RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 ASXL2Q76L83 1435 aa10.35□□□□□ -0.75
CDH19-203ENST00000540086 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDH19-203ENST00000540086 TTC37Q6PGP7 1564 aa10.33□□□□□ -0.76
CDH19-203ENST00000540086 CAMSAP2Q08AD1 1489 aa10.33□□□□□ -0.76
CDH19-203ENST00000540086 CCER1Q8TC90 406 aaPredicted RBP10.33□□□□□ -0.76
CDH19-203ENST00000540086 HRCP23327 699 aa10.32□□□□□ -0.76
CDH19-203ENST00000540086 CHIC2Q9UKJ5 165 aa10.32□□□□□ -0.76
CDH19-203ENST00000540086 ITSN2Q9NZM3 1697 aa10.31□□□□□ -0.76
CDH19-203ENST00000540086 ABCC5O15440 1437 aa10.3□□□□□ -0.76
CDH19-203ENST00000540086 DAPK1P53355 1430 aa10.3□□□□□ -0.76
CDH19-203ENST00000540086 SETD5Q9C0A6 1442 aa10.3□□□□□ -0.76
CDH19-203ENST00000540086 RAB3GAP2Q9H2M9 1393 aa10.3□□□□□ -0.76
CDH19-203ENST00000540086 CDC42BPAQ5VT25 1732 aa10.29□□□□□ -0.76
CDH19-203ENST00000540086 ARHGAP5Q13017 1502 aa10.29□□□□□ -0.76
CDH19-203ENST00000540086 PLCH2O75038 1416 aa10.29□□□□□ -0.76
CDH19-203ENST00000540086 HNRNPMP52272 730 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDH19-203ENST00000540086 RRP7BPQ9NSQ0 103 aa10.28□□□□□ -0.76
CDH19-203ENST00000540086 PREX2Q70Z35 1606 aa10.28□□□□□ -0.76
CDH19-203ENST00000540086 HFM1A2PYH4 1435 aa10.27□□□□□ -0.77
CDH19-203ENST00000540086 EFCAB2Q5VUJ9 269 aa10.26□□□□□ -0.77
CDH19-203ENST00000540086 DNMT1P26358 1616 aaKnown RBP10.26□□□□□ -0.77
CDH19-203ENST00000540086 SAMD9LQ8IVG5 1584 aa10.26□□□□□ -0.77
CDH19-203ENST00000540086 NAIPQ13075 1403 aa10.26□□□□□ -0.77
CDH19-203ENST00000540086 AKNAQ7Z591 1439 aa10.25□□□□□ -0.77
CDH19-203ENST00000540086 MBD5Q9P267 1494 aa10.25□□□□□ -0.77
CDH19-203ENST00000540086 CDC42BPBQ9Y5S2 1711 aa10.24□□□□□ -0.77
CDH19-203ENST00000540086 MAPKBP1O60336 1514 aa10.24□□□□□ -0.77
CDH19-203ENST00000540086 DHX57Q6P158 1386 aaKnown RBP10.24□□□□□ -0.77
CDH19-203ENST00000540086 ABCA9Q8IUA7 1624 aa10.24□□□□□ -0.77
CDH19-203ENST00000540086 MYO5CQ9NQX4 1742 aa10.24□□□□□ -0.77
CDH19-203ENST00000540086 SYCP2Q9BX26 1530 aa10.24□□□□□ -0.77
CDH19-203ENST00000540086 ROCK1Q13464 1354 aa10.24□□□□□ -0.77
CDH19-203ENST00000540086 TSPY4P0CV99 314 aa10.23□□□□□ -0.77
CDH19-203ENST00000540086 TSPY10P0CW01 314 aa10.23□□□□□ -0.77
CDH19-203ENST00000540086 C9orf84Q5VXU9 1444 aa10.22□□□□□ -0.77
CDH19-203ENST00000540086 CD109Q6YHK3 1445 aa10.22□□□□□ -0.77
CDH19-203ENST00000540086 KIAA1107Q9UPP5 1409 aa10.22□□□□□ -0.77
CDH19-203ENST00000540086 CCDC141Q6ZP82 1450 aa10.22□□□□□ -0.77
CDH19-203ENST00000540086 PLEKHH2Q8IVE3 1493 aa10.22□□□□□ -0.77
CDH19-203ENST00000540086 ARHGEF12Q9NZN5 1544 aa10.22□□□□□ -0.77
CDH19-203ENST00000540086 FANCAO15360 1455 aa10.22□□□□□ -0.77
CDH19-203ENST00000540086 ARAP3Q8WWN8 1544 aa10.22□□□□□ -0.77
CDH19-203ENST00000540086 ZEB1P37275 1124 aaPredicted RBP10.21□□□□□ -0.77
CDH19-203ENST00000540086 NCOA1Q15788 1441 aa10.21□□□□□ -0.77
CDH19-203ENST00000540086 ARHGEF5Q12774 1597 aa10.21□□□□□ -0.77
CDH19-203ENST00000540086 RSPH4AQ5TD94 716 aa10.21□□□□□ -0.78
CDH19-203ENST00000540086 ANKRD30AQ9BXX3 1397 aa10.21□□□□□ -0.78
CDH19-203ENST00000540086 SHANK2Q9UPX8 1470 aa10.21□□□□□ -0.78
CDH19-203ENST00000540086 ABCC1P33527 1531 aa10.2□□□□□ -0.78
CDH19-203ENST00000540086 ADGRL2O95490 1459 aa10.2□□□□□ -0.78
CDH19-203ENST00000540086 TRAPPC8Q9Y2L5 1435 aa10.2□□□□□ -0.78
CDH19-203ENST00000540086 FAM69CQ0P6D2 419 aa10.19□□□□□ -0.78
CDH19-203ENST00000540086 CROCC2H7BZ55 1655 aa10.18□□□□□ -0.78
CDH19-203ENST00000540086 KDM6BO15054 1643 aa10.18□□□□□ -0.78
CDH19-203ENST00000540086 AFAP1Q8N556 730 aa10.18□□□□□ -0.78
CDH19-203ENST00000540086 ADGRL1O94910 1474 aa10.18□□□□□ -0.78
CDH19-203ENST00000540086 SCAPERQ9BY12 1400 aa10.18□□□□□ -0.78
CDH19-203ENST00000540086 TRIM52Q96A61 297 aa10.17□□□□□ -0.78
CDH19-203ENST00000540086 KIF15Q9NS87 1388 aa10.17□□□□□ -0.78
CDH19-203ENST00000540086 GCC2Q8IWJ2 1684 aa10.17□□□□□ -0.78
CDH19-203ENST00000540086 ANKRD50Q9ULJ7 1429 aa10.15□□□□□ -0.78
CDH19-203ENST00000540086 SPAG9O60271 1321 aaKnown RBP10.15□□□□□ -0.78
CDH19-203ENST00000540086 GLI2P10070 1586 aa10.15□□□□□ -0.78
CDH19-203ENST00000540086 DIP2BQ9P265 1576 aa10.15□□□□□ -0.78
CDH19-203ENST00000540086 ADGBQ8N7X0 1667 aa10.15□□□□□ -0.78
CDH19-203ENST00000540086 CLSPNQ9HAW4 1339 aa10.14□□□□□ -0.79
CDH19-203ENST00000540086 PIAS4Q8N2W9 510 aaPredicted RBP10.14□□□□□ -0.79
CDH19-203ENST00000540086 MAST1Q9Y2H9 1570 aa10.14□□□□□ -0.79
CDH19-203ENST00000540086 DNAJC5Q9H3Z4 198 aa10.14□□□□□ -0.79
CDH19-203ENST00000540086 MAP3K4Q9Y6R4 1608 aa10.13□□□□□ -0.79
CDH19-203ENST00000540086 NEO1Q92859 1461 aa10.12□□□□□ -0.79
CDH19-203ENST00000540086 MYT1LQ9UL68 1186 aa10.12□□□□□ -0.79
CDH19-203ENST00000540086 POGZQ7Z3K3 1410 aa10.11□□□□□ -0.79
CDH19-203ENST00000540086 RAPGEF3O95398 923 aa10.11□□□□□ -0.79
CDH19-203ENST00000540086 MPHOSPH9Q99550 1183 aa10.11□□□□□ -0.79
CDH19-203ENST00000540086 RTEL1-TNFRSF6BF6WH68 1400 aa10.11□□□□□ -0.79
CDH19-203ENST00000540086 CFAP74Q9C0B2 1584 aa10.11□□□□□ -0.79
CDH19-203ENST00000540086 ZNF518AQ6AHZ1 1483 aa10.11□□□□□ -0.79
CDH19-203ENST00000540086 ZFYVE16Q7Z3T8 1539 aa10.1□□□□□ -0.79
CDH19-203ENST00000540086 PLXNC1O60486 1568 aa10.1□□□□□ -0.79
CDH19-203ENST00000540086 SIN3AQ96ST3 1273 aa10.09□□□□□ -0.79
CDH19-203ENST00000540086 SLC4A1APQ9BWU0 796 aaKnown RBP10.09□□□□□ -0.79
CDH19-203ENST00000540086 DENND4BO75064 1496 aaPredicted RBP10.09□□□□□ -0.79
CDH19-203ENST00000540086 ACIN1Q9UKV3 1341 aaKnown RBP10.09□□□□□ -0.79
CDH19-203ENST00000540086 ATP7AQ04656 1500 aa10.09□□□□□ -0.79
CDH19-203ENST00000540086 NUP155O75694 1391 aa10.09□□□□□ -0.79
CDH19-203ENST00000540086 DUOX2Q9NRD8 1548 aa10.08□□□□□ -0.8
CDH19-203ENST00000540086 PZPP20742 1482 aa10.08□□□□□ -0.8
CDH19-203ENST00000540086 KCNA4P22459 653 aa10.08□□□□□ -0.8
CDH19-203ENST00000540086 NEUROD1Q13562 356 aa10.08□□□□□ -0.8
CDH19-203ENST00000540086 INO80Q9ULG1 1556 aaPredicted RBP10.08□□□□□ -0.8
CDH19-203ENST00000540086 ERBINQ96RT1 1412 aa10.07□□□□□ -0.8
CDH19-203ENST00000540086 TEX14Q8IWB6 1497 aa10.07□□□□□ -0.8
CDH19-203ENST00000540086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDH19-203ENST00000540086 KDM5CP41229 1560 aa10.06□□□□□ -0.8
CDH19-203ENST00000540086 MLH3Q9UHC1 1453 aa10.05□□□□□ -0.8
CDH19-203ENST00000540086 PKD2Q13563 968 aa10.05□□□□□ -0.8
CDH19-203ENST00000540086 DHX29Q7Z478 1369 aaKnown RBP10.04□□□□□ -0.8
CDH19-203ENST00000540086 PPRC1Q5VV67 1664 aaKnown RBP10.04□□□□□ -0.8
CDH19-203ENST00000540086 TRHP20396 242 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms