RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 PLEKHD1A6NEE1 506 aa14.22□□□□□ -0.13
PAAF1-209ENST00000540659 ABCA9Q8IUA7 1624 aa14.22□□□□□ -0.13
PAAF1-209ENST00000540659 CDC42BPAQ5VT25 1732 aa14.21□□□□□ -0.13
PAAF1-209ENST00000540659 MIA2Q96PC5 1412 aa14.21□□□□□ -0.13
PAAF1-209ENST00000540659 KDM6BO15054 1643 aa14.2□□□□□ -0.14
PAAF1-209ENST00000540659 SETD5Q9C0A6 1442 aa14.2□□□□□ -0.14
PAAF1-209ENST00000540659 RAB3GAP2Q9H2M9 1393 aa14.2□□□□□ -0.14
PAAF1-209ENST00000540659 KCNH8Q96L42 1107 aa14.19□□□□□ -0.14
PAAF1-209ENST00000540659 PTPRKQ15262 1439 aa14.18□□□□□ -0.14
PAAF1-209ENST00000540659 TEX14Q8IWB6 1497 aa14.18□□□□□ -0.14
PAAF1-209ENST00000540659 CD109Q6YHK3 1445 aa14.17□□□□□ -0.14
PAAF1-209ENST00000540659 DHX57Q6P158 1386 aaKnown RBP14.17□□□□□ -0.14
PAAF1-209ENST00000540659 TTC37Q6PGP7 1564 aa14.17□□□□□ -0.14
PAAF1-209ENST00000540659 GPATCH8Q9UKJ3 1502 aaKnown RBP14.15□□□□□ -0.14
PAAF1-209ENST00000540659 DNMT1P26358 1616 aaKnown RBP14.15□□□□□ -0.14
PAAF1-209ENST00000540659 CAMSAP2Q08AD1 1489 aa14.15□□□□□ -0.14
PAAF1-209ENST00000540659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.15□□□□□ -0.14
PAAF1-209ENST00000540659 GCC2Q8IWJ2 1684 aa14.14□□□□□ -0.15
PAAF1-209ENST00000540659 CHIC2Q9UKJ5 165 aa14.14□□□□□ -0.15
PAAF1-209ENST00000540659 ZNF777Q9ULD5 760 aaPredicted RBP14.14□□□□□ -0.15
PAAF1-209ENST00000540659 ZNF644Q9H582 1327 aaPredicted RBP14.14□□□□□ -0.15
PAAF1-209ENST00000540659 CDC42BPBQ9Y5S2 1711 aa14.13□□□□□ -0.15
PAAF1-209ENST00000540659 CFDP1Q9UEE9 299 aaPredicted RBP14.13□□□□□ -0.15
PAAF1-209ENST00000540659 CROCC2H7BZ55 1655 aa14.13□□□□□ -0.15
PAAF1-209ENST00000540659 PREX2Q70Z35 1606 aa14.12□□□□□ -0.15
PAAF1-209ENST00000540659 DAPK1P53355 1430 aa14.12□□□□□ -0.15
PAAF1-209ENST00000540659 MYO5CQ9NQX4 1742 aa14.12□□□□□ -0.15
PAAF1-209ENST00000540659 ADGBQ8N7X0 1667 aa14.11□□□□□ -0.15
PAAF1-209ENST00000540659 HFM1A2PYH4 1435 aa14.09□□□□□ -0.15
PAAF1-209ENST00000540659 RRP7BPQ9NSQ0 103 aa14.09□□□□□ -0.15
PAAF1-209ENST00000540659 COL17A1Q9UMD9 1497 aaPredicted RBP14.09□□□□□ -0.15
PAAF1-209ENST00000540659 CFAP74Q9C0B2 1584 aa14.09□□□□□ -0.15
PAAF1-209ENST00000540659 ABCC5O15440 1437 aa14.07□□□□□ -0.16
PAAF1-209ENST00000540659 NAIPQ13075 1403 aa14.07□□□□□ -0.16
PAAF1-209ENST00000540659 ARHGAP5Q13017 1502 aa14.06□□□□□ -0.16
PAAF1-209ENST00000540659 SAMD9LQ8IVG5 1584 aa14.06□□□□□ -0.16
PAAF1-209ENST00000540659 NEO1Q92859 1461 aa14.06□□□□□ -0.16
PAAF1-209ENST00000540659 ACIN1Q9UKV3 1341 aaKnown RBP14.05□□□□□ -0.16
PAAF1-209ENST00000540659 FANCAO15360 1455 aa14.04□□□□□ -0.16
PAAF1-209ENST00000540659 ARAP3Q8WWN8 1544 aa14.04□□□□□ -0.16
PAAF1-209ENST00000540659 FRMPD1Q5SYB0 1578 aa14.03□□□□□ -0.16
PAAF1-209ENST00000540659 AKNAQ7Z591 1439 aa14.02□□□□□ -0.16
PAAF1-209ENST00000540659 CLSPNQ9HAW4 1339 aa14.02□□□□□ -0.17
PAAF1-209ENST00000540659 PLCH2O75038 1416 aa14.01□□□□□ -0.17
PAAF1-209ENST00000540659 RICTORQ6R327 1708 aa14.01□□□□□ -0.17
PAAF1-209ENST00000540659 HNRNPMP52272 730 aaKnown RBP eCLIP14□□□□□ -0.17
PAAF1-209ENST00000540659 ARHGEF5Q12774 1597 aa14□□□□□ -0.17
PAAF1-209ENST00000540659 SYCP2Q9BX26 1530 aa14□□□□□ -0.17
PAAF1-209ENST00000540659 ROCK1Q13464 1354 aa13.99□□□□□ -0.17
PAAF1-209ENST00000540659 TRIM52Q96A61 297 aa13.98□□□□□ -0.17
PAAF1-209ENST00000540659 ADGRL2O95490 1459 aa13.97□□□□□ -0.17
PAAF1-209ENST00000540659 ADGRL1O94910 1474 aa13.96□□□□□ -0.17
PAAF1-209ENST00000540659 CCDC141Q6ZP82 1450 aa13.96□□□□□ -0.17
PAAF1-209ENST00000540659 SHANK2Q9UPX8 1470 aa13.96□□□□□ -0.17
PAAF1-209ENST00000540659 C9orf84Q5VXU9 1444 aa13.96□□□□□ -0.18
PAAF1-209ENST00000540659 DENND4BO75064 1496 aaPredicted RBP13.95□□□□□ -0.18
PAAF1-209ENST00000540659 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
PAAF1-209ENST00000540659 ANKRD30AQ9BXX3 1397 aa13.95□□□□□ -0.18
PAAF1-209ENST00000540659 MBD5Q9P267 1494 aa13.94□□□□□ -0.18
PAAF1-209ENST00000540659 TSPY4P0CV99 314 aa13.94□□□□□ -0.18
PAAF1-209ENST00000540659 TSPY10P0CW01 314 aa13.94□□□□□ -0.18
PAAF1-209ENST00000540659 NEUROD1Q13562 356 aa13.94□□□□□ -0.18
PAAF1-209ENST00000540659 ABCC1P33527 1531 aa13.94□□□□□ -0.18
PAAF1-209ENST00000540659 ZMYM4Q5VZL5 1548 aa13.94□□□□□ -0.18
PAAF1-209ENST00000540659 NCOA1Q15788 1441 aa13.93□□□□□ -0.18
PAAF1-209ENST00000540659 POGZQ7Z3K3 1410 aa13.93□□□□□ -0.18
PAAF1-209ENST00000540659 SIN3AQ96ST3 1273 aa13.93□□□□□ -0.18
PAAF1-209ENST00000540659 ARHGEF40Q8TER5 1519 aa13.93□□□□□ -0.18
PAAF1-209ENST00000540659 PLEKHH2Q8IVE3 1493 aa13.93□□□□□ -0.18
PAAF1-209ENST00000540659 RAPGEF3O95398 923 aa13.92□□□□□ -0.18
PAAF1-209ENST00000540659 MAST1Q9Y2H9 1570 aa13.92□□□□□ -0.18
PAAF1-209ENST00000540659 SCAPERQ9BY12 1400 aa13.91□□□□□ -0.18
PAAF1-209ENST00000540659 EFCAB2Q5VUJ9 269 aa13.91□□□□□ -0.18
PAAF1-209ENST00000540659 ARHGEF12Q9NZN5 1544 aa13.9□□□□□ -0.18
PAAF1-209ENST00000540659 KDM5CP41229 1560 aa13.89□□□□□ -0.19
PAAF1-209ENST00000540659 ZNF518AQ6AHZ1 1483 aa13.88□□□□□ -0.19
PAAF1-209ENST00000540659 KIAA1107Q9UPP5 1409 aa13.88□□□□□ -0.19
PAAF1-209ENST00000540659 ZFYVE16Q7Z3T8 1539 aa13.87□□□□□ -0.19
PAAF1-209ENST00000540659 MPHOSPH9Q99550 1183 aa13.87□□□□□ -0.19
PAAF1-209ENST00000540659 ANKRD50Q9ULJ7 1429 aa13.87□□□□□ -0.19
PAAF1-209ENST00000540659 HECW2Q9P2P5 1572 aa13.87□□□□□ -0.19
PAAF1-209ENST00000540659 KIF15Q9NS87 1388 aa13.86□□□□□ -0.19
PAAF1-209ENST00000540659 PLXNC1O60486 1568 aa13.86□□□□□ -0.19
PAAF1-209ENST00000540659 YEATS2Q9ULM3 1422 aa13.85□□□□□ -0.19
PAAF1-209ENST00000540659 TRAPPC8Q9Y2L5 1435 aa13.85□□□□□ -0.19
PAAF1-209ENST00000540659 SIGLEC1Q9BZZ2 1709 aa13.84□□□□□ -0.19
PAAF1-209ENST00000540659 FOXD1Q16676 465 aa13.84□□□□□ -0.19
PAAF1-209ENST00000540659 MAGI2Q86UL8 1455 aa13.84□□□□□ -0.19
PAAF1-209ENST00000540659 PZPP20742 1482 aa13.83□□□□□ -0.2
PAAF1-209ENST00000540659 ABCA6Q8N139 1617 aa13.82□□□□□ -0.2
PAAF1-209ENST00000540659 SLC4A1APQ9BWU0 796 aaKnown RBP13.82□□□□□ -0.2
PAAF1-209ENST00000540659 DIP2CQ9Y2E4 1556 aa13.82□□□□□ -0.2
PAAF1-209ENST00000540659 KIDINS220Q9ULH0 1771 aa13.81□□□□□ -0.2
PAAF1-209ENST00000540659 ZNF316A6NFI3 1004 aaPredicted RBP13.81□□□□□ -0.2
PAAF1-209ENST00000540659 TONSLQ96HA7 1378 aa13.81□□□□□ -0.2
PAAF1-209ENST00000540659 INO80Q9ULG1 1556 aaPredicted RBP13.8□□□□□ -0.2
PAAF1-209ENST00000540659 KDM4FA0A1W2PPD8 638 aa13.8□□□□□ -0.2
PAAF1-209ENST00000540659 BCORL1Q5H9F3 1711 aa13.8□□□□□ -0.2
PAAF1-209ENST00000540659 DUOX2Q9NRD8 1548 aa13.8□□□□□ -0.2
PAAF1-209ENST00000540659 AFAP1Q8N556 730 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms