RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 SUPT6HQ7KZ85 1726 aaKnown RBP23.89■■□□□ 1.41
PRPF19-203ENST00000539180 ARHGAP5Q13017 1502 aa23.89■■□□□ 1.41
PRPF19-203ENST00000539180 ITSN2Q9NZM3 1697 aa23.87■■□□□ 1.41
PRPF19-203ENST00000539180 LRRC9Q6ZRR7 1453 aa23.86■■□□□ 1.41
PRPF19-203ENST00000539180 ABCC1P33527 1531 aa23.84■■□□□ 1.41
PRPF19-203ENST00000539180 ZMYM4Q5VZL5 1548 aa23.84■■□□□ 1.41
PRPF19-203ENST00000539180 GPATCH8Q9UKJ3 1502 aaKnown RBP23.84■■□□□ 1.41
PRPF19-203ENST00000539180 ADGRL1O94910 1474 aa23.84■■□□□ 1.41
PRPF19-203ENST00000539180 SAMD9LQ8IVG5 1584 aa23.82■■□□□ 1.4
PRPF19-203ENST00000539180 DENND4BO75064 1496 aaPredicted RBP23.81■■□□□ 1.4
PRPF19-203ENST00000539180 NCOA2Q15596 1464 aa23.81■■□□□ 1.4
PRPF19-203ENST00000539180 POGZQ7Z3K3 1410 aa23.8■■□□□ 1.4
PRPF19-203ENST00000539180 ARHGEF40Q8TER5 1519 aa23.79■■□□□ 1.4
PRPF19-203ENST00000539180 KDM5CP41229 1560 aa23.78■■□□□ 1.4
PRPF19-203ENST00000539180 EFCAB2Q5VUJ9 269 aa23.76■■□□□ 1.39
PRPF19-203ENST00000539180 SCAPERQ9BY12 1400 aa23.75■■□□□ 1.39
PRPF19-203ENST00000539180 CCNB3Q8WWL7 1395 aa23.74■■□□□ 1.39
PRPF19-203ENST00000539180 ARHGEF12Q9NZN5 1544 aa23.74■■□□□ 1.39
PRPF19-203ENST00000539180 RAPGEF3O95398 923 aa23.72■■□□□ 1.39
PRPF19-203ENST00000539180 SYCP2Q9BX26 1530 aa23.71■■□□□ 1.39
PRPF19-203ENST00000539180 ZNF518AQ6AHZ1 1483 aa23.71■■□□□ 1.39
PRPF19-203ENST00000539180 HECW2Q9P2P5 1572 aa23.69■■□□□ 1.38
PRPF19-203ENST00000539180 KANK4Q5T7N3 995 aaPredicted RBP23.69■■□□□ 1.38
PRPF19-203ENST00000539180 ZFYVE16Q7Z3T8 1539 aa23.69■■□□□ 1.38
PRPF19-203ENST00000539180 MAGI2Q86UL8 1455 aa23.68■■□□□ 1.38
PRPF19-203ENST00000539180 PLEKHH2Q8IVE3 1493 aa23.67■■□□□ 1.38
PRPF19-203ENST00000539180 KIAA1107Q9UPP5 1409 aa23.65■■□□□ 1.38
PRPF19-203ENST00000539180 TRAPPC8Q9Y2L5 1435 aa23.65■■□□□ 1.38
PRPF19-203ENST00000539180 SIGLEC1Q9BZZ2 1709 aa23.64■■□□□ 1.38
PRPF19-203ENST00000539180 YEATS2Q9ULM3 1422 aa23.63■■□□□ 1.37
PRPF19-203ENST00000539180 CAMSAP2Q08AD1 1489 aa23.62■■□□□ 1.37
PRPF19-203ENST00000539180 INO80Q9ULG1 1556 aaPredicted RBP23.62■■□□□ 1.37
PRPF19-203ENST00000539180 ABCA6Q8N139 1617 aa23.62■■□□□ 1.37
PRPF19-203ENST00000539180 DIP2CQ9Y2E4 1556 aa23.61■■□□□ 1.37
PRPF19-203ENST00000539180 KIDINS220Q9ULH0 1771 aa23.61■■□□□ 1.37
PRPF19-203ENST00000539180 CFDP1Q9UEE9 299 aaPredicted RBP23.61■■□□□ 1.37
PRPF19-203ENST00000539180 MLH3Q9UHC1 1453 aa23.61■■□□□ 1.37
PRPF19-203ENST00000539180 MYOM3Q5VTT5 1437 aa23.6■■□□□ 1.37
PRPF19-203ENST00000539180 MBD5Q9P267 1494 aa23.59■■□□□ 1.37
PRPF19-203ENST00000539180 REREQ9P2R6 1566 aa23.58■■□□□ 1.37
PRPF19-203ENST00000539180 APLP2Q06481 763 aa23.58■■□□□ 1.37
PRPF19-203ENST00000539180 MIA2Q96PC5 1412 aa23.57■■□□□ 1.36
PRPF19-203ENST00000539180 ARHGEF5Q12774 1597 aa23.57■■□□□ 1.36
PRPF19-203ENST00000539180 BCORL1Q5H9F3 1711 aa23.54■■□□□ 1.36
PRPF19-203ENST00000539180 ZNF777Q9ULD5 760 aaPredicted RBP23.54■■□□□ 1.36
PRPF19-203ENST00000539180 ATP7AQ04656 1500 aa23.54■■□□□ 1.36
PRPF19-203ENST00000539180 AFAP1Q8N556 730 aa23.53■■□□□ 1.36
PRPF19-203ENST00000539180 ZNF644Q9H582 1327 aaPredicted RBP23.53■■□□□ 1.36
PRPF19-203ENST00000539180 PTPN23Q9H3S7 1636 aa23.51■■□□□ 1.35
PRPF19-203ENST00000539180 C9orf84Q5VXU9 1444 aa23.51■■□□□ 1.35
PRPF19-203ENST00000539180 CCDC141Q6ZP82 1450 aa23.51■■□□□ 1.35
PRPF19-203ENST00000539180 ADAMTSL3P82987 1691 aa23.51■■□□□ 1.35
PRPF19-203ENST00000539180 ATP10AO60312 1499 aa23.49■■□□□ 1.35
PRPF19-203ENST00000539180 CROCC2H7BZ55 1655 aa23.49■■□□□ 1.35
PRPF19-203ENST00000539180 TCOF1Q13428 1488 aaKnown RBP23.49■■□□□ 1.35
PRPF19-203ENST00000539180 FGD6Q6ZV73 1430 aa23.48■■□□□ 1.35
PRPF19-203ENST00000539180 KDM4FA0A1W2PPD8 638 aa23.47■■□□□ 1.35
PRPF19-203ENST00000539180 HNRNPMP52272 730 aaKnown RBP eCLIP23.47■■□□□ 1.35
PRPF19-203ENST00000539180 PLXNC1O60486 1568 aa23.47■■□□□ 1.35
PRPF19-203ENST00000539180 MAST1Q9Y2H9 1570 aa23.47■■□□□ 1.35
PRPF19-203ENST00000539180 ADGBQ8N7X0 1667 aa23.47■■□□□ 1.35
PRPF19-203ENST00000539180 AGLP35573 1532 aa23.43■■□□□ 1.34
PRPF19-203ENST00000539180 MADDQ8WXG6 1647 aa23.43■■□□□ 1.34
PRPF19-203ENST00000539180 RTEL1-TNFRSF6BF6WH68 1400 aa23.42■■□□□ 1.34
PRPF19-203ENST00000539180 DNMT1P26358 1616 aaKnown RBP23.42■■□□□ 1.34
PRPF19-203ENST00000539180 SPAG9O60271 1321 aaKnown RBP23.4■■□□□ 1.34
PRPF19-203ENST00000539180 SHANK2Q9UPX8 1470 aa23.38■■□□□ 1.33
PRPF19-203ENST00000539180 FER1L4A9Z1Z3 1794 aa23.38■■□□□ 1.33
PRPF19-203ENST00000539180 RIMS1Q86UR5 1692 aaKnown RBP23.35■■□□□ 1.33
PRPF19-203ENST00000539180 RSPH4AQ5TD94 716 aa23.35■■□□□ 1.33
PRPF19-203ENST00000539180 A2MP01023 1474 aa23.35■■□□□ 1.33
PRPF19-203ENST00000539180 ABCC5O15440 1437 aa23.33■■□□□ 1.32
PRPF19-203ENST00000539180 DAPK1P53355 1430 aa23.33■■□□□ 1.32
PRPF19-203ENST00000539180 MYT1LQ9UL68 1186 aa23.3■■□□□ 1.32
PRPF19-203ENST00000539180 ARID4BQ4LE39 1312 aaPredicted RBP23.3■■□□□ 1.32
PRPF19-203ENST00000539180 PTPRMP28827 1452 aa23.28■■□□□ 1.32
PRPF19-203ENST00000539180 EIF2AK4Q9P2K8 1649 aaKnown RBP23.26■■□□□ 1.31
PRPF19-203ENST00000539180 DHX29Q7Z478 1369 aaKnown RBP23.23■■□□□ 1.31
PRPF19-203ENST00000539180 ADGRL2O95490 1459 aa23.23■■□□□ 1.31
PRPF19-203ENST00000539180 RNF17Q9BXT8 1623 aaKnown RBP23.22■■□□□ 1.31
PRPF19-203ENST00000539180 MROH2AA6NES4 1674 aa23.22■■□□□ 1.31
PRPF19-203ENST00000539180 RRBP1Q9P2E9 1410 aaKnown RBP23.22■■□□□ 1.31
PRPF19-203ENST00000539180 TSPY4P0CV99 314 aa23.21■■□□□ 1.31
PRPF19-203ENST00000539180 TSPY10P0CW01 314 aa23.21■■□□□ 1.31
PRPF19-203ENST00000539180 DUOX2Q9NRD8 1548 aa23.2■■□□□ 1.3
PRPF19-203ENST00000539180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.2■■□□□ 1.3
PRPF19-203ENST00000539180 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
PRPF19-203ENST00000539180 PPARGC1BQ86YN6 1023 aaKnown RBP23.2■■□□□ 1.3
PRPF19-203ENST00000539180 FAM135AQ9P2D6 1515 aa23.18■■□□□ 1.3
PRPF19-203ENST00000539180 C3P01024 1663 aa23.18■■□□□ 1.3
PRPF19-203ENST00000539180 MROH1Q8NDA8 1641 aa23.18■■□□□ 1.3
PRPF19-203ENST00000539180 MLECQ14165 292 aa23.17■■□□□ 1.3
PRPF19-203ENST00000539180 CLTCQ00610 1675 aaKnown RBP23.16■■□□□ 1.3
PRPF19-203ENST00000539180 PTPRKQ15262 1439 aa23.15■■□□□ 1.3
PRPF19-203ENST00000539180 DEPDC5O75140 1603 aa23.15■■□□□ 1.3
PRPF19-203ENST00000539180 KIF15Q9NS87 1388 aa23.14■■□□□ 1.3
PRPF19-203ENST00000539180 ERBINQ96RT1 1412 aa23.14■■□□□ 1.29
PRPF19-203ENST00000539180 CNTLNQ9NXG0 1405 aa23.14■■□□□ 1.29
PRPF19-203ENST00000539180 FAM50AQ14320 339 aaKnown RBP23.13■■□□□ 1.29
PRPF19-203ENST00000539180 NCOA1Q15788 1441 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms