RNA–Protein interactions for RNA: ENST00000541168.1

SMCO2-205, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-205ENST00000541168 NLRP6P59044 892 aa16.83■□□□□ 0.28
SMCO2-205ENST00000541168 STK24Q9Y6E0 443 aa16.83■□□□□ 0.28
SMCO2-205ENST00000541168 ECM2O94769 699 aaPredicted RBP16.81■□□□□ 0.28
SMCO2-205ENST00000541168 FBXO22Q8NEZ5 403 aa16.79■□□□□ 0.28
SMCO2-205ENST00000541168 STK25O00506 426 aa16.77■□□□□ 0.28
SMCO2-205ENST00000541168 ERBB3P21860 1342 aa16.76■□□□□ 0.27
SMCO2-205ENST00000541168 ZSWIM6Q9HCJ5 1215 aa16.74■□□□□ 0.27
SMCO2-205ENST00000541168 MFRPQ9BY79 579 aa16.73■□□□□ 0.27
SMCO2-205ENST00000541168 PKD2Q13563 968 aa16.7■□□□□ 0.26
SMCO2-205ENST00000541168 RGL2O15211 777 aa16.68■□□□□ 0.26
SMCO2-205ENST00000541168 VARS2Q5ST30 1063 aaKnown RBP16.67■□□□□ 0.26
SMCO2-205ENST00000541168 GPR153Q6NV75 609 aa16.65■□□□□ 0.26
SMCO2-205ENST00000541168 ARSIQ5FYB1 569 aa16.57■□□□□ 0.24
SMCO2-205ENST00000541168 KIF3CO14782 793 aa16.54■□□□□ 0.24
SMCO2-205ENST00000541168 C2orf72A6NCS6 295 aa16.53■□□□□ 0.24
SMCO2-205ENST00000541168 ZNF687Q8N1G0 1237 aa16.53■□□□□ 0.24
SMCO2-205ENST00000541168 KHSRPQ92945 711 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMCO2-205ENST00000541168 ZNF316A6NFI3 1004 aaPredicted RBP16.46■□□□□ 0.23
SMCO2-205ENST00000541168 TMC2Q8TDI7 906 aa16.44■□□□□ 0.22
SMCO2-205ENST00000541168 PPP1R37O75864 691 aa16.42■□□□□ 0.22
SMCO2-205ENST00000541168 RNF166Q96A37 237 aaPredicted RBP16.4■□□□□ 0.22
SMCO2-205ENST00000541168 NUDT7P0C024 238 aa16.38■□□□□ 0.21
SMCO2-205ENST00000541168 SLC34A2O95436 690 aa16.37■□□□□ 0.21
SMCO2-205ENST00000541168 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
SMCO2-205ENST00000541168 HS6ST3Q8IZP7 471 aa16.35■□□□□ 0.21
SMCO2-205ENST00000541168 PCDHGA4Q9Y5G9 962 aa16.35■□□□□ 0.21
SMCO2-205ENST00000541168 PTGER2P43116 358 aa16.31■□□□□ 0.2
SMCO2-205ENST00000541168 ANKRD13DQ6ZTN6 518 aa16.3■□□□□ 0.2
SMCO2-205ENST00000541168 LHX6Q9UPM6 363 aa16.29■□□□□ 0.2
SMCO2-205ENST00000541168 LSM11P83369 360 aaKnown RBP eCLIP16.28■□□□□ 0.2
SMCO2-205ENST00000541168 PBX2P40425 430 aa16.25■□□□□ 0.19
SMCO2-205ENST00000541168 CHGAP10645 457 aaKnown RBP16.23■□□□□ 0.19
SMCO2-205ENST00000541168 FOXK1P85037 733 aa16.19■□□□□ 0.18
SMCO2-205ENST00000541168 POTEEQ6S8J3 1075 aa16.18■□□□□ 0.18
SMCO2-205ENST00000541168 PLPP6Q8IY26 295 aa16.18■□□□□ 0.18
SMCO2-205ENST00000541168 PTCD2Q8WV60 388 aaKnown RBP16.17■□□□□ 0.18
SMCO2-205ENST00000541168 GPHNQ9NQX3 736 aaPredicted RBP16.17■□□□□ 0.18
SMCO2-205ENST00000541168 AXIN2Q9Y2T1 843 aa16.17■□□□□ 0.18
SMCO2-205ENST00000541168 PSDA5PKW4 1024 aaPredicted RBP16.14■□□□□ 0.17
SMCO2-205ENST00000541168 KDM4FA0A1W2PPD8 638 aa16.12■□□□□ 0.17
SMCO2-205ENST00000541168 DSG2Q14126 1118 aa16.12■□□□□ 0.17
SMCO2-205ENST00000541168 NKX1-1Q15270 411 aaPredicted RBP16.12■□□□□ 0.17
SMCO2-205ENST00000541168 DNAJC5Q9H3Z4 198 aa16.12■□□□□ 0.17
SMCO2-205ENST00000541168 RYDENQ9NUL5 291 aaKnown RBP16.07■□□□□ 0.16
SMCO2-205ENST00000541168 ARHGAP33O14559 1287 aa16.06■□□□□ 0.16
SMCO2-205ENST00000541168 TBC1D12O60347 775 aa16.04■□□□□ 0.16
SMCO2-205ENST00000541168 ADGRD1Q6QNK2 874 aa16.02■□□□□ 0.16
SMCO2-205ENST00000541168 PPP4R3BQ5MIZ7 849 aa16.01■□□□□ 0.15
SMCO2-205ENST00000541168 CRISPLD2Q9H0B8 497 aa15.98■□□□□ 0.15
SMCO2-205ENST00000541168 PSEN2P49810 448 aa15.96■□□□□ 0.15
SMCO2-205ENST00000541168 DMRTA1Q5VZB9 504 aa15.96■□□□□ 0.15
SMCO2-205ENST00000541168 OXER1Q8TDS5 423 aa15.95■□□□□ 0.14
SMCO2-205ENST00000541168 UPF1Q92900 1129 aaKnown RBP eCLIP15.95■□□□□ 0.14
SMCO2-205ENST00000541168 TK2O00142 265 aa15.94■□□□□ 0.14
SMCO2-205ENST00000541168 PPP1R15BQ5SWA1 713 aa15.93■□□□□ 0.14
SMCO2-205ENST00000541168 HRO43593 1189 aa15.88■□□□□ 0.13
SMCO2-205ENST00000541168 KCNH8Q96L42 1107 aa15.88■□□□□ 0.13
SMCO2-205ENST00000541168 KCNK17Q96T54 332 aa15.88■□□□□ 0.13
SMCO2-205ENST00000541168 HCSTQ9UBK5 93 aa15.88■□□□□ 0.13
SMCO2-205ENST00000541168 NCKAP5LQ9HCH0 1330 aa15.88■□□□□ 0.13
SMCO2-205ENST00000541168 GTPBP6O43824 516 aaPredicted RBP15.85■□□□□ 0.13
SMCO2-205ENST00000541168 PDE4AP27815 886 aa15.85■□□□□ 0.13
SMCO2-205ENST00000541168 ZNF454Q8N9F8 522 aa15.84■□□□□ 0.13
SMCO2-205ENST00000541168 STAC3Q96MF2 364 aa15.79■□□□□ 0.12
SMCO2-205ENST00000541168 DCAF8L2P0C7V8 631 aa15.78■□□□□ 0.12
SMCO2-205ENST00000541168 BCL2L12Q9HB09 334 aa15.78■□□□□ 0.12
SMCO2-205ENST00000541168 PLA2G2EQ9NZK7 142 aa15.78■□□□□ 0.12
SMCO2-205ENST00000541168 LARP6Q9BRS8 491 aaKnown RBP15.77■□□□□ 0.12
SMCO2-205ENST00000541168 FOSBP53539 338 aa15.76■□□□□ 0.11
SMCO2-205ENST00000541168 KCTD12Q96CX2 325 aaKnown RBP15.76■□□□□ 0.11
SMCO2-205ENST00000541168 DDX27Q96GQ7 796 aaKnown RBP15.76■□□□□ 0.11
SMCO2-205ENST00000541168 VPS9D1Q9Y2B5 631 aa15.75■□□□□ 0.11
SMCO2-205ENST00000541168 EVI5O60447 810 aa15.72■□□□□ 0.11
SMCO2-205ENST00000541168 JPH4Q96JJ6 628 aa15.72■□□□□ 0.11
SMCO2-205ENST00000541168 ANO8Q9HCE9 1232 aaPredicted RBP15.72■□□□□ 0.11
SMCO2-205ENST00000541168 MFSD10Q14728 455 aa15.71■□□□□ 0.11
SMCO2-205ENST00000541168 PTPREP23469 700 aa15.7■□□□□ 0.1
SMCO2-205ENST00000541168 SLC4A5Q9BY07 1137 aa15.7■□□□□ 0.1
SMCO2-205ENST00000541168 MAP3K9P80192 1104 aa15.65■□□□□ 0.1
SMCO2-205ENST00000541168 ZDHHC16Q969W1 377 aa15.65■□□□□ 0.1
SMCO2-205ENST00000541168 ZBED2Q9BTP6 218 aa15.63■□□□□ 0.09
SMCO2-205ENST00000541168 ADAM33Q9BZ11 813 aa15.63■□□□□ 0.09
SMCO2-205ENST00000541168 EMILIN3Q9NT22 766 aa15.63■□□□□ 0.09
SMCO2-205ENST00000541168 CADPS2Q86UW7 1296 aa15.6■□□□□ 0.09
SMCO2-205ENST00000541168 BHMG1C9JSJ3 638 aaPredicted RBP15.59■□□□□ 0.09
SMCO2-205ENST00000541168 PTPN5P54829 565 aa15.58■□□□□ 0.08
SMCO2-205ENST00000541168 MRPL50Q8N5N7 158 aaKnown RBP15.55■□□□□ 0.08
SMCO2-205ENST00000541168 GOLGA8CPA6NN73 597 aa15.54■□□□□ 0.08
SMCO2-205ENST00000541168 THSD4Q6ZMP0 1018 aa15.54■□□□□ 0.08
SMCO2-205ENST00000541168 NBPF3Q9H094 633 aa15.53■□□□□ 0.08
SMCO2-205ENST00000541168 PCDHGA10Q9Y5H3 936 aa15.53■□□□□ 0.08
SMCO2-205ENST00000541168 PPP1R3GB7ZBB8 358 aa15.51■□□□□ 0.07
SMCO2-205ENST00000541168 WNT2BQ93097 391 aa15.51■□□□□ 0.07
SMCO2-205ENST00000541168 TYW1BQ6NUM6 668 aa15.47■□□□□ 0.07
SMCO2-205ENST00000541168 FBXW7Q969H0 707 aa15.47■□□□□ 0.07
SMCO2-205ENST00000541168 PHF14O94880 888 aa15.46■□□□□ 0.07
SMCO2-205ENST00000541168 CAMK2BQ13554 666 aa15.45■□□□□ 0.06
SMCO2-205ENST00000541168 COL9A1P20849 921 aa15.44■□□□□ 0.06
SMCO2-205ENST00000541168 PROX2Q3B8N5 592 aa15.44■□□□□ 0.06
SMCO2-205ENST00000541168 RABGEF1Q9UJ41 708 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms