RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 CAMSAP2Q08AD1 1489 aa15.45■□□□□ 0.06
PABPC1P4-201ENST00000539977 HNRNPMP52272 730 aaKnown RBP eCLIP15.44■□□□□ 0.06
PABPC1P4-201ENST00000539977 RAB3GAP2Q9H2M9 1393 aa15.43■□□□□ 0.06
PABPC1P4-201ENST00000539977 ABCC5O15440 1437 aa15.42■□□□□ 0.06
PABPC1P4-201ENST00000539977 SETD5Q9C0A6 1442 aa15.42■□□□□ 0.06
PABPC1P4-201ENST00000539977 DAPK1P53355 1430 aa15.41■□□□□ 0.06
PABPC1P4-201ENST00000539977 CDC42BPAQ5VT25 1732 aa15.41■□□□□ 0.06
PABPC1P4-201ENST00000539977 ARHGAP5Q13017 1502 aa15.4■□□□□ 0.06
PABPC1P4-201ENST00000539977 ITSN2Q9NZM3 1697 aa15.4■□□□□ 0.06
PABPC1P4-201ENST00000539977 PLCH2O75038 1416 aa15.38■□□□□ 0.05
PABPC1P4-201ENST00000539977 EFCAB2Q5VUJ9 269 aa15.37■□□□□ 0.05
PABPC1P4-201ENST00000539977 PREX2Q70Z35 1606 aa15.36■□□□□ 0.05
PABPC1P4-201ENST00000539977 HFM1A2PYH4 1435 aa15.36■□□□□ 0.05
PABPC1P4-201ENST00000539977 NAIPQ13075 1403 aa15.36■□□□□ 0.05
PABPC1P4-201ENST00000539977 CDC42BPBQ9Y5S2 1711 aa15.35■□□□□ 0.05
PABPC1P4-201ENST00000539977 SAMD9LQ8IVG5 1584 aa15.34■□□□□ 0.05
PABPC1P4-201ENST00000539977 MBD5Q9P267 1494 aa15.34■□□□□ 0.05
PABPC1P4-201ENST00000539977 DHX57Q6P158 1386 aaKnown RBP15.33■□□□□ 0.05
PABPC1P4-201ENST00000539977 DNMT1P26358 1616 aaKnown RBP15.33■□□□□ 0.05
PABPC1P4-201ENST00000539977 TSPY4P0CV99 314 aa15.33■□□□□ 0.04
PABPC1P4-201ENST00000539977 TSPY10P0CW01 314 aa15.33■□□□□ 0.04
PABPC1P4-201ENST00000539977 AKNAQ7Z591 1439 aa15.33■□□□□ 0.04
PABPC1P4-201ENST00000539977 SYCP2Q9BX26 1530 aa15.32■□□□□ 0.04
PABPC1P4-201ENST00000539977 ARHGEF12Q9NZN5 1544 aa15.31■□□□□ 0.04
PABPC1P4-201ENST00000539977 MYO5CQ9NQX4 1742 aa15.31■□□□□ 0.04
PABPC1P4-201ENST00000539977 CD109Q6YHK3 1445 aa15.31■□□□□ 0.04
PABPC1P4-201ENST00000539977 ABCA9Q8IUA7 1624 aa15.3■□□□□ 0.04
PABPC1P4-201ENST00000539977 FANCAO15360 1455 aa15.29■□□□□ 0.04
PABPC1P4-201ENST00000539977 FAM69CQ0P6D2 419 aa15.29■□□□□ 0.04
PABPC1P4-201ENST00000539977 ROCK1Q13464 1354 aa15.29■□□□□ 0.04
PABPC1P4-201ENST00000539977 NCOA1Q15788 1441 aa15.29■□□□□ 0.04
PABPC1P4-201ENST00000539977 C9orf84Q5VXU9 1444 aa15.29■□□□□ 0.04
PABPC1P4-201ENST00000539977 ZEB1P37275 1124 aaPredicted RBP15.29■□□□□ 0.04
PABPC1P4-201ENST00000539977 AFAP1Q8N556 730 aa15.29■□□□□ 0.04
PABPC1P4-201ENST00000539977 MAPKBP1O60336 1514 aa15.28■□□□□ 0.04
PABPC1P4-201ENST00000539977 TRIM52Q96A61 297 aa15.27■□□□□ 0.04
PABPC1P4-201ENST00000539977 KIAA1107Q9UPP5 1409 aa15.27■□□□□ 0.04
PABPC1P4-201ENST00000539977 TRAPPC8Q9Y2L5 1435 aa15.27■□□□□ 0.04
PABPC1P4-201ENST00000539977 CCDC141Q6ZP82 1450 aa15.27■□□□□ 0.04
PABPC1P4-201ENST00000539977 RSPH4AQ5TD94 716 aa15.27■□□□□ 0.03
PABPC1P4-201ENST00000539977 ANKRD30AQ9BXX3 1397 aa15.27■□□□□ 0.03
PABPC1P4-201ENST00000539977 KDM6BO15054 1643 aa15.26■□□□□ 0.03
PABPC1P4-201ENST00000539977 PLEKHH2Q8IVE3 1493 aa15.25■□□□□ 0.03
PABPC1P4-201ENST00000539977 ARHGEF5Q12774 1597 aa15.24■□□□□ 0.03
PABPC1P4-201ENST00000539977 SCAPERQ9BY12 1400 aa15.24■□□□□ 0.03
PABPC1P4-201ENST00000539977 ABCC1P33527 1531 aa15.23■□□□□ 0.03
PABPC1P4-201ENST00000539977 ARAP3Q8WWN8 1544 aa15.23■□□□□ 0.03
PABPC1P4-201ENST00000539977 ADGRL1O94910 1474 aa15.23■□□□□ 0.03
PABPC1P4-201ENST00000539977 KIF15Q9NS87 1388 aa15.23■□□□□ 0.03
PABPC1P4-201ENST00000539977 ADGRL2O95490 1459 aa15.22■□□□□ 0.03
PABPC1P4-201ENST00000539977 SHANK2Q9UPX8 1470 aa15.22■□□□□ 0.03
PABPC1P4-201ENST00000539977 MYT1LQ9UL68 1186 aa15.22■□□□□ 0.03
PABPC1P4-201ENST00000539977 CROCC2H7BZ55 1655 aa15.21■□□□□ 0.03
PABPC1P4-201ENST00000539977 SPAG9O60271 1321 aaKnown RBP15.21■□□□□ 0.02
PABPC1P4-201ENST00000539977 ANKRD50Q9ULJ7 1429 aa15.2■□□□□ 0.02
PABPC1P4-201ENST00000539977 DNAJC5Q9H3Z4 198 aa15.19■□□□□ 0.02
PABPC1P4-201ENST00000539977 GCC2Q8IWJ2 1684 aa15.19■□□□□ 0.02
PABPC1P4-201ENST00000539977 RAPGEF3O95398 923 aa15.18■□□□□ 0.02
PABPC1P4-201ENST00000539977 SIN3AQ96ST3 1273 aa15.18■□□□□ 0.02
PABPC1P4-201ENST00000539977 FOXD1Q16676 465 aa15.17■□□□□ 0.02
PABPC1P4-201ENST00000539977 DIP2BQ9P265 1576 aa15.17■□□□□ 0.02
PABPC1P4-201ENST00000539977 NEUROD1Q13562 356 aa15.16■□□□□ 0.02
PABPC1P4-201ENST00000539977 MPHOSPH9Q99550 1183 aa15.16■□□□□ 0.02
PABPC1P4-201ENST00000539977 ADGBQ8N7X0 1667 aa15.16■□□□□ 0.02
PABPC1P4-201ENST00000539977 CLSPNQ9HAW4 1339 aa15.15■□□□□ 0.02
PABPC1P4-201ENST00000539977 GLI2P10070 1586 aa15.14■□□□□ 0.01
PABPC1P4-201ENST00000539977 SLC4A1APQ9BWU0 796 aaKnown RBP15.14■□□□□ 0.01
PABPC1P4-201ENST00000539977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.13■□□□□ 0.01
PABPC1P4-201ENST00000539977 MAP3K4Q9Y6R4 1608 aa15.13■□□□□ 0.01
PABPC1P4-201ENST00000539977 MAST1Q9Y2H9 1570 aa15.12■□□□□ 0.01
PABPC1P4-201ENST00000539977 NUP155O75694 1391 aa15.11■□□□□ 0.01
PABPC1P4-201ENST00000539977 DENND4BO75064 1496 aaPredicted RBP15.11■□□□□ 0.01
PABPC1P4-201ENST00000539977 NEO1Q92859 1461 aa15.11■□□□□ 0.01
PABPC1P4-201ENST00000539977 POGZQ7Z3K3 1410 aa15.11■□□□□ 0.01
PABPC1P4-201ENST00000539977 ZNF518AQ6AHZ1 1483 aa15.1■□□□□ 0.01
PABPC1P4-201ENST00000539977 RTEL1-TNFRSF6BF6WH68 1400 aa15.09■□□□□ 0.01
PABPC1P4-201ENST00000539977 ZFYVE16Q7Z3T8 1539 aa15.09■□□□□ 0.01
PABPC1P4-201ENST00000539977 TRHP20396 242 aaPredicted RBP15.08■□□□□ 0.01
PABPC1P4-201ENST00000539977 ATP7AQ04656 1500 aa15.08■□□□□ 0
PABPC1P4-201ENST00000539977 PZPP20742 1482 aa15.08■□□□□ 0
PABPC1P4-201ENST00000539977 PKD2Q13563 968 aa15.08■□□□□ 0
PABPC1P4-201ENST00000539977 CFAP74Q9C0B2 1584 aa15.07■□□□□ 0
PABPC1P4-201ENST00000539977 TSPOAP1O95153 1857 aa15.07■□□□□ 0
PABPC1P4-201ENST00000539977 PLXNC1O60486 1568 aa15.07■□□□□ 0
PABPC1P4-201ENST00000539977 DUOX2Q9NRD8 1548 aa15.06■□□□□ 0
PABPC1P4-201ENST00000539977 KIF3BO15066 747 aa15.05■□□□□ -0
PABPC1P4-201ENST00000539977 INO80Q9ULG1 1556 aaPredicted RBP15.04■□□□□ -0
PABPC1P4-201ENST00000539977 ACIN1Q9UKV3 1341 aaKnown RBP15.04■□□□□ -0
PABPC1P4-201ENST00000539977 ERBINQ96RT1 1412 aa15.03■□□□□ -0
PABPC1P4-201ENST00000539977 DHX29Q7Z478 1369 aaKnown RBP15.03■□□□□ -0
PABPC1P4-201ENST00000539977 TEX14Q8IWB6 1497 aa15.02■□□□□ -0
PABPC1P4-201ENST00000539977 PPRC1Q5VV67 1664 aaKnown RBP15.02■□□□□ -0
PABPC1P4-201ENST00000539977 KDM5CP41229 1560 aa15.02□□□□□ -0.01
PABPC1P4-201ENST00000539977 MLH3Q9UHC1 1453 aa15.01□□□□□ -0.01
PABPC1P4-201ENST00000539977 KIF13AQ9H1H9 1805 aa15.01□□□□□ -0.01
PABPC1P4-201ENST00000539977 ANKRD30BQ9BXX2 1392 aa15.01□□□□□ -0.01
PABPC1P4-201ENST00000539977 COL17A1Q9UMD9 1497 aaPredicted RBP15.01□□□□□ -0.01
PABPC1P4-201ENST00000539977 KIDINS220Q9ULH0 1771 aa15.01□□□□□ -0.01
PABPC1P4-201ENST00000539977 YEATS2Q9ULM3 1422 aa15□□□□□ -0.01
PABPC1P4-201ENST00000539977 A2MP01023 1474 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms