RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 DNMT1P26358 1616 aaKnown RBP18.26■□□□□ 0.51
UBE3B-209ENST00000539584 FANCIQ9NVI1 1328 aa18.25■□□□□ 0.51
UBE3B-209ENST00000539584 KDM6BO15054 1643 aa18.25■□□□□ 0.51
UBE3B-209ENST00000539584 PRKRIP1Q9H875 184 aaPredicted RBP18.25■□□□□ 0.51
UBE3B-209ENST00000539584 TEX14Q8IWB6 1497 aa18.24■□□□□ 0.51
UBE3B-209ENST00000539584 CDK13Q14004 1512 aaKnown RBP18.23■□□□□ 0.51
UBE3B-209ENST00000539584 ZBED9Q6R2W3 1325 aa18.23■□□□□ 0.51
UBE3B-209ENST00000539584 SPATA31E1Q6ZUB1 1445 aa18.23■□□□□ 0.51
UBE3B-209ENST00000539584 PPP4R2Q9NY27 417 aa18.23■□□□□ 0.51
UBE3B-209ENST00000539584 POLR1AO95602 1720 aaPredicted RBP18.22■□□□□ 0.51
UBE3B-209ENST00000539584 ABCC5O15440 1437 aa18.22■□□□□ 0.51
UBE3B-209ENST00000539584 KIAA0586Q9BVV6 1533 aa18.21■□□□□ 0.51
UBE3B-209ENST00000539584 ARID4BQ4LE39 1312 aaPredicted RBP18.19■□□□□ 0.5
UBE3B-209ENST00000539584 MRC2Q9UBG0 1479 aa18.18■□□□□ 0.5
UBE3B-209ENST00000539584 KIAA0556O60303 1618 aa18.17■□□□□ 0.5
UBE3B-209ENST00000539584 IFT140Q96RY7 1462 aa18.16■□□□□ 0.5
UBE3B-209ENST00000539584 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
UBE3B-209ENST00000539584 MRS2Q9HD23 443 aa18.15■□□□□ 0.5
UBE3B-209ENST00000539584 DISP1Q96F81 1524 aa18.14■□□□□ 0.49
UBE3B-209ENST00000539584 NUP153P49790 1475 aaKnown RBP18.14■□□□□ 0.49
UBE3B-209ENST00000539584 RAPGEF6Q8TEU7 1601 aa18.14■□□□□ 0.49
UBE3B-209ENST00000539584 C11orf95C9JLR9 678 aaPredicted RBP18.13■□□□□ 0.49
UBE3B-209ENST00000539584 NBPF8Q3BBV2 869 aa18.13■□□□□ 0.49
UBE3B-209ENST00000539584 KIF7Q2M1P5 1343 aa18.13■□□□□ 0.49
UBE3B-209ENST00000539584 ADGRL2O95490 1459 aa18.12■□□□□ 0.49
UBE3B-209ENST00000539584 TROQ12816 1431 aaPredicted RBP18.11■□□□□ 0.49
UBE3B-209ENST00000539584 ITSN2Q9NZM3 1697 aa18.11■□□□□ 0.49
UBE3B-209ENST00000539584 MBD5Q9P267 1494 aa18.1■□□□□ 0.49
UBE3B-209ENST00000539584 ADGBQ8N7X0 1667 aa18.09■□□□□ 0.49
UBE3B-209ENST00000539584 PZPP20742 1482 aa18.09■□□□□ 0.49
UBE3B-209ENST00000539584 KIAA1107Q9UPP5 1409 aa18.09■□□□□ 0.49
UBE3B-209ENST00000539584 FOXD1Q16676 465 aa18.08■□□□□ 0.49
UBE3B-209ENST00000539584 CCDC184Q52MB2 194 aa18.08■□□□□ 0.49
UBE3B-209ENST00000539584 ROCK2O75116 1388 aaKnown RBP18.08■□□□□ 0.49
UBE3B-209ENST00000539584 FAM9BQ8IZU0 186 aa18.08■□□□□ 0.48
UBE3B-209ENST00000539584 MYT1LQ9UL68 1186 aa18.08■□□□□ 0.48
UBE3B-209ENST00000539584 ADCY10Q96PN6 1610 aa18.07■□□□□ 0.48
UBE3B-209ENST00000539584 CAMSAP2Q08AD1 1489 aa18.06■□□□□ 0.48
UBE3B-209ENST00000539584 SMG6Q86US8 1419 aaKnown RBP18.06■□□□□ 0.48
UBE3B-209ENST00000539584 GRIN2AQ12879 1464 aa18.05■□□□□ 0.48
UBE3B-209ENST00000539584 UHRF1BP1Q6BDS2 1440 aa18.04■□□□□ 0.48
UBE3B-209ENST00000539584 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
UBE3B-209ENST00000539584 CFDP1Q9UEE9 299 aaPredicted RBP18.04■□□□□ 0.48
UBE3B-209ENST00000539584 KIF14Q15058 1648 aa18.04■□□□□ 0.48
UBE3B-209ENST00000539584 MSH5O43196 834 aa18.03■□□□□ 0.48
UBE3B-209ENST00000539584 GPATCH8Q9UKJ3 1502 aaKnown RBP18.03■□□□□ 0.48
UBE3B-209ENST00000539584 DHX29Q7Z478 1369 aaKnown RBP18.03■□□□□ 0.48
UBE3B-209ENST00000539584 IRX6P78412 446 aaPredicted RBP18.03■□□□□ 0.48
UBE3B-209ENST00000539584 ZNF644Q9H582 1327 aaPredicted RBP18.02■□□□□ 0.48
UBE3B-209ENST00000539584 KTN1Q86UP2 1357 aaKnown RBP18.02■□□□□ 0.48
UBE3B-209ENST00000539584 USP47Q96K76 1375 aa18.02■□□□□ 0.47
UBE3B-209ENST00000539584 ERICH6Q7L0X2 663 aa18.01■□□□□ 0.47
UBE3B-209ENST00000539584 CROCC2H7BZ55 1655 aa18.01■□□□□ 0.47
UBE3B-209ENST00000539584 SHANK2Q9UPX8 1470 aa18■□□□□ 0.47
UBE3B-209ENST00000539584 ARHGEF12Q9NZN5 1544 aa18■□□□□ 0.47
UBE3B-209ENST00000539584 RNF123Q5XPI4 1314 aa18■□□□□ 0.47
UBE3B-209ENST00000539584 MAGI1Q96QZ7 1491 aaPredicted RBP17.99■□□□□ 0.47
UBE3B-209ENST00000539584 KDM5CP41229 1560 aa17.98■□□□□ 0.47
UBE3B-209ENST00000539584 RALGAPBQ86X10 1494 aa17.98■□□□□ 0.47
UBE3B-209ENST00000539584 NUDCQ9Y266 331 aa17.98■□□□□ 0.47
UBE3B-209ENST00000539584 PRG4Q92954 1404 aaPredicted RBP17.98■□□□□ 0.47
UBE3B-209ENST00000539584 ZNF608Q9ULD9 1512 aaPredicted RBP17.97■□□□□ 0.47
UBE3B-209ENST00000539584 ARID3CA6NKF2 412 aa17.97■□□□□ 0.47
UBE3B-209ENST00000539584 CARMIL2Q6F5E8 1435 aa17.97■□□□□ 0.47
UBE3B-209ENST00000539584 ANKRD50Q9ULJ7 1429 aa17.97■□□□□ 0.47
UBE3B-209ENST00000539584 KDM5DQ9BY66 1539 aa17.96■□□□□ 0.47
UBE3B-209ENST00000539584 PKD2Q13563 968 aa17.94■□□□□ 0.46
UBE3B-209ENST00000539584 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
UBE3B-209ENST00000539584 KIF15Q9NS87 1388 aa17.92■□□□□ 0.46
UBE3B-209ENST00000539584 B4GALNT3Q6L9W6 998 aa17.92■□□□□ 0.46
UBE3B-209ENST00000539584 BCORL1Q5H9F3 1711 aa17.92■□□□□ 0.46
UBE3B-209ENST00000539584 EIF4G3O43432 1585 aaKnown RBP17.92■□□□□ 0.46
UBE3B-209ENST00000539584 SYNJ2O15056 1496 aa17.91■□□□□ 0.46
UBE3B-209ENST00000539584 PNISRQ8TF01 805 aaKnown RBP17.9■□□□□ 0.46
UBE3B-209ENST00000539584 BRD4O60885 1362 aaPredicted RBP17.89■□□□□ 0.46
UBE3B-209ENST00000539584 RALBP1Q15311 655 aa17.89■□□□□ 0.46
UBE3B-209ENST00000539584 PLB1Q6P1J6 1458 aa17.89■□□□□ 0.45
UBE3B-209ENST00000539584 BCL11AQ9H165 835 aa17.89■□□□□ 0.45
UBE3B-209ENST00000539584 PTPRGP23470 1445 aa17.88■□□□□ 0.45
UBE3B-209ENST00000539584 LRPPRCP42704 1394 aaKnown RBP17.87■□□□□ 0.45
UBE3B-209ENST00000539584 C9orf84Q5VXU9 1444 aa17.87■□□□□ 0.45
UBE3B-209ENST00000539584 PLEKHD1A6NEE1 506 aa17.87■□□□□ 0.45
UBE3B-209ENST00000539584 TMC1Q8TDI8 760 aa17.87■□□□□ 0.45
UBE3B-209ENST00000539584 NUP155O75694 1391 aa17.87■□□□□ 0.45
UBE3B-209ENST00000539584 NUP160Q12769 1436 aa17.86■□□□□ 0.45
UBE3B-209ENST00000539584 ABCC10Q5T3U5 1492 aa17.86■□□□□ 0.45
UBE3B-209ENST00000539584 CEP170Q5SW79 1584 aa17.86■□□□□ 0.45
UBE3B-209ENST00000539584 CARD11Q9BXL7 1154 aa17.86■□□□□ 0.45
UBE3B-209ENST00000539584 TSPY4P0CV99 314 aa17.85■□□□□ 0.45
UBE3B-209ENST00000539584 TSPY10P0CW01 314 aa17.85■□□□□ 0.45
UBE3B-209ENST00000539584 CHMP7Q8WUX9 453 aaPredicted RBP17.85■□□□□ 0.45
UBE3B-209ENST00000539584 ARHGEF5Q12774 1597 aa17.85■□□□□ 0.45
UBE3B-209ENST00000539584 RSPH4AQ5TD94 716 aa17.84■□□□□ 0.45
UBE3B-209ENST00000539584 MYBBP1AQ9BQG0 1328 aaKnown RBP17.84■□□□□ 0.45
UBE3B-209ENST00000539584 ZNF777Q9ULD5 760 aaPredicted RBP17.84■□□□□ 0.45
UBE3B-209ENST00000539584 ABCA8O94911 1581 aa17.83■□□□□ 0.45
UBE3B-209ENST00000539584 CCDC136Q96JN2 1154 aa17.83■□□□□ 0.45
UBE3B-209ENST00000539584 CDC42BPAQ5VT25 1732 aa17.82■□□□□ 0.44
UBE3B-209ENST00000539584 INSRP06213 1382 aa17.82■□□□□ 0.44
UBE3B-209ENST00000539584 JPH4Q96JJ6 628 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms