RNA–Protein interactions for RNA: ENST00000540651.5

ARF1-213, Transcript of ADP ribosylation factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARF1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-213ENST00000540651 PREX2Q70Z35 1606 aa34.21■■■■□ 3.07
ARF1-213ENST00000540651 ABCA9Q8IUA7 1624 aa34.19■■■■□ 3.06
ARF1-213ENST00000540651 ZNF777Q9ULD5 760 aaPredicted RBP34.18■■■■□ 3.06
ARF1-213ENST00000540651 PLCH2O75038 1416 aa34.17■■■■□ 3.06
ARF1-213ENST00000540651 MYO5CQ9NQX4 1742 aa34.16■■■■□ 3.06
ARF1-213ENST00000540651 CAMSAP2Q08AD1 1489 aa34.16■■■■□ 3.06
ARF1-213ENST00000540651 PTPRKQ15262 1439 aa34.15■■■■□ 3.06
ARF1-213ENST00000540651 ARHGAP5Q13017 1502 aa34.11■■■■□ 3.05
ARF1-213ENST00000540651 SAMD9LQ8IVG5 1584 aa34.09■■■■□ 3.05
ARF1-213ENST00000540651 ABCC5O15440 1437 aa34.03■■■■□ 3.04
ARF1-213ENST00000540651 ARAP3Q8WWN8 1544 aa34.03■■■■□ 3.04
ARF1-213ENST00000540651 DAPK1P53355 1430 aa34.02■■■■□ 3.04
ARF1-213ENST00000540651 DNMT1P26358 1616 aaKnown RBP34.01■■■■□ 3.04
ARF1-213ENST00000540651 CD109Q6YHK3 1445 aa34■■■■□ 3.03
ARF1-213ENST00000540651 EFCAB2Q5VUJ9 269 aa34■■■■□ 3.03
ARF1-213ENST00000540651 DIP2BQ9P265 1576 aa33.99■■■■□ 3.03
ARF1-213ENST00000540651 MBD5Q9P267 1494 aa33.99■■■■□ 3.03
ARF1-213ENST00000540651 HNRNPMP52272 730 aaKnown RBP eCLIP33.99■■■■□ 3.037e-7■■■■□ 22.9
ARF1-213ENST00000540651 GLI2P10070 1586 aa33.97■■■■□ 3.03
ARF1-213ENST00000540651 CHIC2Q9UKJ5 165 aa33.96■■■■□ 3.03
ARF1-213ENST00000540651 ARHGEF12Q9NZN5 1544 aa33.96■■■■□ 3.03
ARF1-213ENST00000540651 FANCAO15360 1455 aa33.95■■■■□ 3.03
ARF1-213ENST00000540651 FAM69CQ0P6D2 419 aa33.94■■■■□ 3.02
ARF1-213ENST00000540651 SYCP2Q9BX26 1530 aa33.94■■■■□ 3.02
ARF1-213ENST00000540651 MAP3K4Q9Y6R4 1608 aa33.92■■■■□ 3.02
ARF1-213ENST00000540651 KIAA1107Q9UPP5 1409 aa33.91■■■■□ 3.02
ARF1-213ENST00000540651 ABCC1P33527 1531 aa33.9■■■■□ 3.02
ARF1-213ENST00000540651 ARHGEF5Q12774 1597 aa33.89■■■■□ 3.02
ARF1-213ENST00000540651 PLEKHH2Q8IVE3 1493 aa33.87■■■■□ 3.01
ARF1-213ENST00000540651 AKNAQ7Z591 1439 aa33.86■■■■□ 3.01
ARF1-213ENST00000540651 CROCC2H7BZ55 1655 aa33.86■■■■□ 3.01
ARF1-213ENST00000540651 RRP7BPQ9NSQ0 103 aa33.83■■■■□ 3.01
ARF1-213ENST00000540651 CCDC141Q6ZP82 1450 aa33.83■■■■□ 3.01
ARF1-213ENST00000540651 SETD5Q9C0A6 1442 aa33.83■■■■□ 3.01
ARF1-213ENST00000540651 HFM1A2PYH4 1435 aa33.82■■■■□ 3
ARF1-213ENST00000540651 KIF13AQ9H1H9 1805 aa33.82■■■■□ 3
ARF1-213ENST00000540651 NAIPQ13075 1403 aa33.81■■■■□ 3
ARF1-213ENST00000540651 TRAPPC8Q9Y2L5 1435 aa33.81■■■■□ 3
ARF1-213ENST00000540651 RAB3GAP2Q9H2M9 1393 aa33.8■■■■□ 3
ARF1-213ENST00000540651 RSPH4AQ5TD94 716 aa33.79■■■■□ 3
ARF1-213ENST00000540651 ADGRL1O94910 1474 aa33.79■■■■□ 3
ARF1-213ENST00000540651 SHANK2Q9UPX8 1470 aa33.79■■■■□ 3
ARF1-213ENST00000540651 ROCK1Q13464 1354 aa33.79■■■■□ 3
ARF1-213ENST00000540651 C9orf84Q5VXU9 1444 aa33.78■■■■□ 3
ARF1-213ENST00000540651 SCAPERQ9BY12 1400 aa33.77■■■■□ 3
ARF1-213ENST00000540651 NCOA1Q15788 1441 aa33.76■■■□□ 2.99
ARF1-213ENST00000540651 TSPY4P0CV99 314 aa33.75■■■□□ 2.99
ARF1-213ENST00000540651 TSPY10P0CW01 314 aa33.75■■■□□ 2.99
ARF1-213ENST00000540651 ADGRL2O95490 1459 aa33.75■■■□□ 2.99
ARF1-213ENST00000540651 PPRC1Q5VV67 1664 aaKnown RBP33.74■■■□□ 2.99
ARF1-213ENST00000540651 AFAP1Q8N556 730 aa33.74■■■□□ 2.99
ARF1-213ENST00000540651 NEO1Q92859 1461 aa33.73■■■□□ 2.99
ARF1-213ENST00000540651 CFAP74Q9C0B2 1584 aa33.72■■■□□ 2.99
ARF1-213ENST00000540651 ADGBQ8N7X0 1667 aa33.71■■■□□ 2.99
ARF1-213ENST00000540651 TSPOAP1O95153 1857 aa33.7■■■□□ 2.99
ARF1-213ENST00000540651 GCC2Q8IWJ2 1684 aa33.69■■■□□ 2.98
ARF1-213ENST00000540651 KDM6BO15054 1643 aa33.68■■■□□ 2.98
ARF1-213ENST00000540651 MAST1Q9Y2H9 1570 aa33.68■■■□□ 2.98
ARF1-213ENST00000540651 ANKRD30AQ9BXX3 1397 aa33.67■■■□□ 2.98
ARF1-213ENST00000540651 POGZQ7Z3K3 1410 aa33.6■■■□□ 2.97
ARF1-213ENST00000540651 SPAG9O60271 1321 aaKnown RBP33.58■■■□□ 2.97
ARF1-213ENST00000540651 KIF15Q9NS87 1388 aa33.58■■■□□ 2.97
ARF1-213ENST00000540651 TEX14Q8IWB6 1497 aa33.57■■■□□ 2.96
ARF1-213ENST00000540651 ZFYVE16Q7Z3T8 1539 aa33.57■■■□□ 2.96
ARF1-213ENST00000540651 ZNF518AQ6AHZ1 1483 aa33.57■■■□□ 2.96
ARF1-213ENST00000540651 RAPGEF3O95398 923 aa33.56■■■□□ 2.96
ARF1-213ENST00000540651 CCER1Q8TC90 406 aaPredicted RBP33.55■■■□□ 2.96
ARF1-213ENST00000540651 DENND4BO75064 1496 aaPredicted RBP33.55■■■□□ 2.96
ARF1-213ENST00000540651 DHX57Q6P158 1386 aaKnown RBP33.55■■■□□ 2.96
ARF1-213ENST00000540651 RTEL1-TNFRSF6BF6WH68 1400 aa33.54■■■□□ 2.96
ARF1-213ENST00000540651 PLXNC1O60486 1568 aa33.54■■■□□ 2.96
ARF1-213ENST00000540651 KDM5CP41229 1560 aa33.53■■■□□ 2.96
ARF1-213ENST00000540651 INO80Q9ULG1 1556 aaPredicted RBP33.53■■■□□ 2.96
ARF1-213ENST00000540651 ANKRD50Q9ULJ7 1429 aa33.51■■■□□ 2.96
ARF1-213ENST00000540651 ATP7AQ04656 1500 aa33.51■■■□□ 2.95
ARF1-213ENST00000540651 TRHP20396 242 aaPredicted RBP33.5■■■□□ 2.95
ARF1-213ENST00000540651 RICTORQ6R327 1708 aa33.48■■■□□ 2.95
ARF1-213ENST00000540651 KIDINS220Q9ULH0 1771 aa33.47■■■□□ 2.95
ARF1-213ENST00000540651 FRMPD1Q5SYB0 1578 aa33.46■■■□□ 2.95
ARF1-213ENST00000540651 COL17A1Q9UMD9 1497 aaPredicted RBP33.45■■■□□ 2.95
ARF1-213ENST00000540651 ZEB1P37275 1124 aaPredicted RBP33.43■■■□□ 2.94
ARF1-213ENST00000540651 MLH3Q9UHC1 1453 aa33.43■■■□□ 2.94
ARF1-213ENST00000540651 DUOX2Q9NRD8 1548 aa33.4■■■□□ 2.94
ARF1-213ENST00000540651 MYT1LQ9UL68 1186 aa33.4■■■□□ 2.94
ARF1-213ENST00000540651 HECW2Q9P2P5 1572 aa33.39■■■□□ 2.94
ARF1-213ENST00000540651 TRIM52Q96A61 297 aa33.37■■■□□ 2.93
ARF1-213ENST00000540651 ERBINQ96RT1 1412 aa33.33■■■□□ 2.93
ARF1-213ENST00000540651 ABCA6Q8N139 1617 aa33.31■■■□□ 2.92
ARF1-213ENST00000540651 ZMYM4Q5VZL5 1548 aa33.31■■■□□ 2.92
ARF1-213ENST00000540651 YEATS2Q9ULM3 1422 aa33.31■■■□□ 2.92
ARF1-213ENST00000540651 DHX29Q7Z478 1369 aaKnown RBP33.3■■■□□ 2.92
ARF1-213ENST00000540651 DIP2CQ9Y2E4 1556 aa33.26■■■□□ 2.92
ARF1-213ENST00000540651 PZPP20742 1482 aa33.26■■■□□ 2.91
ARF1-213ENST00000540651 MPHOSPH9Q99550 1183 aa33.25■■■□□ 2.91
ARF1-213ENST00000540651 A2MP01023 1474 aa33.25■■■□□ 2.91
ARF1-213ENST00000540651 ACIN1Q9UKV3 1341 aaKnown RBP33.23■■■□□ 2.91
ARF1-213ENST00000540651 NUP155O75694 1391 aa33.22■■■□□ 2.91
ARF1-213ENST00000540651 UNC13BO14795 1591 aa33.21■■■□□ 2.91
ARF1-213ENST00000540651 KDM5DQ9BY66 1539 aa33.19■■■□□ 2.9
ARF1-213ENST00000540651 MAGI2Q86UL8 1455 aa33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms