RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 CDC42BPAQ5VT25 1732 aa12.29□□□□□ -0.44
C2CD3-215ENST00000540452 KDM5BQ9UGL1 1544 aa12.29□□□□□ -0.44
C2CD3-215ENST00000540452 PLEKHD1A6NEE1 506 aa12.29□□□□□ -0.44
C2CD3-215ENST00000540452 CROCC2H7BZ55 1655 aa12.29□□□□□ -0.44
C2CD3-215ENST00000540452 GPATCH8Q9UKJ3 1502 aaKnown RBP12.28□□□□□ -0.44
C2CD3-215ENST00000540452 SHANK2Q9UPX8 1470 aa12.27□□□□□ -0.44
C2CD3-215ENST00000540452 PREX2Q70Z35 1606 aa12.27□□□□□ -0.44
C2CD3-215ENST00000540452 ADGBQ8N7X0 1667 aa12.27□□□□□ -0.45
C2CD3-215ENST00000540452 NAIPQ13075 1403 aa12.27□□□□□ -0.45
C2CD3-215ENST00000540452 ADGRL2O95490 1459 aa12.26□□□□□ -0.45
C2CD3-215ENST00000540452 ARHGEF5Q12774 1597 aa12.26□□□□□ -0.45
C2CD3-215ENST00000540452 TIMELESSQ9UNS1 1208 aa12.25□□□□□ -0.45
C2CD3-215ENST00000540452 DAPK1P53355 1430 aa12.25□□□□□ -0.45
C2CD3-215ENST00000540452 CAMSAP2Q08AD1 1489 aa12.25□□□□□ -0.45
C2CD3-215ENST00000540452 ARAP3Q8WWN8 1544 aa12.25□□□□□ -0.45
C2CD3-215ENST00000540452 PTPRKQ15262 1439 aa12.24□□□□□ -0.45
C2CD3-215ENST00000540452 ERCC6L2Q5T890 1561 aa12.24□□□□□ -0.45
C2CD3-215ENST00000540452 ZCCHC11Q5TAX3 1644 aaKnown RBP12.23□□□□□ -0.45
C2CD3-215ENST00000540452 PLEKHH2Q8IVE3 1493 aa12.22□□□□□ -0.45
C2CD3-215ENST00000540452 MYO5CQ9NQX4 1742 aa12.22□□□□□ -0.45
C2CD3-215ENST00000540452 MAPKBP1O60336 1514 aa12.21□□□□□ -0.45
C2CD3-215ENST00000540452 RSPH4AQ5TD94 716 aa12.21□□□□□ -0.45
C2CD3-215ENST00000540452 ABCC5O15440 1437 aa12.2□□□□□ -0.46
C2CD3-215ENST00000540452 CDC42BPBQ9Y5S2 1711 aa12.2□□□□□ -0.46
C2CD3-215ENST00000540452 CFDP1Q9UEE9 299 aaPredicted RBP12.2□□□□□ -0.46
C2CD3-215ENST00000540452 ITGAEP38570 1179 aa12.19□□□□□ -0.46
C2CD3-215ENST00000540452 MAST1Q9Y2H9 1570 aa12.18□□□□□ -0.46
C2CD3-215ENST00000540452 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.18□□□□□ -0.46
C2CD3-215ENST00000540452 KIAA1107Q9UPP5 1409 aa12.18□□□□□ -0.46
C2CD3-215ENST00000540452 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
C2CD3-215ENST00000540452 TTC37Q6PGP7 1564 aa12.15□□□□□ -0.46
C2CD3-215ENST00000540452 NCOA1Q15788 1441 aa12.15□□□□□ -0.46
C2CD3-215ENST00000540452 ANKRD30AQ9BXX3 1397 aa12.15□□□□□ -0.46
C2CD3-215ENST00000540452 SAMD9LQ8IVG5 1584 aa12.14□□□□□ -0.47
C2CD3-215ENST00000540452 ABCA9Q8IUA7 1624 aa12.14□□□□□ -0.47
C2CD3-215ENST00000540452 CCDC141Q6ZP82 1450 aa12.14□□□□□ -0.47
C2CD3-215ENST00000540452 WDR7Q9Y4E6 1490 aa12.14□□□□□ -0.47
C2CD3-215ENST00000540452 PLCH2O75038 1416 aa12.13□□□□□ -0.47
C2CD3-215ENST00000540452 MBD5Q9P267 1494 aa12.13□□□□□ -0.47
C2CD3-215ENST00000540452 PLXNC1O60486 1568 aa12.13□□□□□ -0.47
C2CD3-215ENST00000540452 KDM5DQ9BY66 1539 aa12.11□□□□□ -0.47
C2CD3-215ENST00000540452 ARID3CA6NKF2 412 aa12.11□□□□□ -0.47
C2CD3-215ENST00000540452 ARHGAP5Q13017 1502 aa12.11□□□□□ -0.47
C2CD3-215ENST00000540452 C9orf84Q5VXU9 1444 aa12.11□□□□□ -0.47
C2CD3-215ENST00000540452 CFAP74Q9C0B2 1584 aa12.09□□□□□ -0.47
C2CD3-215ENST00000540452 ABCC1P33527 1531 aa12.08□□□□□ -0.48
C2CD3-215ENST00000540452 TSPY4P0CV99 314 aa12.07□□□□□ -0.48
C2CD3-215ENST00000540452 TSPY10P0CW01 314 aa12.07□□□□□ -0.48
C2CD3-215ENST00000540452 KDM6BO15054 1643 aa12.07□□□□□ -0.48
C2CD3-215ENST00000540452 ZNF644Q9H582 1327 aaPredicted RBP12.07□□□□□ -0.48
C2CD3-215ENST00000540452 RTEL1-TNFRSF6BF6WH68 1400 aa12.06□□□□□ -0.48
C2CD3-215ENST00000540452 SYCP2Q9BX26 1530 aa12.06□□□□□ -0.48
C2CD3-215ENST00000540452 ANKRD50Q9ULJ7 1429 aa12.05□□□□□ -0.48
C2CD3-215ENST00000540452 ZNF316A6NFI3 1004 aaPredicted RBP12.05□□□□□ -0.48
C2CD3-215ENST00000540452 EFCAB2Q5VUJ9 269 aa12.04□□□□□ -0.48
C2CD3-215ENST00000540452 RRP7BPQ9NSQ0 103 aa12.04□□□□□ -0.48
C2CD3-215ENST00000540452 ASXL2Q76L83 1435 aa12.03□□□□□ -0.48
C2CD3-215ENST00000540452 DENND4BO75064 1496 aaPredicted RBP12.03□□□□□ -0.48
C2CD3-215ENST00000540452 UNC13BO14795 1591 aa12.03□□□□□ -0.48
C2CD3-215ENST00000540452 ERBINQ96RT1 1412 aa12.03□□□□□ -0.48
C2CD3-215ENST00000540452 DUOX2Q9NRD8 1548 aa12.02□□□□□ -0.48
C2CD3-215ENST00000540452 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.49
C2CD3-215ENST00000540452 KIF15Q9NS87 1388 aa12.02□□□□□ -0.49
C2CD3-215ENST00000540452 PZPP20742 1482 aa12.01□□□□□ -0.49
C2CD3-215ENST00000540452 NPM1P06748 294 aaKnown RBP eCLIP12□□□□□ -0.49
C2CD3-215ENST00000540452 ZNF777Q9ULD5 760 aaPredicted RBP12□□□□□ -0.49
C2CD3-215ENST00000540452 RPRD2Q5VT52 1461 aaKnown RBP12□□□□□ -0.49
C2CD3-215ENST00000540452 MAGI2Q86UL8 1455 aa12□□□□□ -0.49
C2CD3-215ENST00000540452 MPHOSPH9Q99550 1183 aa11.99□□□□□ -0.49
C2CD3-215ENST00000540452 TONSLQ96HA7 1378 aa11.99□□□□□ -0.49
C2CD3-215ENST00000540452 ANKRD30BQ9BXX2 1392 aa11.99□□□□□ -0.49
C2CD3-215ENST00000540452 FANCAO15360 1455 aa11.99□□□□□ -0.49
C2CD3-215ENST00000540452 EIF2AK4Q9P2K8 1649 aaKnown RBP11.98□□□□□ -0.49
C2CD3-215ENST00000540452 INO80Q9ULG1 1556 aaPredicted RBP11.98□□□□□ -0.49
C2CD3-215ENST00000540452 IQGAP3Q86VI3 1631 aa11.97□□□□□ -0.49
C2CD3-215ENST00000540452 GLI2P10070 1586 aa11.97□□□□□ -0.49
C2CD3-215ENST00000540452 ZFYVE16Q7Z3T8 1539 aa11.96□□□□□ -0.49
C2CD3-215ENST00000540452 PPP1R15AO75807 674 aaPredicted RBP11.96□□□□□ -0.49
C2CD3-215ENST00000540452 TRIM52Q96A61 297 aa11.96□□□□□ -0.49
C2CD3-215ENST00000540452 ARHGEF12Q9NZN5 1544 aa11.96□□□□□ -0.5
C2CD3-215ENST00000540452 NEO1Q92859 1461 aa11.95□□□□□ -0.5
C2CD3-215ENST00000540452 HNRNPMP52272 730 aaKnown RBP eCLIP11.95□□□□□ -0.5
C2CD3-215ENST00000540452 DEPDC5O75140 1603 aa11.95□□□□□ -0.5
C2CD3-215ENST00000540452 ZNF518AQ6AHZ1 1483 aa11.95□□□□□ -0.5
C2CD3-215ENST00000540452 KDM5CP41229 1560 aa11.93□□□□□ -0.5
C2CD3-215ENST00000540452 ATP7AQ04656 1500 aa11.93□□□□□ -0.5
C2CD3-215ENST00000540452 FAM135AQ9P2D6 1515 aa11.93□□□□□ -0.5
C2CD3-215ENST00000540452 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
C2CD3-215ENST00000540452 ATP10AO60312 1499 aa11.93□□□□□ -0.5
C2CD3-215ENST00000540452 ADGRL1O94910 1474 aa11.93□□□□□ -0.5
C2CD3-215ENST00000540452 BCORL1Q5H9F3 1711 aa11.92□□□□□ -0.5
C2CD3-215ENST00000540452 DIEXFQ68CQ4 756 aaKnown RBP11.92□□□□□ -0.5
C2CD3-215ENST00000540452 KCNH8Q96L42 1107 aa11.92□□□□□ -0.5
C2CD3-215ENST00000540452 MAP3K4Q9Y6R4 1608 aa11.92□□□□□ -0.5
C2CD3-215ENST00000540452 TEX14Q8IWB6 1497 aa11.91□□□□□ -0.5
C2CD3-215ENST00000540452 SIN3AQ96ST3 1273 aa11.91□□□□□ -0.5
C2CD3-215ENST00000540452 TRAPPC8Q9Y2L5 1435 aa11.91□□□□□ -0.5
C2CD3-215ENST00000540452 NUP155O75694 1391 aa11.91□□□□□ -0.5
C2CD3-215ENST00000540452 CD109Q6YHK3 1445 aa11.9□□□□□ -0.5
C2CD3-215ENST00000540452 MLH3Q9UHC1 1453 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms