■■□□□ 1.03
MSRB3-210ENST00000541189 SCAPERQ9BY12 1400 aa21.48■■□□□ 1.03
MSRB3-210ENST00000541189 CDC42BPAQ5VT25 1732 aa21.48■■□□□ 1.03
MSRB3-210ENST00000541189 ADGRL1O94910 1474 aa21.47■■□□□ 1.03
MSRB3-210ENST00000541189 CDC42BPBQ9Y5S2 1711 aa21.47■■□□□ 1.03
MSRB3-210ENST00000541189 ZNF644Q9H582 1327 aaPredicted RBP21.47■■□□□ 1.03
MSRB3-210ENST00000541189 RAPGEF3O95398 923 aa21.46■■□□□ 1.03
MSRB3-210ENST00000541189 KIAA1107Q9UPP5 1409 aa21.46■■□□□ 1.03
MSRB3-210ENST00000541189 DENND4BO75064 1496 aaPredicted RBP21.45■■□□□ 1.03
MSRB3-210ENST00000541189 PLEKHH2Q8IVE3 1493 aa21.45■■□□□ 1.02
MSRB3-210ENST00000541189 ITSN2Q9NZM3 1697 aa21.44■■□□□ 1.02
MSRB3-210ENST00000541189 HNRNPMP52272 730 aaKnown RBP eCLIP21.43■■□□□ 1.02
MSRB3-210ENST00000541189 KDM6BO15054 1643 aa21.43■■□□□ 1.02
MSRB3-210ENST00000541189 FGD6Q6ZV73 1430 aa21.41■■□□□ 1.02
MSRB3-210ENST00000541189 RSPH4AQ5TD94 716 aa21.4■■□□□ 1.02
MSRB3-210ENST00000541189 AFAP1Q8N556 730 aa21.4■■□□□ 1.02
MSRB3-210ENST00000541189 SAMD9LQ8IVG5 1584 aa21.4■■□□□ 1.02
MSRB3-210ENST00000541189 ARHGEF12Q9NZN5 1544 aa21.39■■□□□ 1.02
MSRB3-210ENST00000541189 ABCC1P33527 1531 aa21.39■■□□□ 1.01
MSRB3-210ENST00000541189 POGZQ7Z3K3 1410 aa21.38■■□□□ 1.01
MSRB3-210ENST00000541189 CAMSAP2Q08AD1 1489 aa21.37■■□□□ 1.01
MSRB3-210ENST00000541189 MBD5Q9P267 1494 aa21.37■■□□□ 1.01
MSRB3-210ENST00000541189 TRAPPC8Q9Y2L5 1435 aa21.37■■□□□ 1.01
MSRB3-210ENST00000541189 ZNF518AQ6AHZ1 1483 aa21.36■■□□□ 1.01
MSRB3-210ENST00000541189 SYCP2Q9BX26 1530 aa21.34■■□□□ 1.01
MSRB3-210ENST00000541189 TCOF1Q13428 1488 aaKnown RBP21.33■■□□□ 1.01
MSRB3-210ENST00000541189 FAM50AQ14320 339 aaKnown RBP21.32■■□□□ 1
MSRB3-210ENST00000541189 SPAG9O60271 1321 aaKnown RBP21.3■■□□□ 1
MSRB3-210ENST00000541189 PTPN23Q9H3S7 1636 aa21.3■■□□□ 1
MSRB3-210ENST00000541189 TSPY4P0CV99 314 aa21.3■■□□□ 1
MSRB3-210ENST00000541189 TSPY10P0CW01 314 aa21.3■■□□□ 1
MSRB3-210ENST00000541189 MAGI2Q86UL8 1455 aa21.3■■□□□ 1
MSRB3-210ENST00000541189 FRMPD1Q5SYB0 1578 aa21.3■■□□□ 1
MSRB3-210ENST00000541189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.29■■□□□ 1
MSRB3-210ENST00000541189 MLH3Q9UHC1 1453 aa21.28■■□□□ 1
MSRB3-210ENST00000541189 RICTORQ6R327 1708 aa21.28■■□□□ 1
MSRB3-210ENST00000541189 ZMYM4Q5VZL5 1548 aa21.28■■□□□ 1
MSRB3-210ENST00000541189 KDM5CP41229 1560 aa21.27■■□□□ 1
MSRB3-210ENST00000541189 CCDC141Q6ZP82 1450 aa21.27■■□□□ 1
MSRB3-210ENST00000541189 MYT1LQ9UL68 1186 aa21.27■■□□□ 1
MSRB3-210ENST00000541189 RRBP1Q9P2E9 1410 aaKnown RBP21.27■■□□□ 1
MSRB3-210ENST00000541189 ARHGEF5Q12774 1597 aa21.26■□□□□ 0.99
MSRB3-210ENST00000541189 ABCC5O15440 1437 aa21.24■□□□□ 0.99
MSRB3-210ENST00000541189 RTEL1-TNFRSF6BF6WH68 1400 aa21.23■□□□□ 0.99
MSRB3-210ENST00000541189 YEATS2Q9ULM3 1422 aa21.21■□□□□ 0.99
MSRB3-210ENST00000541189 DAPK1P53355 1430 aa21.21■□□□□ 0.99
MSRB3-210ENST00000541189 ZFYVE16Q7Z3T8 1539 aa21.2■□□□□ 0.98
MSRB3-210ENST00000541189 C9orf84Q5VXU9 1444 aa21.18■□□□□ 0.98
MSRB3-210ENST00000541189 ATP10AO60312 1499 aa21.18■□□□□ 0.98
MSRB3-210ENST00000541189 HECW2Q9P2P5 1572 aa21.18■□□□□ 0.98
MSRB3-210ENST00000541189 ATP7AQ04656 1500 aa21.16■□□□□ 0.98
MSRB3-210ENST00000541189 SHANK2Q9UPX8 1470 aa21.16■□□□□ 0.98
MSRB3-210ENST00000541189 DNMT1P26358 1616 aaKnown RBP21.15■□□□□ 0.98
MSRB3-210ENST00000541189 ARHGEF40Q8TER5 1519 aa21.14■□□□□ 0.98
MSRB3-210ENST00000541189 ITGAEP38570 1179 aa21.14■□□□□ 0.97
MSRB3-210ENST00000541189 CHIC2Q9UKJ5 165 aa21.14■□□□□ 0.97
MSRB3-210ENST00000541189 INO80Q9ULG1 1556 aaPredicted RBP21.14■□□□□ 0.97
MSRB3-210ENST00000541189 MAST1Q9Y2H9 1570 aa21.14■□□□□ 0.97
MSRB3-210ENST00000541189 KIDINS220Q9ULH0 1771 aa21.13■□□□□ 0.97
MSRB3-210ENST00000541189 PTPRKQ15262 1439 aa21.12■□□□□ 0.97
MSRB3-210ENST00000541189 ANKRD30AQ9BXX3 1397 aa21.11■□□□□ 0.97
MSRB3-210ENST00000541189 DHX29Q7Z478 1369 aaKnown RBP21.1■□□□□ 0.97
MSRB3-210ENST00000541189 DIP2CQ9Y2E4 1556 aa21.1■□□□□ 0.97
MSRB3-210ENST00000541189 RRP7BPQ9NSQ0 103 aa21.1■□□□□ 0.97
MSRB3-210ENST00000541189 NCOA1Q15788 1441 aa21.1■□□□□ 0.97
MSRB3-210ENST00000541189 ARID4BQ4LE39 1312 aaPredicted RBP21.08■□□□□ 0.97
MSRB3-210ENST00000541189 A2MP01023 1474 aa21.08■□□□□ 0.97
MSRB3-210ENST00000541189 ROCK1Q13464 1354 aa21.08■□□□□ 0.96
MSRB3-210ENST00000541189 ABCA6Q8N139 1617 aa21.07■□□□□ 0.96
MSRB3-210ENST00000541189 ADGRL2O95490 1459 aa21.07■□□□□ 0.96
MSRB3-210ENST00000541189 REREQ9P2R6 1566 aa21.06■□□□□ 0.96
MSRB3-210ENST00000541189 KIF15Q9NS87 1388 aa21.06■□□□□ 0.96
MSRB3-210ENST00000541189 CROCC2H7BZ55 1655 aa21.04■□□□□ 0.96
MSRB3-210ENST00000541189 AGLP35573 1532 aa21.04■□□□□ 0.96
MSRB3-210ENST00000541189 PLXNC1O60486 1568 aa21.03■□□□□ 0.96
MSRB3-210ENST00000541189 DUOX2Q9NRD8 1548 aa21.01■□□□□ 0.95
MSRB3-210ENST00000541189 ADGBQ8N7X0 1667 aa20.99■□□□□ 0.95
MSRB3-210ENST00000541189 KIF3BO15066 747 aa20.99■□□□□ 0.95
MSRB3-210ENST00000541189 MLECQ14165 292 aa20.97■□□□□ 0.95
MSRB3-210ENST00000541189 ERBINQ96RT1 1412 aa20.96■□□□□ 0.95
MSRB3-210ENST00000541189 PPP6R1Q9UPN7 881 aa20.96■□□□□ 0.95
MSRB3-210ENST00000541189 ANKRD50Q9ULJ7 1429 aa20.95■□□□□ 0.95
MSRB3-210ENST00000541189 GGT6Q6P531 493 aa20.95■□□□□ 0.94
MSRB3-210ENST00000541189 SIGLEC1Q9BZZ2 1709 aa20.94■□□□□ 0.94
MSRB3-210ENST00000541189 KDM4FA0A1W2PPD8 638 aa20.93■□□□□ 0.94
MSRB3-210ENST00000541189 TRIM26Q12899 539 aaPredicted RBP20.93■□□□□ 0.94
MSRB3-210ENST00000541189 HFM1A2PYH4 1435 aa20.91■□□□□ 0.94
MSRB3-210ENST00000541189 NAIPQ13075 1403 aa20.91■□□□□ 0.94
MSRB3-210ENST00000541189 ESF1Q9H501 851 aaKnown RBP20.89■□□□□ 0.93
MSRB3-210ENST00000541189 BCORL1Q5H9F3 1711 aa20.87■□□□□ 0.93
MSRB3-210ENST00000541189 EIF2AK4Q9P2K8 1649 aaKnown RBP20.87■□□□□ 0.93
MSRB3-210ENST00000541189 WASHC2CQ9Y4E1 1318 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms