RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 KDM5BQ9UGL1 1544 aa18.98■□□□□ 0.63
BNIP3-202ENST00000540159 PRG4Q92954 1404 aaPredicted RBP18.96■□□□□ 0.63
BNIP3-202ENST00000540159 ADAMTS12P58397 1594 aa18.94■□□□□ 0.62
BNIP3-202ENST00000540159 MRS2Q9HD23 443 aa18.94■□□□□ 0.62
BNIP3-202ENST00000540159 MRC2Q9UBG0 1479 aa18.94■□□□□ 0.62
BNIP3-202ENST00000540159 ARHGEF11O15085 1522 aa18.93■□□□□ 0.62
BNIP3-202ENST00000540159 WDR62O43379 1518 aa18.92■□□□□ 0.62
BNIP3-202ENST00000540159 CDK11AQ9UQ88 783 aaPredicted RBP18.92■□□□□ 0.62
BNIP3-202ENST00000540159 DAPK1P53355 1430 aa18.91■□□□□ 0.62
BNIP3-202ENST00000540159 PLB1Q6P1J6 1458 aa18.91■□□□□ 0.62
BNIP3-202ENST00000540159 ABCC5O15440 1437 aa18.91■□□□□ 0.62
BNIP3-202ENST00000540159 KDM2AQ9Y2K7 1162 aa18.9■□□□□ 0.62
BNIP3-202ENST00000540159 NUP153P49790 1475 aaKnown RBP18.89■□□□□ 0.61
BNIP3-202ENST00000540159 TCOF1Q13428 1488 aaKnown RBP18.89■□□□□ 0.61
BNIP3-202ENST00000540159 DISP1Q96F81 1524 aa18.88■□□□□ 0.61
BNIP3-202ENST00000540159 PKD2Q13563 968 aa18.87■□□□□ 0.61
BNIP3-202ENST00000540159 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
BNIP3-202ENST00000540159 PRKRIP1Q9H875 184 aaPredicted RBP18.86■□□□□ 0.61
BNIP3-202ENST00000540159 MIA2Q96PC5 1412 aa18.86■□□□□ 0.61
BNIP3-202ENST00000540159 RBM19Q9Y4C8 960 aaKnown RBP18.86■□□□□ 0.61
BNIP3-202ENST00000540159 ANKRD30BQ9BXX2 1392 aa18.85■□□□□ 0.61
BNIP3-202ENST00000540159 KIF7Q2M1P5 1343 aa18.85■□□□□ 0.61
BNIP3-202ENST00000540159 CCDC7Q96M83 1385 aa18.84■□□□□ 0.61
BNIP3-202ENST00000540159 JPH4Q96JJ6 628 aa18.83■□□□□ 0.61
BNIP3-202ENST00000540159 GCC2Q8IWJ2 1684 aa18.83■□□□□ 0.6
BNIP3-202ENST00000540159 KIAA0586Q9BVV6 1533 aa18.82■□□□□ 0.6
BNIP3-202ENST00000540159 GRIN2AQ12879 1464 aa18.81■□□□□ 0.6
BNIP3-202ENST00000540159 CNTLNQ9NXG0 1405 aa18.81■□□□□ 0.6
BNIP3-202ENST00000540159 KIAA0556O60303 1618 aa18.81■□□□□ 0.6
BNIP3-202ENST00000540159 HNRNPMP52272 730 aaKnown RBP eCLIP18.8■□□□□ 0.66e-7■■□□□ 13.8
BNIP3-202ENST00000540159 IFT140Q96RY7 1462 aa18.8■□□□□ 0.6
BNIP3-202ENST00000540159 B4GALNT3Q6L9W6 998 aa18.77■□□□□ 0.6
BNIP3-202ENST00000540159 RPRD2Q5VT52 1461 aaKnown RBP18.77■□□□□ 0.59
BNIP3-202ENST00000540159 PLEKHD1A6NEE1 506 aa18.76■□□□□ 0.59
BNIP3-202ENST00000540159 EIF4G3O43432 1585 aaKnown RBP18.76■□□□□ 0.59
BNIP3-202ENST00000540159 CAMSAP2Q08AD1 1489 aa18.76■□□□□ 0.59
BNIP3-202ENST00000540159 RAPGEF6Q8TEU7 1601 aa18.76■□□□□ 0.59
BNIP3-202ENST00000540159 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
BNIP3-202ENST00000540159 KIF14Q15058 1648 aa18.75■□□□□ 0.59
BNIP3-202ENST00000540159 NCOA1Q15788 1441 aa18.75■□□□□ 0.59
BNIP3-202ENST00000540159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.592e-9■■□□□ 12.4
BNIP3-202ENST00000540159 RGL3Q3MIN7 710 aa18.74■□□□□ 0.59
BNIP3-202ENST00000540159 NUP155O75694 1391 aa18.74■□□□□ 0.59
BNIP3-202ENST00000540159 AKNAQ7Z591 1439 aa18.73■□□□□ 0.59
BNIP3-202ENST00000540159 TROQ12816 1431 aaPredicted RBP18.73■□□□□ 0.59
BNIP3-202ENST00000540159 TEX14Q8IWB6 1497 aa18.73■□□□□ 0.59
BNIP3-202ENST00000540159 DNMT1P26358 1616 aaKnown RBP18.72■□□□□ 0.59
BNIP3-202ENST00000540159 GPATCH8Q9UKJ3 1502 aaKnown RBP18.71■□□□□ 0.59
BNIP3-202ENST00000540159 ROCK1Q13464 1354 aa18.71■□□□□ 0.59
BNIP3-202ENST00000540159 DCAF11Q8TEB1 546 aa18.71■□□□□ 0.59
BNIP3-202ENST00000540159 MYT1Q01538 1121 aa18.71■□□□□ 0.59
BNIP3-202ENST00000540159 ANP32EQ9BTT0 268 aa18.71■□□□□ 0.59
BNIP3-202ENST00000540159 CARD11Q9BXL7 1154 aa18.71■□□□□ 0.59
BNIP3-202ENST00000540159 PZPP20742 1482 aa18.71■□□□□ 0.59
BNIP3-202ENST00000540159 USP47Q96K76 1375 aa18.7■□□□□ 0.58
BNIP3-202ENST00000540159 TSPY4P0CV99 314 aa18.7■□□□□ 0.58
BNIP3-202ENST00000540159 TSPY10P0CW01 314 aa18.7■□□□□ 0.58
BNIP3-202ENST00000540159 CEP170Q5SW79 1584 aa18.69■□□□□ 0.58
BNIP3-202ENST00000540159 ANKRD50Q9ULJ7 1429 aa18.67■□□□□ 0.58
BNIP3-202ENST00000540159 ANKRD30AQ9BXX3 1397 aa18.66■□□□□ 0.58
BNIP3-202ENST00000540159 ST20-MTHFSA0A0A6YYL1 179 aa18.66■□□□□ 0.58
BNIP3-202ENST00000540159 CARMIL2Q6F5E8 1435 aa18.64■□□□□ 0.57
BNIP3-202ENST00000540159 SPATA31E1Q6ZUB1 1445 aa18.63■□□□□ 0.57
BNIP3-202ENST00000540159 KIAA1107Q9UPP5 1409 aa18.63■□□□□ 0.57
BNIP3-202ENST00000540159 TMC1Q8TDI8 760 aa18.61■□□□□ 0.57
BNIP3-202ENST00000540159 SYNJ2O15056 1496 aa18.61■□□□□ 0.57
BNIP3-202ENST00000540159 MSH5O43196 834 aa18.61■□□□□ 0.57
BNIP3-202ENST00000540159 ZBED9Q6R2W3 1325 aa18.59■□□□□ 0.57
BNIP3-202ENST00000540159 C9orf84Q5VXU9 1444 aa18.59■□□□□ 0.57
BNIP3-202ENST00000540159 PPP4R2Q9NY27 417 aa18.58■□□□□ 0.56
BNIP3-202ENST00000540159 KIF15Q9NS87 1388 aa18.57■□□□□ 0.56
BNIP3-202ENST00000540159 ATP10BO94823 1461 aa18.57■□□□□ 0.56
BNIP3-202ENST00000540159 BCORL1Q5H9F3 1711 aa18.56■□□□□ 0.56
BNIP3-202ENST00000540159 NBPF1Q3BBV0 1214 aa18.56■□□□□ 0.56
BNIP3-202ENST00000540159 MAGI1Q96QZ7 1491 aaPredicted RBP18.56■□□□□ 0.56
BNIP3-202ENST00000540159 DHX29Q7Z478 1369 aaKnown RBP18.56■□□□□ 0.56
BNIP3-202ENST00000540159 ROCK2O75116 1388 aaKnown RBP18.51■□□□□ 0.55
BNIP3-202ENST00000540159 PTPRGP23470 1445 aa18.51■□□□□ 0.55
BNIP3-202ENST00000540159 CC2D1BQ5T0F9 858 aaKnown RBP18.51■□□□□ 0.55
BNIP3-202ENST00000540159 ITSN2Q9NZM3 1697 aa18.5■□□□□ 0.55
BNIP3-202ENST00000540159 ERICH6Q7L0X2 663 aa18.5■□□□□ 0.55
BNIP3-202ENST00000540159 NUP160Q12769 1436 aa18.47■□□□□ 0.55
BNIP3-202ENST00000540159 CDC42BPAQ5VT25 1732 aa18.47■□□□□ 0.55
BNIP3-202ENST00000540159 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
BNIP3-202ENST00000540159 CCDC136Q96JN2 1154 aa18.46■□□□□ 0.55
BNIP3-202ENST00000540159 MBD5Q9P267 1494 aa18.46■□□□□ 0.55
BNIP3-202ENST00000540159 ADGBQ8N7X0 1667 aa18.45■□□□□ 0.54
BNIP3-202ENST00000540159 NUDCQ9Y266 331 aa18.45■□□□□ 0.54
BNIP3-202ENST00000540159 ADGRL2O95490 1459 aa18.44■□□□□ 0.54
BNIP3-202ENST00000540159 ABCC10Q5T3U5 1492 aa18.44■□□□□ 0.54
BNIP3-202ENST00000540159 MYT1LQ9UL68 1186 aa18.43■□□□□ 0.54
BNIP3-202ENST00000540159 KDM5CP41229 1560 aa18.41■□□□□ 0.54
BNIP3-202ENST00000540159 CROCC2H7BZ55 1655 aa18.41■□□□□ 0.54
BNIP3-202ENST00000540159 CCDC144AA2RUR9 1427 aa18.4■□□□□ 0.54
BNIP3-202ENST00000540159 ABCA8O94911 1581 aa18.39■□□□□ 0.53
BNIP3-202ENST00000540159 CDCA7LQ96GN5 454 aa18.38■□□□□ 0.53
BNIP3-202ENST00000540159 ARHGAP5Q13017 1502 aa18.37■□□□□ 0.53
BNIP3-202ENST00000540159 SYCP2Q9BX26 1530 aa18.37■□□□□ 0.53
BNIP3-202ENST00000540159 RALGAPBQ86X10 1494 aa18.37■□□□□ 0.53
BNIP3-202ENST00000540159 ADCY10Q96PN6 1610 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms