RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 KCNH8Q96L42 1107 aa13.3□□□□□ -0.28
DDB1-213ENST00000539332 GPATCH8Q9UKJ3 1502 aaKnown RBP13.28□□□□□ -0.28
DDB1-213ENST00000539332 MYO5CQ9NQX4 1742 aa13.27□□□□□ -0.28
DDB1-213ENST00000539332 PREX2Q70Z35 1606 aa13.26□□□□□ -0.29
DDB1-213ENST00000539332 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
DDB1-213ENST00000539332 CDC42BPBQ9Y5S2 1711 aa13.26□□□□□ -0.29
DDB1-213ENST00000539332 ABCA9Q8IUA7 1624 aa13.26□□□□□ -0.29
DDB1-213ENST00000539332 FAM50AQ14320 339 aaKnown RBP13.23□□□□□ -0.29
DDB1-213ENST00000539332 CFDP1Q9UEE9 299 aaPredicted RBP13.23□□□□□ -0.29
DDB1-213ENST00000539332 DNMT1P26358 1616 aaKnown RBP13.22□□□□□ -0.29
DDB1-213ENST00000539332 GCC2Q8IWJ2 1684 aa13.22□□□□□ -0.29
DDB1-213ENST00000539332 CROCC2H7BZ55 1655 aa13.22□□□□□ -0.29
DDB1-213ENST00000539332 PLCH2O75038 1416 aa13.2□□□□□ -0.3
DDB1-213ENST00000539332 ARHGAP5Q13017 1502 aa13.2□□□□□ -0.3
DDB1-213ENST00000539332 ZNF644Q9H582 1327 aaPredicted RBP13.2□□□□□ -0.3
DDB1-213ENST00000539332 PTPRKQ15262 1439 aa13.19□□□□□ -0.3
DDB1-213ENST00000539332 AKNAQ7Z591 1439 aa13.19□□□□□ -0.3
DDB1-213ENST00000539332 CAMSAP2Q08AD1 1489 aa13.19□□□□□ -0.3
DDB1-213ENST00000539332 ARAP3Q8WWN8 1544 aa13.19□□□□□ -0.3
DDB1-213ENST00000539332 DIP2BQ9P265 1576 aa13.19□□□□□ -0.3
DDB1-213ENST00000539332 GLI2P10070 1586 aa13.18□□□□□ -0.3
DDB1-213ENST00000539332 SETD5Q9C0A6 1442 aa13.18□□□□□ -0.3
DDB1-213ENST00000539332 ZNF777Q9ULD5 760 aaPredicted RBP13.18□□□□□ -0.3
DDB1-213ENST00000539332 SAMD9LQ8IVG5 1584 aa13.18□□□□□ -0.3
DDB1-213ENST00000539332 AMER1Q5JTC6 1135 aaPredicted RBP13.17□□□□□ -0.3
DDB1-213ENST00000539332 CCER1Q8TC90 406 aaPredicted RBP13.17□□□□□ -0.3
DDB1-213ENST00000539332 ADGBQ8N7X0 1667 aa13.17□□□□□ -0.3
DDB1-213ENST00000539332 MAP3K4Q9Y6R4 1608 aa13.17□□□□□ -0.3
DDB1-213ENST00000539332 HFM1A2PYH4 1435 aa13.17□□□□□ -0.3
DDB1-213ENST00000539332 ITGAEP38570 1179 aa13.17□□□□□ -0.3
DDB1-213ENST00000539332 KIF13AQ9H1H9 1805 aa13.16□□□□□ -0.3
DDB1-213ENST00000539332 RAB3GAP2Q9H2M9 1393 aa13.16□□□□□ -0.3
DDB1-213ENST00000539332 CD109Q6YHK3 1445 aa13.16□□□□□ -0.3
DDB1-213ENST00000539332 DHX57Q6P158 1386 aaKnown RBP13.15□□□□□ -0.3
DDB1-213ENST00000539332 EFCAB2Q5VUJ9 269 aa13.15□□□□□ -0.31
DDB1-213ENST00000539332 CLSPNQ9HAW4 1339 aa13.14□□□□□ -0.31
DDB1-213ENST00000539332 FANCAO15360 1455 aa13.14□□□□□ -0.31
DDB1-213ENST00000539332 DAPK1P53355 1430 aa13.14□□□□□ -0.31
DDB1-213ENST00000539332 MYT1Q01538 1121 aa13.13□□□□□ -0.31
DDB1-213ENST00000539332 FAM69CQ0P6D2 419 aa13.13□□□□□ -0.31
DDB1-213ENST00000539332 NAIPQ13075 1403 aa13.13□□□□□ -0.31
DDB1-213ENST00000539332 ARHGEF5Q12774 1597 aa13.13□□□□□ -0.31
DDB1-213ENST00000539332 SYCP2Q9BX26 1530 aa13.12□□□□□ -0.31
DDB1-213ENST00000539332 PLEKHH2Q8IVE3 1493 aa13.12□□□□□ -0.31
DDB1-213ENST00000539332 ABCC5O15440 1437 aa13.12□□□□□ -0.31
DDB1-213ENST00000539332 ABCC1P33527 1531 aa13.12□□□□□ -0.31
DDB1-213ENST00000539332 TSPOAP1O95153 1857 aa13.11□□□□□ -0.31
DDB1-213ENST00000539332 MBD5Q9P267 1494 aa13.11□□□□□ -0.31
DDB1-213ENST00000539332 CFAP74Q9C0B2 1584 aa13.11□□□□□ -0.31
DDB1-213ENST00000539332 KIAA1107Q9UPP5 1409 aa13.11□□□□□ -0.31
DDB1-213ENST00000539332 ROCK1Q13464 1354 aa13.11□□□□□ -0.31
DDB1-213ENST00000539332 HNRNPMP52272 730 aaKnown RBP eCLIP13.1□□□□□ -0.311e-6■■■□□ 14.6
DDB1-213ENST00000539332 ADGRL2O95490 1459 aa13.1□□□□□ -0.31
DDB1-213ENST00000539332 SHANK2Q9UPX8 1470 aa13.1□□□□□ -0.31
DDB1-213ENST00000539332 ARHGEF12Q9NZN5 1544 aa13.1□□□□□ -0.31
DDB1-213ENST00000539332 PHF23Q9BUL5 403 aaPredicted RBP13.09□□□□□ -0.31
DDB1-213ENST00000539332 PPRC1Q5VV67 1664 aaKnown RBP13.09□□□□□ -0.31
DDB1-213ENST00000539332 CCDC141Q6ZP82 1450 aa13.08□□□□□ -0.32
DDB1-213ENST00000539332 ADGRL1O94910 1474 aa13.08□□□□□ -0.32
DDB1-213ENST00000539332 NEO1Q92859 1461 aa13.07□□□□□ -0.32
DDB1-213ENST00000539332 RSPH4AQ5TD94 716 aa13.07□□□□□ -0.32
DDB1-213ENST00000539332 KDM6BO15054 1643 aa13.06□□□□□ -0.32
DDB1-213ENST00000539332 CHIC2Q9UKJ5 165 aa13.06□□□□□ -0.32
DDB1-213ENST00000539332 MAST1Q9Y2H9 1570 aa13.05□□□□□ -0.32
DDB1-213ENST00000539332 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
DDB1-213ENST00000539332 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
DDB1-213ENST00000539332 C9orf84Q5VXU9 1444 aa13.04□□□□□ -0.32
DDB1-213ENST00000539332 TEX14Q8IWB6 1497 aa13.04□□□□□ -0.32
DDB1-213ENST00000539332 TSPY4P0CV99 314 aa13.03□□□□□ -0.32
DDB1-213ENST00000539332 TSPY10P0CW01 314 aa13.03□□□□□ -0.32
DDB1-213ENST00000539332 KCNA4P22459 653 aa13.02□□□□□ -0.32
DDB1-213ENST00000539332 NCOA1Q15788 1441 aa13.02□□□□□ -0.32
DDB1-213ENST00000539332 AFAP1Q8N556 730 aa13.02□□□□□ -0.33
DDB1-213ENST00000539332 RRP7BPQ9NSQ0 103 aa13.02□□□□□ -0.33
DDB1-213ENST00000539332 ZNF518AQ6AHZ1 1483 aa13.01□□□□□ -0.33
DDB1-213ENST00000539332 PLXNC1O60486 1568 aa13□□□□□ -0.33
DDB1-213ENST00000539332 POGZQ7Z3K3 1410 aa13□□□□□ -0.33
DDB1-213ENST00000539332 ANKRD30AQ9BXX3 1397 aa13□□□□□ -0.33
DDB1-213ENST00000539332 RICTORQ6R327 1708 aa13□□□□□ -0.33
DDB1-213ENST00000539332 KDM5CP41229 1560 aa12.99□□□□□ -0.33
DDB1-213ENST00000539332 ZFYVE16Q7Z3T8 1539 aa12.99□□□□□ -0.33
DDB1-213ENST00000539332 ACIN1Q9UKV3 1341 aaKnown RBP12.99□□□□□ -0.33
DDB1-213ENST00000539332 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
DDB1-213ENST00000539332 INO80Q9ULG1 1556 aaPredicted RBP12.98□□□□□ -0.33
DDB1-213ENST00000539332 DENND4BO75064 1496 aaPredicted RBP12.98□□□□□ -0.33
DDB1-213ENST00000539332 SPAG9O60271 1321 aaKnown RBP12.98□□□□□ -0.33
DDB1-213ENST00000539332 ATP7AQ04656 1500 aa12.97□□□□□ -0.33
DDB1-213ENST00000539332 RTEL1-TNFRSF6BF6WH68 1400 aa12.97□□□□□ -0.33
DDB1-213ENST00000539332 SCAF1Q9H7N4 1312 aaKnown RBP12.97□□□□□ -0.33
DDB1-213ENST00000539332 KIDINS220Q9ULH0 1771 aa12.97□□□□□ -0.33
DDB1-213ENST00000539332 KIF15Q9NS87 1388 aa12.96□□□□□ -0.33
DDB1-213ENST00000539332 RAPGEF3O95398 923 aa12.96□□□□□ -0.34
DDB1-213ENST00000539332 FRMPD1Q5SYB0 1578 aa12.96□□□□□ -0.34
DDB1-213ENST00000539332 HECW2Q9P2P5 1572 aa12.95□□□□□ -0.34
DDB1-213ENST00000539332 KDM5DQ9BY66 1539 aa12.94□□□□□ -0.34
DDB1-213ENST00000539332 MLH3Q9UHC1 1453 aa12.94□□□□□ -0.34
DDB1-213ENST00000539332 ANKRD50Q9ULJ7 1429 aa12.94□□□□□ -0.34
DDB1-213ENST00000539332 ZMYM4Q5VZL5 1548 aa12.92□□□□□ -0.34
DDB1-213ENST00000539332 DUOX2Q9NRD8 1548 aa12.92□□□□□ -0.34
DDB1-213ENST00000539332 COL17A1Q9UMD9 1497 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms