RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 CCNB3Q8WWL7 1395 aa34.65■■■■□ 3.14
TRIM65-202ENST00000540128 ARHGAP5Q13017 1502 aa34.65■■■■□ 3.14
TRIM65-202ENST00000540128 CDC42BPBQ9Y5S2 1711 aa34.64■■■■□ 3.14
TRIM65-202ENST00000540128 PREX2Q70Z35 1606 aa34.63■■■■□ 3.13
TRIM65-202ENST00000540128 RAPGEF3O95398 923 aa34.62■■■■□ 3.13
TRIM65-202ENST00000540128 CDC42BPAQ5VT25 1732 aa34.61■■■■□ 3.13
TRIM65-202ENST00000540128 DENND4BO75064 1496 aaPredicted RBP34.61■■■■□ 3.13
TRIM65-202ENST00000540128 NCOA2Q15596 1464 aa34.61■■■■□ 3.13
TRIM65-202ENST00000540128 ADGRL1O94910 1474 aa34.59■■■■□ 3.13
TRIM65-202ENST00000540128 SUPT6HQ7KZ85 1726 aaKnown RBP34.59■■■■□ 3.13
TRIM65-202ENST00000540128 SCAPERQ9BY12 1400 aa34.58■■■■□ 3.13
TRIM65-202ENST00000540128 CFDP1Q9UEE9 299 aaPredicted RBP34.57■■■■□ 3.12
TRIM65-202ENST00000540128 FRMPD1Q5SYB0 1578 aa34.51■■■■□ 3.12
TRIM65-202ENST00000540128 POGZQ7Z3K3 1410 aa34.49■■■■□ 3.11
TRIM65-202ENST00000540128 RICTORQ6R327 1708 aa34.47■■■■□ 3.11
TRIM65-202ENST00000540128 ZNF777Q9ULD5 760 aaPredicted RBP34.47■■■■□ 3.11
TRIM65-202ENST00000540128 KIAA1107Q9UPP5 1409 aa34.45■■■■□ 3.11
TRIM65-202ENST00000540128 ABCC1P33527 1531 aa34.45■■■■□ 3.1
TRIM65-202ENST00000540128 ARHGEF12Q9NZN5 1544 aa34.45■■■■□ 3.1
TRIM65-202ENST00000540128 ITSN2Q9NZM3 1697 aa34.44■■■■□ 3.1
TRIM65-202ENST00000540128 PLEKHH2Q8IVE3 1493 aa34.43■■■■□ 3.1
TRIM65-202ENST00000540128 SAMD9LQ8IVG5 1584 aa34.43■■■■□ 3.1
TRIM65-202ENST00000540128 ZMYM4Q5VZL5 1548 aa34.41■■■■□ 3.1
TRIM65-202ENST00000540128 AFAP1Q8N556 730 aa34.41■■■■□ 3.1
TRIM65-202ENST00000540128 ZNF518AQ6AHZ1 1483 aa34.39■■■■□ 3.1
TRIM65-202ENST00000540128 ZNF644Q9H582 1327 aaPredicted RBP34.39■■■■□ 3.1
TRIM65-202ENST00000540128 MAGI2Q86UL8 1455 aa34.39■■■■□ 3.1
TRIM65-202ENST00000540128 TRAPPC8Q9Y2L5 1435 aa34.38■■■■□ 3.09
TRIM65-202ENST00000540128 MYOM3Q5VTT5 1437 aa34.37■■■■□ 3.09
TRIM65-202ENST00000540128 HNRNPMP52272 730 aaKnown RBP eCLIP34.36■■■■□ 3.09
TRIM65-202ENST00000540128 MIA2Q96PC5 1412 aa34.35■■■■□ 3.09
TRIM65-202ENST00000540128 KDM5CP41229 1560 aa34.34■■■■□ 3.09
TRIM65-202ENST00000540128 SYCP2Q9BX26 1530 aa34.31■■■■□ 3.08
TRIM65-202ENST00000540128 MBD5Q9P267 1494 aa34.3■■■■□ 3.08
TRIM65-202ENST00000540128 MLH3Q9UHC1 1453 aa34.28■■■■□ 3.08
TRIM65-202ENST00000540128 RSPH4AQ5TD94 716 aa34.27■■■■□ 3.08
TRIM65-202ENST00000540128 CAMSAP2Q08AD1 1489 aa34.27■■■■□ 3.08
TRIM65-202ENST00000540128 ZFYVE16Q7Z3T8 1539 aa34.26■■■■□ 3.08
TRIM65-202ENST00000540128 YEATS2Q9ULM3 1422 aa34.26■■■■□ 3.07
TRIM65-202ENST00000540128 ARHGEF40Q8TER5 1519 aa34.25■■■■□ 3.07
TRIM65-202ENST00000540128 SPAG9O60271 1321 aaKnown RBP34.2■■■■□ 3.07
TRIM65-202ENST00000540128 HECW2Q9P2P5 1572 aa34.19■■■■□ 3.06
TRIM65-202ENST00000540128 FGD6Q6ZV73 1430 aa34.18■■■■□ 3.06
TRIM65-202ENST00000540128 ATP10AO60312 1499 aa34.18■■■■□ 3.06
TRIM65-202ENST00000540128 MYT1LQ9UL68 1186 aa34.15■■■■□ 3.06
TRIM65-202ENST00000540128 ARHGEF5Q12774 1597 aa34.14■■■■□ 3.06
TRIM65-202ENST00000540128 CCDC141Q6ZP82 1450 aa34.14■■■■□ 3.06
TRIM65-202ENST00000540128 PPARGC1BQ86YN6 1023 aaKnown RBP34.12■■■■□ 3.05
TRIM65-202ENST00000540128 KIDINS220Q9ULH0 1771 aa34.12■■■■□ 3.05
TRIM65-202ENST00000540128 TCOF1Q13428 1488 aaKnown RBP34.12■■■■□ 3.05
TRIM65-202ENST00000540128 KDM4FA0A1W2PPD8 638 aa34.11■■■■□ 3.05
TRIM65-202ENST00000540128 RTEL1-TNFRSF6BF6WH68 1400 aa34.11■■■■□ 3.05
TRIM65-202ENST00000540128 C9orf84Q5VXU9 1444 aa34.1■■■■□ 3.05
TRIM65-202ENST00000540128 PTPN23Q9H3S7 1636 aa34.09■■■■□ 3.05
TRIM65-202ENST00000540128 DIP2CQ9Y2E4 1556 aa34.08■■■■□ 3.05
TRIM65-202ENST00000540128 INO80Q9ULG1 1556 aaPredicted RBP34.06■■■■□ 3.04
TRIM65-202ENST00000540128 ATP7AQ04656 1500 aa34.06■■■■□ 3.04
TRIM65-202ENST00000540128 TSPY4P0CV99 314 aa34.06■■■■□ 3.04
TRIM65-202ENST00000540128 TSPY10P0CW01 314 aa34.06■■■■□ 3.04
TRIM65-202ENST00000540128 ABCA6Q8N139 1617 aa34.05■■■■□ 3.04
TRIM65-202ENST00000540128 ARID4BQ4LE39 1312 aaPredicted RBP34.04■■■■□ 3.04
TRIM65-202ENST00000540128 REREQ9P2R6 1566 aa34.04■■■■□ 3.04
TRIM65-202ENST00000540128 SIGLEC1Q9BZZ2 1709 aa33.99■■■■□ 3.03
TRIM65-202ENST00000540128 ABCC5O15440 1437 aa33.98■■■■□ 3.03
TRIM65-202ENST00000540128 AGLP35573 1532 aa33.96■■■■□ 3.03
TRIM65-202ENST00000540128 MAST1Q9Y2H9 1570 aa33.95■■■■□ 3.03
TRIM65-202ENST00000540128 FAM50AQ14320 339 aaKnown RBP33.93■■■■□ 3.02
TRIM65-202ENST00000540128 A2MP01023 1474 aa33.93■■■■□ 3.02
TRIM65-202ENST00000540128 BCORL1Q5H9F3 1711 aa33.93■■■■□ 3.02
TRIM65-202ENST00000540128 DAPK1P53355 1430 aa33.92■■■■□ 3.02
TRIM65-202ENST00000540128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.91■■■■□ 3.022e-7■■■□□ 15.5
TRIM65-202ENST00000540128 ADAMTSL3P82987 1691 aa33.9■■■■□ 3.02
TRIM65-202ENST00000540128 DNMT1P26358 1616 aaKnown RBP33.9■■■■□ 3.02
TRIM65-202ENST00000540128 SHANK2Q9UPX8 1470 aa33.9■■■■□ 3.02
TRIM65-202ENST00000540128 DHX29Q7Z478 1369 aaKnown RBP33.89■■■■□ 3.02
TRIM65-202ENST00000540128 PLXNC1O60486 1568 aa33.87■■■■□ 3.01
TRIM65-202ENST00000540128 ADGBQ8N7X0 1667 aa33.87■■■■□ 3.01
TRIM65-202ENST00000540128 MLECQ14165 292 aa33.84■■■■□ 3.01
TRIM65-202ENST00000540128 RRBP1Q9P2E9 1410 aaKnown RBP33.84■■■■□ 3.01
TRIM65-202ENST00000540128 AEBP2Q6ZN18 517 aaPredicted RBP33.83■■■■□ 3.01
TRIM65-202ENST00000540128 CROCC2H7BZ55 1655 aa33.81■■■■□ 3
TRIM65-202ENST00000540128 CHIC2Q9UKJ5 165 aa33.75■■■□□ 2.99
TRIM65-202ENST00000540128 ANKRD30AQ9BXX3 1397 aa33.74■■■□□ 2.99
TRIM65-202ENST00000540128 NCOA1Q15788 1441 aa33.74■■■□□ 2.99
TRIM65-202ENST00000540128 MADDQ8WXG6 1647 aa33.74■■■□□ 2.99
TRIM65-202ENST00000540128 PTPRKQ15262 1439 aa33.73■■■□□ 2.99
TRIM65-202ENST00000540128 ADGRL2O95490 1459 aa33.73■■■□□ 2.99
TRIM65-202ENST00000540128 KIF15Q9NS87 1388 aa33.72■■■□□ 2.99
TRIM65-202ENST00000540128 RRP7BPQ9NSQ0 103 aa33.72■■■□□ 2.99
TRIM65-202ENST00000540128 PPP6R1Q9UPN7 881 aa33.72■■■□□ 2.99
TRIM65-202ENST00000540128 PTPRMP28827 1452 aa33.71■■■□□ 2.99
TRIM65-202ENST00000540128 DUOX2Q9NRD8 1548 aa33.7■■■□□ 2.99
TRIM65-202ENST00000540128 KIF3BO15066 747 aa33.7■■■□□ 2.99
TRIM65-202ENST00000540128 GGT6Q6P531 493 aa33.66■■■□□ 2.98
TRIM65-202ENST00000540128 ROCK1Q13464 1354 aa33.65■■■□□ 2.98
TRIM65-202ENST00000540128 FER1L4A9Z1Z3 1794 aa33.64■■■□□ 2.98
TRIM65-202ENST00000540128 RIMS1Q86UR5 1692 aaKnown RBP33.62■■■□□ 2.97
TRIM65-202ENST00000540128 ERBINQ96RT1 1412 aa33.62■■■□□ 2.97
TRIM65-202ENST00000540128 CNTLNQ9NXG0 1405 aa33.62■■■□□ 2.97
TRIM65-202ENST00000540128 ESF1Q9H501 851 aaKnown RBP33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms