RNA–Protein interactions for RNA: ENST00000539814.5

LDHA-217, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-217ENST00000539814 IQGAP2Q13576 1575 aa12.81□□□□□ -0.36
LDHA-217ENST00000539814 KIAA0586Q9BVV6 1533 aa12.81□□□□□ -0.36
LDHA-217ENST00000539814 SHROOM2Q13796 1616 aa12.8□□□□□ -0.36
LDHA-217ENST00000539814 RANGAP1P46060 587 aaPredicted RBP12.8□□□□□ -0.36
LDHA-217ENST00000539814 UBTFP17480 764 aaKnown RBP12.79□□□□□ -0.36
LDHA-217ENST00000539814 DNAJC5Q9H3Z4 198 aa12.79□□□□□ -0.36
LDHA-217ENST00000539814 RIMBP3CA6NJZ7 1639 aa12.78□□□□□ -0.36
LDHA-217ENST00000539814 RIMBP3BA6NNM3 1639 aa12.78□□□□□ -0.36
LDHA-217ENST00000539814 RIMBP3Q9UFD9 1639 aa12.78□□□□□ -0.36
LDHA-217ENST00000539814 LOC105371045A0A1W2PR82 267 aa12.78□□□□□ -0.36
LDHA-217ENST00000539814 ARHGEF11O15085 1522 aa12.78□□□□□ -0.36
LDHA-217ENST00000539814 MIER1Q8N108 512 aa12.77□□□□□ -0.37
LDHA-217ENST00000539814 CIZ1Q9ULV3 898 aaPredicted RBP12.76□□□□□ -0.37
LDHA-217ENST00000539814 PRG4Q92954 1404 aaPredicted RBP12.76□□□□□ -0.37
LDHA-217ENST00000539814 JPH4Q96JJ6 628 aa12.75□□□□□ -0.37
LDHA-217ENST00000539814 UGGT2Q9NYU1 1516 aa12.72□□□□□ -0.37
LDHA-217ENST00000539814 TTBK1Q5TCY1 1321 aaPredicted RBP12.72□□□□□ -0.37
LDHA-217ENST00000539814 DISP1Q96F81 1524 aa12.72□□□□□ -0.37
LDHA-217ENST00000539814 KIAA0556O60303 1618 aa12.71□□□□□ -0.37
LDHA-217ENST00000539814 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
LDHA-217ENST00000539814 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
LDHA-217ENST00000539814 P3H3Q8IVL6 736 aa12.7□□□□□ -0.38
LDHA-217ENST00000539814 ARAP1Q96P48 1450 aa12.7□□□□□ -0.38
LDHA-217ENST00000539814 TIMELESSQ9UNS1 1208 aa12.69□□□□□ -0.38
LDHA-217ENST00000539814 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
LDHA-217ENST00000539814 SAMD9Q5K651 1589 aa12.68□□□□□ -0.38
LDHA-217ENST00000539814 HS6ST3Q8IZP7 471 aa12.67□□□□□ -0.38
LDHA-217ENST00000539814 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
LDHA-217ENST00000539814 FHOD3Q2V2M9 1422 aa12.65□□□□□ -0.38
LDHA-217ENST00000539814 CARMIL2Q6F5E8 1435 aa12.65□□□□□ -0.38
LDHA-217ENST00000539814 CYB5RLQ6IPT4 315 aa12.65□□□□□ -0.38
LDHA-217ENST00000539814 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
LDHA-217ENST00000539814 TULP1O00294 542 aaPredicted RBP12.64□□□□□ -0.39
LDHA-217ENST00000539814 ARHGAP35Q9NRY4 1499 aa12.64□□□□□ -0.39
LDHA-217ENST00000539814 EFCAB5A4FU69 1503 aa12.62□□□□□ -0.39
LDHA-217ENST00000539814 CLIP1P30622 1438 aa12.62□□□□□ -0.39
LDHA-217ENST00000539814 CEP162Q5TB80 1403 aa12.62□□□□□ -0.39
LDHA-217ENST00000539814 PTPRGP23470 1445 aa12.6□□□□□ -0.39
LDHA-217ENST00000539814 ADCY10Q96PN6 1610 aa12.58□□□□□ -0.4
LDHA-217ENST00000539814 PLB1Q6P1J6 1458 aa12.58□□□□□ -0.4
LDHA-217ENST00000539814 GTF3C3Q9Y5Q9 886 aa12.57□□□□□ -0.4
LDHA-217ENST00000539814 ARID3CA6NKF2 412 aa12.56□□□□□ -0.4
LDHA-217ENST00000539814 HAX1O00165 279 aa12.54□□□□□ -0.4
LDHA-217ENST00000539814 PELP1Q8IZL8 1130 aaKnown RBP12.54□□□□□ -0.4
LDHA-217ENST00000539814 ABCA8O94911 1581 aa12.54□□□□□ -0.4
LDHA-217ENST00000539814 C19orf67A6NJJ6 358 aa12.53□□□□□ -0.4
LDHA-217ENST00000539814 RNF25Q96BH1 459 aaPredicted RBP12.53□□□□□ -0.4
LDHA-217ENST00000539814 UACAQ9BZF9 1416 aa12.53□□□□□ -0.4
LDHA-217ENST00000539814 PCF11O94913 1555 aaKnown RBP12.52□□□□□ -0.4
LDHA-217ENST00000539814 RAPGEF6Q8TEU7 1601 aa12.52□□□□□ -0.4
LDHA-217ENST00000539814 ABCC2Q92887 1545 aa12.52□□□□□ -0.41
LDHA-217ENST00000539814 MYT1Q01538 1121 aa12.51□□□□□ -0.41
LDHA-217ENST00000539814 LRRIQ1Q96JM4 1722 aa12.49□□□□□ -0.41
LDHA-217ENST00000539814 NKX1-1Q15270 411 aaPredicted RBP12.49□□□□□ -0.41
LDHA-217ENST00000539814 ATP1B4Q9UN42 357 aaPredicted RBP12.49□□□□□ -0.41
LDHA-217ENST00000539814 ZCCHC11Q5TAX3 1644 aaKnown RBP12.48□□□□□ -0.41
LDHA-217ENST00000539814 NUP153P49790 1475 aaKnown RBP12.48□□□□□ -0.41
LDHA-217ENST00000539814 CD44P16070 742 aaKnown RBP12.48□□□□□ -0.41
LDHA-217ENST00000539814 UHRF1BP1LA0JNW5 1464 aa12.47□□□□□ -0.41
LDHA-217ENST00000539814 FMN1Q68DA7 1419 aa12.47□□□□□ -0.41
LDHA-217ENST00000539814 NUBP1P53384 320 aa12.47□□□□□ -0.41
LDHA-217ENST00000539814 CDK13Q14004 1512 aaKnown RBP12.47□□□□□ -0.41
LDHA-217ENST00000539814 GSE1Q14687 1217 aa12.46□□□□□ -0.41
LDHA-217ENST00000539814 ERICH6Q7L0X2 663 aa12.46□□□□□ -0.41
LDHA-217ENST00000539814 HECW1Q76N89 1606 aa12.45□□□□□ -0.42
LDHA-217ENST00000539814 GTPBP6O43824 516 aaPredicted RBP12.45□□□□□ -0.42
LDHA-217ENST00000539814 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
LDHA-217ENST00000539814 KDM5BQ9UGL1 1544 aa12.44□□□□□ -0.42
LDHA-217ENST00000539814 EVX2Q03828 476 aa12.44□□□□□ -0.42
LDHA-217ENST00000539814 CASKIN1Q8WXD9 1431 aa12.44□□□□□ -0.42
LDHA-217ENST00000539814 ATP10BO94823 1461 aa12.43□□□□□ -0.42
LDHA-217ENST00000539814 VPS8Q8N3P4 1428 aa12.43□□□□□ -0.42
LDHA-217ENST00000539814 FYCO1Q9BQS8 1478 aa12.42□□□□□ -0.42
LDHA-217ENST00000539814 RIOK3O14730 519 aaKnown RBP12.42□□□□□ -0.42
LDHA-217ENST00000539814 EPRSP07814 1512 aaKnown RBP12.42□□□□□ -0.42
LDHA-217ENST00000539814 ARXQ96QS3 562 aa12.41□□□□□ -0.42
LDHA-217ENST00000539814 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
LDHA-217ENST00000539814 TMEM132AQ24JP5 1023 aa12.4□□□□□ -0.42
LDHA-217ENST00000539814 ASXL2Q76L83 1435 aa12.39□□□□□ -0.43
LDHA-217ENST00000539814 TSPYL2Q9H2G4 693 aaPredicted RBP12.39□□□□□ -0.43
LDHA-217ENST00000539814 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
LDHA-217ENST00000539814 MAPKBP1O60336 1514 aa12.38□□□□□ -0.43
LDHA-217ENST00000539814 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
LDHA-217ENST00000539814 MAGI3Q5TCQ9 1506 aa12.37□□□□□ -0.43
LDHA-217ENST00000539814 CFAP43Q8NDM7 1665 aa12.36□□□□□ -0.43
LDHA-217ENST00000539814 STK25O00506 426 aa12.36□□□□□ -0.43
LDHA-217ENST00000539814 CCDC18Q5T9S5 1454 aa12.35□□□□□ -0.43
LDHA-217ENST00000539814 WDR7Q9Y4E6 1490 aa12.35□□□□□ -0.43
LDHA-217ENST00000539814 DIP2BQ9P265 1576 aa12.35□□□□□ -0.43
LDHA-217ENST00000539814 KIF13AQ9H1H9 1805 aa12.34□□□□□ -0.43
LDHA-217ENST00000539814 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
LDHA-217ENST00000539814 TIAM1Q13009 1591 aa12.34□□□□□ -0.43
LDHA-217ENST00000539814 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
LDHA-217ENST00000539814 KIF14Q15058 1648 aa12.33□□□□□ -0.44
LDHA-217ENST00000539814 DCAF8Q5TAQ9 597 aa12.32□□□□□ -0.44
LDHA-217ENST00000539814 VGFO15240 615 aaPredicted RBP12.31□□□□□ -0.44
LDHA-217ENST00000539814 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
LDHA-217ENST00000539814 ABCC10Q5T3U5 1492 aa12.31□□□□□ -0.44
LDHA-217ENST00000539814 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
LDHA-217ENST00000539814 TSPOAP1O95153 1857 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms